| Literature DB >> 21577678 |
Aouatef Cherouana, Raja Bousboua, Lamia Bendjeddou, Slimane Dahaoui, Claude Lecomte.
Abstract
In the title compound, C(5)H(6)N(5) (+)·C(4)H(6)N(3)O(+)·SO(4) (2-), the adeninium (AdH(+)) and cytosinium (CytH(+)) cations and sulfate dianion are involved in a three-dimensional hydrogen-bonding network with four different modes, viz. AdH(+)⋯AdH(+), AdH(+)⋯CytH(+), AdH(+)⋯SO(4) (2-) and CytH(+)⋯SO(4) (2-). The adeninium cations form N-H⋯N dimers through the Hoogsteen faces, generating a characteristic R(2) (2)(10) motif. This AdH(+)⋯AdH(+) hydrogen bond in combination with AdH(+)⋯CytH(+ )H-bonds leads to two-dimensional cationic ribbons parallel to the a axis. The sulfate anions inter-link the ribbons into a three-dimensional hydrogen-bonding network and thus reinforce the crystal structure.Entities:
Year: 2009 PMID: 21577678 PMCID: PMC2969916 DOI: 10.1107/S1600536809034023
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C5H6N5+·C4H6N3O+·SO42− | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 57856 reflections |
| θ = 3.1–35.0° | |
| µ = 0.29 mm−1 | |
| β = 99.356 (2)° | Prism, colourless |
| 0.39 × 0.26 × 0.12 mm | |
| Oxford Diffraction Xcalibur Saphire2 CCD diffractometer | 5843 independent reflections |
| Radiation source: fine-focus sealed tube | 5061 reflections with |
| graphite | |
| φ and ω scans | θmax = 35.0°, θmin = 3.1° |
| Absorption correction: analytical ( | |
| 57856 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: difference Fourier map | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 5843 reflections | (Δ/σ)max = 0.001 |
| 232 parameters | Δρmax = 0.51 e Å−3 |
| 8 restraints | Δρmin = −0.51 e Å−3 |
| Experimental. CrysAlis RED (Oxford Diffraction, 2008) Analytical numeric absorption correction using a multifaceted crystal model based on expressions derived by R.C. Clark & J.S. Reid. |
| Geometry. Bond distances, angles |
| Refinement. Refinement of |
| N1A | 0.89503 (7) | 0.08114 (5) | 0.15030 (6) | 0.0102 (1) | |
| N2A | 0.93054 (8) | −0.04224 (5) | 0.30191 (6) | 0.0114 (2) | |
| N3A | 0.92695 (7) | 0.26232 (5) | 0.17622 (6) | 0.0113 (2) | |
| N7A | 1.01108 (7) | 0.14551 (5) | 0.46688 (6) | 0.0097 (1) | |
| N9A | 1.00189 (7) | 0.30483 (5) | 0.38697 (6) | 0.0106 (2) | |
| C2A | 0.89521 (8) | 0.18034 (6) | 0.10957 (7) | 0.0113 (2) | |
| C4A | 0.96300 (8) | 0.23844 (5) | 0.29397 (6) | 0.0091 (2) | |
| C5A | 0.96826 (7) | 0.14027 (5) | 0.34460 (6) | 0.0083 (2) | |
| C6A | 0.93243 (7) | 0.05505 (5) | 0.26787 (6) | 0.0087 (1) | |
| C8A | 1.02951 (8) | 0.24570 (5) | 0.48772 (7) | 0.0106 (2) | |
| O5C | 0.58498 (6) | 0.24982 (4) | 0.27802 (5) | 0.0133 (2) | |
| N1C | 0.59982 (7) | 0.08175 (5) | 0.33878 (6) | 0.0100 (1) | |
| N2C | 0.76585 (7) | 0.18374 (5) | 0.67114 (6) | 0.0107 (2) | |
| N3C | 0.67261 (7) | 0.21469 (5) | 0.47342 (6) | 0.0092 (1) | |
| C2C | 0.61681 (8) | 0.18570 (5) | 0.35794 (7) | 0.0093 (2) | |
| C4C | 0.71397 (7) | 0.14707 (5) | 0.56532 (7) | 0.0085 (2) | |
| C5C | 0.69956 (8) | 0.03932 (5) | 0.54009 (7) | 0.0100 (2) | |
| C6C | 0.64100 (8) | 0.01083 (5) | 0.42725 (7) | 0.0102 (2) | |
| S1 | 0.27538 (2) | 0.03329 (1) | 0.11795 (2) | 0.0083 (1) | |
| O1 | 0.19268 (7) | −0.06314 (4) | 0.12530 (5) | 0.0137 (2) | |
| O2 | 0.24941 (6) | 0.10652 (4) | 0.21156 (5) | 0.0119 (1) | |
| O3 | 0.43624 (6) | 0.01038 (4) | 0.13141 (5) | 0.0122 (1) | |
| O4 | 0.22552 (6) | 0.07936 (4) | −0.00242 (5) | 0.0115 (1) | |
| H1A | 0.8721 (13) | 0.0315 (8) | 0.0979 (9) | 0.0123* | |
| H2A | 0.87069 | 0.19049 | 0.02747 | 0.0135* | |
| H3A | 0.9548 (13) | −0.0569 (10) | 0.3778 (8) | 0.0136* | |
| H4A | 0.9167 (13) | −0.0894 (8) | 0.2481 (9) | 0.0136* | |
| H8A | 1.05853 | 0.27310 | 0.56380 | 0.0127* | |
| H9A | 1.0154 (13) | 0.3714 (6) | 0.3849 (11) | 0.0127* | |
| H1C | 0.5516 (12) | 0.0640 (9) | 0.2698 (8) | 0.0120* | |
| H2C | 0.7866 (13) | 0.1437 (9) | 0.7326 (9) | 0.0129* | |
| H3C | 0.6899 (12) | 0.2814 (6) | 0.4829 (10) | 0.0111* | |
| H4C | 0.7671 (12) | 0.2495 (6) | 0.6843 (10) | 0.0129* | |
| H5C | 0.72934 | −0.00972 | 0.59907 | 0.0120* | |
| H6C | 0.62847 | −0.05905 | 0.40948 | 0.0122* |
| N1A | 0.0133 (2) | 0.0090 (2) | 0.0078 (3) | −0.0006 (2) | −0.0001 (2) | −0.0007 (2) |
| N2A | 0.0175 (3) | 0.0066 (2) | 0.0096 (3) | −0.0002 (2) | 0.0010 (2) | −0.0009 (2) |
| N3A | 0.0146 (3) | 0.0097 (2) | 0.0088 (3) | −0.0012 (2) | −0.0001 (2) | 0.0010 (2) |
| N7A | 0.0122 (2) | 0.0085 (2) | 0.0080 (3) | −0.0007 (2) | 0.0007 (2) | −0.0006 (2) |
| N9A | 0.0145 (3) | 0.0070 (2) | 0.0098 (3) | −0.0019 (2) | 0.0008 (2) | −0.0005 (2) |
| C2A | 0.0141 (3) | 0.0104 (3) | 0.0087 (3) | −0.0007 (2) | −0.0002 (2) | 0.0012 (2) |
| C4A | 0.0107 (3) | 0.0076 (3) | 0.0089 (3) | −0.0010 (2) | 0.0009 (2) | −0.0001 (2) |
| C5A | 0.0101 (3) | 0.0070 (2) | 0.0077 (3) | −0.0005 (2) | 0.0010 (2) | −0.0002 (2) |
| C6A | 0.0097 (2) | 0.0080 (2) | 0.0082 (3) | 0.0002 (2) | 0.0010 (2) | −0.0002 (2) |
| C8A | 0.0133 (3) | 0.0093 (3) | 0.0089 (3) | −0.0015 (2) | 0.0006 (2) | −0.0006 (2) |
| O5C | 0.0198 (3) | 0.0095 (2) | 0.0093 (3) | 0.0003 (2) | −0.0017 (2) | 0.0021 (2) |
| N1C | 0.0126 (2) | 0.0077 (2) | 0.0088 (3) | −0.0007 (2) | −0.0013 (2) | −0.0008 (2) |
| N2C | 0.0144 (3) | 0.0091 (2) | 0.0079 (3) | −0.0005 (2) | −0.0006 (2) | 0.0002 (2) |
| N3C | 0.0127 (2) | 0.0064 (2) | 0.0078 (3) | −0.0001 (2) | −0.0007 (2) | 0.0001 (2) |
| C2C | 0.0103 (3) | 0.0081 (3) | 0.0089 (3) | −0.0001 (2) | 0.0002 (2) | −0.0002 (2) |
| C4C | 0.0089 (2) | 0.0082 (3) | 0.0084 (3) | 0.0000 (2) | 0.0011 (2) | 0.0009 (2) |
| C5C | 0.0116 (3) | 0.0072 (3) | 0.0106 (3) | −0.0002 (2) | 0.0004 (2) | 0.0009 (2) |
| C6C | 0.0113 (3) | 0.0075 (3) | 0.0116 (3) | −0.0007 (2) | 0.0013 (2) | 0.0003 (2) |
| S1 | 0.0115 (1) | 0.0059 (1) | 0.0067 (1) | 0.0002 (1) | −0.0008 (1) | 0.0003 (1) |
| O1 | 0.0199 (3) | 0.0090 (2) | 0.0111 (3) | −0.0048 (2) | −0.0008 (2) | 0.0018 (2) |
| O2 | 0.0167 (2) | 0.0094 (2) | 0.0097 (3) | 0.0013 (2) | 0.0025 (2) | −0.0014 (2) |
| O3 | 0.0123 (2) | 0.0111 (2) | 0.0122 (3) | 0.0025 (2) | −0.0013 (2) | −0.0024 (2) |
| O4 | 0.0174 (2) | 0.0083 (2) | 0.0076 (2) | 0.0005 (2) | −0.0016 (2) | 0.0019 (2) |
| S1—O1 | 1.4706 (10) | N1C—C6C | 1.3665 (12) |
| S1—O2 | 1.4706 (10) | N1C—C2C | 1.3682 (12) |
| S1—O3 | 1.4895 (10) | N2C—C4C | 1.3052 (12) |
| S1—O4 | 1.4905 (10) | N3C—C4C | 1.3660 (12) |
| O5C—C2C | 1.2281 (11) | N3C—C2C | 1.3772 (13) |
| N1A—C2A | 1.3649 (13) | N1C—H1C | 0.864 (9) |
| N1A—C6A | 1.3628 (12) | N2C—H4C | 0.864 (8) |
| N2A—C6A | 1.3184 (12) | N2C—H2C | 0.864 (11) |
| N3A—C2A | 1.3077 (12) | N3C—H3C | 0.882 (8) |
| N3A—C4A | 1.3568 (12) | C4A—C5A | 1.3921 (12) |
| N7A—C8A | 1.3245 (12) | C5A—C6A | 1.4101 (12) |
| N7A—C5A | 1.3787 (12) | C2A—H2A | 0.9300 |
| N9A—C4A | 1.3616 (12) | C8A—H8A | 0.9300 |
| N9A—C8A | 1.3634 (12) | C4C—C5C | 1.4260 (12) |
| N1A—H1A | 0.877 (10) | C5C—C6C | 1.3548 (13) |
| N2A—H4A | 0.858 (10) | C5C—H5C | 0.9300 |
| N2A—H3A | 0.873 (9) | C6C—H6C | 0.9300 |
| N9A—H9A | 0.872 (8) | ||
| O1—S1—O4 | 107.88 (3) | N3A—C4A—C5A | 126.85 (6) |
| O1—S1—O2 | 111.16 (3) | N3A—C4A—N9A | 127.46 (6) |
| O1—S1—O3 | 109.72 (3) | N9A—C4A—C5A | 105.70 (6) |
| O3—S1—O4 | 108.98 (3) | N7A—C5A—C4A | 110.74 (6) |
| O2—S1—O3 | 109.20 (3) | N7A—C5A—C6A | 131.12 (6) |
| O2—S1—O4 | 109.87 (3) | C4A—C5A—C6A | 118.14 (6) |
| C2A—N1A—C6A | 123.35 (6) | N1A—C6A—N2A | 120.63 (6) |
| C2A—N3A—C4A | 112.24 (6) | N2A—C6A—C5A | 125.47 (6) |
| C5A—N7A—C8A | 103.57 (6) | N1A—C6A—C5A | 113.89 (6) |
| C4A—N9A—C8A | 106.43 (6) | N7A—C8A—N9A | 113.57 (7) |
| C2A—N1A—H1A | 118.3 (7) | N3A—C2A—H2A | 117.00 |
| C6A—N1A—H1A | 118.3 (7) | N1A—C2A—H2A | 117.00 |
| H3A—N2A—H4A | 122.0 (11) | N7A—C8A—H8A | 123.00 |
| C6A—N2A—H3A | 118.8 (8) | N9A—C8A—H8A | 123.00 |
| C6A—N2A—H4A | 118.7 (7) | O5C—C2C—N3C | 121.54 (6) |
| C4A—N9A—H9A | 128.6 (8) | O5C—C2C—N1C | 122.74 (7) |
| C8A—N9A—H9A | 124.7 (8) | N1C—C2C—N3C | 115.72 (6) |
| C2C—N1C—C6C | 122.27 (7) | N2C—C4C—N3C | 118.78 (6) |
| C2C—N3C—C4C | 124.30 (6) | N2C—C4C—C5C | 123.24 (7) |
| C6C—N1C—H1C | 121.6 (8) | N3C—C4C—C5C | 117.98 (7) |
| C2C—N1C—H1C | 115.7 (8) | C4C—C5C—C6C | 117.72 (7) |
| C4C—N2C—H2C | 121.4 (7) | N1C—C6C—C5C | 121.94 (6) |
| H2C—N2C—H4C | 117.2 (10) | C4C—C5C—H5C | 121.00 |
| C4C—N2C—H4C | 120.6 (7) | C6C—C5C—H5C | 121.00 |
| C2C—N3C—H3C | 114.5 (7) | C5C—C6C—H6C | 119.00 |
| C4C—N3C—H3C | 120.9 (7) | N1C—C6C—H6C | 119.00 |
| N1A—C2A—N3A | 125.53 (7) |
| H··· | ||||
| N1A—H1A···O1i | 0.877 (10) | 2.535 (10) | 3.1036 (19) | 123.3 (8) |
| N1A—H1A···O4i | 0.877 (10) | 1.928 (11) | 2.7833 (17) | 164.5 (11) |
| N1C—H1C···O3 | 0.864 (9) | 1.877 (10) | 2.7350 (17) | 172.0 (11) |
| N2C—H2C···O1ii | 0.864 (11) | 1.902 (11) | 2.7596 (17) | 171.8 (11) |
| N2A—H3A···N7Aiii | 0.873 (9) | 2.081 (10) | 2.9118 (18) | 158.7 (12) |
| N3C—H3C···O4iv | 0.882 (8) | 1.835 (8) | 2.7164 (17) | 178.2 (11) |
| N2A—H4A···O5Cv | 0.858 (10) | 2.102 (10) | 2.8368 (18) | 143.3 (9) |
| N2C—H4C···O2iv | 0.864 (8) | 1.901 (8) | 2.7622 (17) | 174.4 (11) |
| N9A—H9A···O3vi | 0.872 (8) | 1.870 (8) | 2.7364 (17) | 172.5 (12) |
| C2A—H2A···O1i | 0.9300 | 2.3900 | 3.0553 (19) | 128.00 |
| C5C—H5C···O2ii | 0.9300 | 2.4600 | 3.357 (2) | 161.00 |
| C6C—H6C···N3Av | 0.9300 | 2.5300 | 3.447 (2) | 170.00 |
| C8A—H8A···O5Civ | 0.9300 | 2.4200 | 3.245 (2) | 148.00 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1 | 0.877 (10) | 2.535 (10) | 3.1036 (19) | 123.3 (8) |
| N1 | 0.877 (10) | 1.928 (11) | 2.7833 (17) | 164.5 (11) |
| N1 | 0.864 (9) | 1.877 (10) | 2.7350 (17) | 172.0 (11) |
| N2 | 0.864 (11) | 1.902 (11) | 2.7596 (17) | 171.8 (11) |
| N2 | 0.873 (9) | 2.081 (10) | 2.9118 (18) | 158.7 (12) |
| N3 | 0.882 (8) | 1.835 (8) | 2.7164 (17) | 178.2 (11) |
| N2 | 0.858 (10) | 2.102 (10) | 2.8368 (18) | 143.3 (9) |
| N2 | 0.864 (8) | 1.901 (8) | 2.7622 (17) | 174.4 (11) |
| N9 | 0.872 (8) | 1.870 (8) | 2.7364 (17) | 172.5 (12) |
| C2 | 0.9300 | 2.3900 | 3.0553 (19) | 128.00 |
| C5 | 0.9300 | 2.4600 | 3.357 (2) | 161.00 |
| C6 | 0.9300 | 2.5300 | 3.447 (2) | 170.00 |
| C8 | 0.9300 | 2.4200 | 3.245 (2) | 148.00 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .