Literature DB >> 21577698

Aqua-{6,6'-dimeth-oxy-2,2'-[ethane-1,2-diylbis(nitrilo-methyl-idyne)]diphenolato}nickel(II).

Zhenghua Guo1, Lianzhi Li, Tao Xu, Jinghong Li, Daqi Wang.   

Abstract

The title complex, [Ni(C(18)H(18)N(2)O(4))(H(2)O)], lies on a mirror plane with the Ni(II) ion coordinated by two N and two O atoms of a tetra-dentate Schiff base ligand and one water O atom in a distorted square-pyramidal enviroment. The -CH(2)-CH(2)- group of the ligand is disordered equally over two sites about the mirror plane. The dihedral angle between the mean planes of the two symmetry-related chelate rings is 37.16 (6)°. In the crystal structure, inter-molecular O-H⋯O hydrogen bonds link complex mol-ecules into one-dimensional chains along [100] and these chains are linked, in turn, by very weak inter-molecular C-H⋯O hydrogen bonds into a two-dimensional network.

Entities:  

Year:  2009        PMID: 21577698      PMCID: PMC2970327          DOI: 10.1107/S1600536809034278

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to Schiff base complexes, see: Akine et al. (2005 ▶); Gamovski et al. (1993 ▶); Garg & Kumar (2003 ▶); Tarafder et al. (2002 ▶); Yang et al. (2000 ▶). For a related crystal structure, see: Wang et al. (2007 ▶).

Experimental

Crystal data

[Ni(C18H18N2O4)(H2O)] M = 403.07 Orthorhombic, a = 9.2712 (11) Å b = 24.763 (3) Å c = 7.5185 (10) Å V = 1726.1 (4) Å3 Z = 4 Mo Kα radiation μ = 1.16 mm−1 T = 298 K 0.48 × 0.42 × 0.26 mm

Data collection

Bruker SMART 1000 CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.607, T max = 0.753 7520 measured reflections 1550 independent reflections 1368 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.078 S = 1.19 1550 reflections 131 parameters H-atom parameters constrained Δρmax = 0.16 e Å−3 Δρmin = −0.53 e Å−3 Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809034278/lh2877sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809034278/lh2877Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C18H18N2O4)(H2O)]F(000) = 840
Mr = 403.07Dx = 1.551 Mg m3
Orthorhombic, PnmaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2nCell parameters from 3742 reflections
a = 9.2712 (11) Åθ = 2.5–27.9°
b = 24.763 (3) ŵ = 1.16 mm1
c = 7.5185 (10) ÅT = 298 K
V = 1726.1 (4) Å3Block, green
Z = 40.48 × 0.42 × 0.26 mm
Bruker SMART 1000 CCD area-detector diffractometer1550 independent reflections
Radiation source: fine-focus sealed tube1368 reflections with I > 2σ(I)
graphiteRint = 0.029
φ and ω scansθmax = 25.0°, θmin = 1.6°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −11→11
Tmin = 0.607, Tmax = 0.753k = −29→27
7520 measured reflectionsl = −5→8
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.031Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.078H-atom parameters constrained
S = 1.19w = 1/[σ2(Fo2) + (0.0321P)2 + 0.8008P] where P = (Fo2 + 2Fc2)/3
1550 reflections(Δ/σ)max = 0.001
131 parametersΔρmax = 0.16 e Å3
0 restraintsΔρmin = −0.53 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Ni10.42518 (4)0.75000.52345 (5)0.03327 (16)
N10.5687 (2)0.69791 (9)0.4405 (3)0.0577 (6)
O10.28010 (18)0.69435 (6)0.5505 (2)0.0442 (4)
O20.04869 (19)0.63591 (7)0.5874 (3)0.0602 (5)
O30.5119 (2)0.75000.8191 (3)0.0477 (6)
H30.55680.72240.85690.057*
C10.5493 (3)0.64757 (11)0.4103 (4)0.0545 (7)
H10.62730.62820.36570.065*
C20.4180 (3)0.61846 (10)0.4391 (3)0.0451 (6)
C30.2919 (3)0.64343 (9)0.5057 (3)0.0402 (6)
C40.1686 (3)0.60950 (10)0.5265 (3)0.0460 (6)
C50.1735 (3)0.55512 (11)0.4884 (4)0.0587 (8)
H50.09190.53390.50550.070*
C60.2999 (4)0.53165 (11)0.4244 (4)0.0675 (9)
H60.30250.49500.39840.081*
C70.4188 (3)0.56250 (11)0.4003 (4)0.0592 (7)
H70.50280.54660.35740.071*
C8−0.0821 (3)0.60639 (13)0.5993 (4)0.0647 (8)
H8A−0.10420.59080.48550.097*
H8B−0.15870.63020.63440.097*
H8C−0.07190.57820.68590.097*
C90.7178 (7)0.7189 (3)0.4502 (9)0.0473 (14)0.50
H9A0.78670.69570.39010.057*0.50
H9B0.74790.72460.57230.057*0.50
C100.6943 (7)0.7720 (3)0.3518 (9)0.0544 (17)0.50
H10A0.78100.79390.35740.065*0.50
H10B0.67260.76500.22780.065*0.50
U11U22U33U12U13U23
Ni10.0290 (2)0.0330 (2)0.0378 (3)0.0000.00299 (18)0.000
N10.0405 (12)0.0549 (14)0.0778 (16)−0.0030 (10)0.0128 (12)−0.0225 (12)
O10.0373 (9)0.0355 (9)0.0597 (11)−0.0010 (7)0.0046 (8)−0.0087 (8)
O20.0454 (11)0.0488 (11)0.0864 (14)−0.0098 (9)0.0128 (10)−0.0104 (10)
O30.0477 (14)0.0425 (13)0.0530 (15)0.000−0.0102 (12)0.000
C10.0427 (15)0.0547 (17)0.0660 (18)0.0056 (13)0.0070 (13)−0.0214 (14)
C20.0498 (15)0.0426 (14)0.0428 (14)0.0031 (12)0.0001 (12)−0.0074 (11)
C30.0437 (14)0.0385 (13)0.0386 (13)0.0008 (11)−0.0034 (11)−0.0022 (10)
C40.0468 (15)0.0422 (14)0.0492 (15)−0.0034 (11)0.0006 (12)−0.0051 (11)
C50.0609 (18)0.0424 (15)0.073 (2)−0.0111 (13)0.0024 (15)−0.0039 (13)
C60.081 (2)0.0335 (14)0.088 (2)0.0001 (15)0.0074 (19)−0.0114 (14)
C70.0620 (18)0.0454 (15)0.0703 (19)0.0081 (14)0.0064 (15)−0.0127 (14)
C80.0517 (17)0.075 (2)0.0676 (19)−0.0234 (15)0.0137 (15)−0.0146 (16)
C90.035 (3)0.051 (3)0.056 (4)0.005 (2)0.000 (3)−0.012 (3)
C100.036 (3)0.062 (4)0.065 (4)−0.001 (3)0.011 (3)0.010 (3)
Ni1—O11.9364 (16)C5—C61.393 (4)
Ni1—O1i1.9364 (16)C5—H50.9300
Ni1—N1i1.956 (2)C6—C71.353 (4)
Ni1—N11.956 (2)C6—H60.9300
Ni1—O32.363 (2)C7—H70.9300
N1—C11.280 (3)C8—H8A0.9600
N1—C91.479 (7)C8—H8B0.9600
N1—C10i1.535 (7)C8—H8C0.9600
O1—C31.310 (3)C9—C10i0.803 (7)
O2—C41.369 (3)C9—C101.525 (7)
O2—C81.419 (3)C9—C9i1.541 (13)
O3—H30.8501C9—H9A0.9700
C1—C21.431 (4)C9—H9B0.9700
C1—H10.9300C10—C9i0.803 (7)
C2—C31.414 (3)C10—C10i1.092 (13)
C2—C71.416 (4)C10—N1i1.535 (7)
C3—C41.428 (3)C10—H10A0.9700
C4—C51.377 (4)C10—H10B0.9700
O1—Ni1—O1i90.74 (10)C6—C7—H7119.3
O1—Ni1—N1i167.34 (9)C2—C7—H7119.3
O1i—Ni1—N1i92.11 (8)O2—C8—H8A109.5
O1—Ni1—N192.11 (8)O2—C8—H8B109.5
O1i—Ni1—N1167.34 (9)H8A—C8—H8B109.5
N1i—Ni1—N182.55 (14)O2—C8—H8C109.5
O1—Ni1—O397.90 (7)H8A—C8—H8C109.5
O1i—Ni1—O397.90 (7)H8B—C8—H8C109.5
N1i—Ni1—O393.93 (9)C10i—C9—N178.4 (8)
N1—Ni1—O393.93 (9)C10i—C9—C1043.4 (8)
C1—N1—C9118.9 (3)N1—C9—C1098.4 (5)
C1—N1—C10i120.1 (3)C10i—C9—C9i73.8 (8)
C9—N1—C10i30.8 (3)N1—C9—C9i110.6 (3)
C1—N1—Ni1127.10 (19)C10—C9—C9i30.4 (3)
C9—N1—Ni1112.9 (3)C10i—C9—H9A85.1
C10i—N1—Ni1109.6 (3)N1—C9—H9A112.6
C3—O1—Ni1126.86 (15)C10—C9—H9A112.2
C4—O2—C8118.0 (2)C9i—C9—H9A126.2
Ni1—O3—H3118.8C10i—C9—H9B155.4
N1—C1—C2125.7 (2)N1—C9—H9B111.5
N1—C1—H1117.2C10—C9—H9B112.0
C2—C1—H1117.2C9i—C9—H9B81.6
C3—C2—C7120.3 (2)H9A—C9—H9B109.8
C3—C2—C1122.4 (2)C9i—C10—C10i106.2 (8)
C7—C2—C1117.2 (2)C9i—C10—C975.9 (9)
O1—C3—C2125.5 (2)C10i—C10—C930.4 (3)
O1—C3—C4118.1 (2)C9i—C10—N1i70.7 (8)
C2—C3—C4116.3 (2)C10i—C10—N1i119.0 (3)
O2—C4—C5124.3 (2)C9—C10—N1i108.4 (5)
O2—C4—C3113.9 (2)C9i—C10—H10A65.1
C5—C4—C3121.7 (3)C10i—C10—H10A124.0
C4—C5—C6120.5 (3)C9—C10—H10A110.1
C4—C5—H5119.8N1i—C10—H10A109.8
C6—C5—H5119.8C9i—C10—H10B172.9
C7—C6—C5119.7 (3)C10i—C10—H10B79.6
C7—C6—H6120.1C9—C10—H10B109.9
C5—C6—H6120.1N1i—C10—H10B110.4
C6—C7—C2121.4 (3)H10A—C10—H10B108.4
O1—Ni1—N1—C14.5 (3)C8—O2—C4—C5−5.1 (4)
O1i—Ni1—N1—C1−98.3 (4)C8—O2—C4—C3175.3 (2)
N1i—Ni1—N1—C1−163.9 (2)O1—C3—C4—O22.0 (3)
O3—Ni1—N1—C1102.6 (3)C2—C3—C4—O2−178.5 (2)
O1—Ni1—N1—C9−162.9 (3)O1—C3—C4—C5−177.7 (2)
O1i—Ni1—N1—C994.2 (5)C2—C3—C4—C51.8 (4)
N1i—Ni1—N1—C928.6 (4)O2—C4—C5—C6179.1 (3)
O3—Ni1—N1—C9−64.8 (3)C3—C4—C5—C6−1.3 (4)
O1—Ni1—N1—C10i164.1 (3)C4—C5—C6—C70.3 (5)
O1i—Ni1—N1—C10i61.3 (5)C5—C6—C7—C20.1 (5)
N1i—Ni1—N1—C10i−4.3 (3)C3—C2—C7—C60.5 (5)
O3—Ni1—N1—C10i−97.8 (3)C1—C2—C7—C6179.6 (3)
O1i—Ni1—O1—C3162.41 (15)C1—N1—C9—C10i101.3 (8)
N1i—Ni1—O1—C359.4 (4)Ni1—N1—C9—C10i−90.2 (8)
N1—Ni1—O1—C3−5.2 (2)C1—N1—C9—C10140.0 (4)
O3—Ni1—O1—C3−99.51 (19)C10i—N1—C9—C1038.8 (7)
C9—N1—C1—C2163.8 (4)Ni1—N1—C9—C10−51.4 (4)
C10i—N1—C1—C2−160.6 (4)C1—N1—C9—C9i168.8 (2)
Ni1—N1—C1—C2−2.9 (5)C10i—N1—C9—C9i67.6 (8)
N1—C1—C2—C30.2 (5)Ni1—N1—C9—C9i−22.6 (3)
N1—C1—C2—C7−178.9 (3)C10i—C9—C10—C9i180.000 (4)
Ni1—O1—C3—C24.5 (3)N1—C9—C10—C9i116.8 (6)
Ni1—O1—C3—C4−176.08 (17)N1—C9—C10—C10i−63.2 (6)
C7—C2—C3—O1178.0 (3)C9i—C9—C10—C10i180.000 (10)
C1—C2—C3—O1−1.0 (4)C10i—C9—C10—N1i116.3 (6)
C7—C2—C3—C4−1.4 (4)N1—C9—C10—N1i53.1 (4)
C1—C2—C3—C4179.5 (2)C9i—C9—C10—N1i−63.7 (6)
D—H···AD—HH···AD···AD—H···A
O3—H3···O1ii0.852.293.007 (3)142
O3—H3···O2ii0.852.182.9313 (19)147
C10—H10B···O1iii0.972.533.236 (7)130
C9—H9B···O3ii0.972.663.322 (7)126
Ni1—O11.9364 (16)
Ni1—N11.956 (2)
Ni1—O32.363 (2)
O1—Ni1—O1i90.74 (10)
O1—Ni1—N1i167.34 (9)
O1—Ni1—N192.11 (8)
N1i—Ni1—N182.55 (14)
O1—Ni1—O397.90 (7)
N1—Ni1—O393.93 (9)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3⋯O1ii0.852.293.007 (3)142
O3—H3⋯O2ii0.852.182.9313 (19)147
C10—H10B⋯O1iii0.972.533.236 (7)130
C9—H9B⋯O3ii0.972.663.322 (7)126

Symmetry codes: (ii) ; (iii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Spectral studies of complexes of nickel(II) with tetradentate schiff bases having N2O2 donor groups.

Authors:  B S Garg; Deo Nandan Kumar
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2003-01-15       Impact factor: 4.098

3.  Oxime-based salen-type tetradentate ligands with high stability against imine metathesis reaction.

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