Literature DB >> 21577587

2,2,6,6-Tetra-kis(biphenyl-2-yl)-4,4,8,8-tetra-methyl-cyclo-tetra-siloxane.

Erik P A Couzijn, Martin Lutz, Anthony L Spek, Koop Lammertsma.   

Abstract

The title compound, [-Si(C(12)H(9))(2)OSi(CH(3))(2)O-](2), was obtained unintentionally as the product of an attempted crystallization of caesium bis-(biphenyl-2,2'-di-yl)fluoro-silicate from dimethyl-formamide. In the crystal, the mol-ecule is located on an inversion center and the siloxane ring adopts a twist-chair conformation with the two dimethyl-substituted Si atoms lying 0.7081 (5) Å out of the plane defined by the two bis-(biphenyl-2-yl)-substituted Si atoms and the four O atoms. In each Si(C(12)H(9))(2) unit, the orientation of one terminal phenyl ring relative to the phenyl-ene ring of the other biphenyl moiety suggests a parallel displaced π-π stacking inter-action [centroid distance = 4.2377 (11) Å and dihedral angle = 15.40 (9)°].

Entities:  

Year:  2009        PMID: 21577587      PMCID: PMC2969922          DOI: 10.1107/S1600536809031961

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to stable compounds of penta­valent, anionic silicon bearing five organic substituents, see: Couzijn et al. (2004 ▶, 2006 ▶, 2009 ▶); Deerenberg et al. (2002 ▶); de Keijzer et al. (1997 ▶). For related structures, see: Malinovskii et al. (2007 ▶); Steinfink et al. (1955 ▶); Hensen et al. (1997 ▶). For puckering analysis,, see: Evans & Boeyens (1989 ▶). Bis(biphenyl-2,2′-di­yl)silane was synthesized using a slight modification of a literature procedure (Gilman & Gorsich, 1958 ▶).

Experimental

Crystal data

C52H48O4Si4 M = 849.26 Orthorhombic, a = 17.3418 (2) Å b = 14.6488 (2) Å c = 17.9584 (2) Å V = 4562.09 (10) Å3 Z = 4 Mo Kα radiation μ = 0.18 mm−1 T = 110 K 0.30 × 0.12 × 0.03 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: none 68467 measured reflections 4317 independent reflections 3247 reflections with I > 2σ(I) R int = 0.081

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.097 S = 1.07 4317 reflections 273 parameters H-atom parameters constrained Δρmax = 0.26 e Å−3 Δρmin = −0.33 e Å−3 Data collection: COLLECT (Nonius, 1999 ▶); cell refinement: HKL-2000 (Otwinowski & Minor, 1997 ▶); data reduction: HKL-2000 and SORTAV (Blessing, 1997 ▶); program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: manual editing of SHELXL output. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809031961/vm2002sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809031961/vm2002Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C52H48O4Si4F(000) = 1792
Mr = 849.26Dx = 1.236 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 88729 reflections
a = 17.3418 (2) Åθ = 1.0–25.7°
b = 14.6488 (2) ŵ = 0.18 mm1
c = 17.9584 (2) ÅT = 110 K
V = 4562.09 (10) Å3Needle, colourless
Z = 40.30 × 0.12 × 0.03 mm
Nonius KappaCCD diffractometer3247 reflections with I > 2σ(I)
Radiation source: rotating anodeRint = 0.081
graphiteθmax = 25.7°, θmin = 2.1°
φ and ω scansh = −21→21
68467 measured reflectionsk = −17→17
4317 independent reflectionsl = −21→21
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: difference Fourier map
wR(F2) = 0.097H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0428P)2 + 1.7858P] where P = (Fo2 + 2Fc2)/3
4317 reflections(Δ/σ)max = 0.001
273 parametersΔρmax = 0.26 e Å3
0 restraintsΔρmin = −0.33 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Si10.42728 (3)0.37257 (3)0.49618 (3)0.02364 (14)
Si20.41400 (3)0.57131 (3)0.44096 (3)0.02422 (14)
O10.42038 (7)0.45998 (8)0.44053 (6)0.0257 (3)
O20.49862 (7)0.38739 (8)0.55394 (6)0.0272 (3)
C10.35711 (12)0.60943 (14)0.52232 (11)0.0382 (5)
H1A0.30640.57980.52150.057*
H1B0.35050.67580.52030.057*
H1C0.38430.59280.56820.057*
C20.37276 (12)0.60687 (14)0.35079 (11)0.0367 (5)
H2A0.40620.58580.31030.055*
H2B0.36890.67360.34920.055*
H2C0.32130.58010.34500.055*
C110.45192 (10)0.27253 (12)0.43560 (9)0.0243 (4)
C210.46918 (11)0.28754 (13)0.36038 (10)0.0298 (4)
H210.46460.34750.34080.036*
C310.49264 (11)0.21768 (13)0.31368 (10)0.0332 (5)
H310.50340.22980.26280.040*
C410.50025 (12)0.13027 (13)0.34161 (11)0.0329 (5)
H410.51650.08200.31000.039*
C510.48408 (11)0.11334 (13)0.41570 (10)0.0305 (4)
H510.49010.05330.43470.037*
C610.45917 (10)0.18265 (12)0.46293 (10)0.0240 (4)
C710.43948 (10)0.15854 (11)0.54194 (10)0.0252 (4)
C810.36294 (11)0.14336 (12)0.56199 (10)0.0307 (4)
H810.32330.15260.52630.037*
C910.34381 (12)0.11508 (13)0.63306 (11)0.0347 (5)
H910.29140.10450.64570.042*
C1010.40081 (13)0.10219 (13)0.68579 (11)0.0358 (5)
H1010.38770.08270.73460.043*
C1110.47717 (12)0.11785 (13)0.66701 (10)0.0342 (5)
H1110.51650.10960.70320.041*
C1210.49649 (11)0.14550 (12)0.59550 (10)0.0300 (4)
H1210.54900.15560.58300.036*
C120.33957 (11)0.36475 (12)0.55627 (10)0.0264 (4)
C220.35201 (12)0.35934 (12)0.63354 (10)0.0319 (5)
H220.40340.35540.65170.038*
C320.29145 (13)0.35950 (13)0.68412 (11)0.0386 (5)
H320.30150.35610.73600.046*
C420.21658 (13)0.36468 (15)0.65844 (12)0.0433 (5)
H420.17490.36410.69270.052*
C520.20213 (12)0.37074 (14)0.58287 (11)0.0388 (5)
H520.15040.37450.56580.047*
C620.26242 (11)0.37139 (12)0.53110 (10)0.0298 (4)
C720.24184 (11)0.38291 (13)0.45090 (11)0.0299 (4)
C820.26624 (11)0.32206 (13)0.39587 (10)0.0328 (5)
H820.29660.27070.40940.039*
C920.24684 (12)0.33543 (15)0.32168 (11)0.0392 (5)
H920.26430.29360.28500.047*
C1020.20206 (12)0.40966 (15)0.30091 (11)0.0399 (5)
H1020.18910.41900.25010.048*
C1120.17661 (12)0.46966 (15)0.35464 (11)0.0392 (5)
H1120.14570.52050.34090.047*
C1220.19584 (11)0.45615 (14)0.42866 (11)0.0346 (5)
H1220.17730.49770.46510.042*
U11U22U33U12U13U23
Si10.0279 (3)0.0196 (3)0.0235 (3)−0.0010 (2)0.0023 (2)−0.0001 (2)
Si20.0271 (3)0.0214 (3)0.0241 (3)0.0024 (2)0.0005 (2)0.0006 (2)
O10.0306 (7)0.0207 (6)0.0258 (6)−0.0004 (5)0.0028 (5)0.0004 (5)
O20.0308 (7)0.0240 (6)0.0266 (7)−0.0015 (5)0.0002 (5)0.0014 (5)
C10.0389 (12)0.0349 (11)0.0409 (12)0.0038 (9)0.0085 (9)−0.0055 (9)
C20.0380 (12)0.0349 (11)0.0370 (11)−0.0011 (9)−0.0074 (9)0.0067 (9)
C110.0237 (9)0.0242 (9)0.0251 (9)−0.0016 (8)−0.0005 (7)−0.0011 (7)
C210.0359 (11)0.0253 (10)0.0282 (10)0.0007 (8)0.0037 (8)0.0018 (8)
C310.0392 (12)0.0334 (11)0.0270 (10)0.0006 (9)0.0067 (8)−0.0029 (8)
C410.0392 (12)0.0278 (10)0.0317 (10)0.0028 (9)0.0079 (9)−0.0063 (8)
C510.0336 (11)0.0220 (9)0.0359 (11)0.0030 (8)0.0039 (9)−0.0004 (8)
C610.0214 (9)0.0242 (9)0.0263 (9)−0.0010 (7)0.0000 (7)0.0001 (7)
C710.0314 (10)0.0155 (8)0.0286 (10)0.0006 (7)0.0010 (8)−0.0017 (7)
C810.0306 (11)0.0295 (10)0.0321 (10)−0.0019 (8)−0.0002 (8)−0.0003 (8)
C910.0358 (12)0.0348 (11)0.0335 (11)−0.0058 (9)0.0071 (9)0.0017 (9)
C1010.0553 (14)0.0257 (10)0.0264 (10)0.0006 (9)0.0074 (9)0.0003 (8)
C1110.0422 (12)0.0309 (11)0.0295 (11)0.0062 (9)−0.0052 (9)−0.0010 (8)
C1210.0299 (10)0.0267 (10)0.0335 (11)0.0039 (8)0.0000 (8)−0.0023 (8)
C120.0332 (10)0.0194 (9)0.0267 (9)−0.0025 (8)0.0051 (8)−0.0018 (7)
C220.0390 (12)0.0257 (10)0.0309 (10)−0.0029 (9)0.0045 (9)0.0001 (8)
C320.0524 (14)0.0356 (12)0.0278 (10)−0.0059 (10)0.0092 (10)−0.0010 (9)
C420.0449 (14)0.0489 (13)0.0361 (12)−0.0058 (11)0.0183 (10)−0.0042 (10)
C520.0325 (12)0.0449 (13)0.0390 (12)−0.0043 (9)0.0087 (9)−0.0041 (10)
C620.0349 (11)0.0239 (10)0.0304 (10)−0.0051 (8)0.0064 (8)−0.0041 (8)
C720.0239 (10)0.0297 (10)0.0360 (10)−0.0065 (8)0.0053 (8)−0.0033 (8)
C820.0298 (11)0.0332 (11)0.0354 (11)−0.0032 (9)0.0027 (8)−0.0048 (9)
C920.0349 (12)0.0465 (13)0.0361 (11)−0.0050 (10)0.0043 (9)−0.0096 (10)
C1020.0331 (12)0.0549 (14)0.0318 (11)−0.0042 (10)0.0011 (9)0.0018 (10)
C1120.0297 (11)0.0446 (13)0.0432 (12)0.0014 (9)0.0020 (9)0.0052 (10)
C1220.0282 (11)0.0372 (11)0.0386 (11)−0.0029 (9)0.0065 (9)−0.0047 (9)
Si1—O11.6287 (12)C91—C1011.382 (3)
Si1—O21.6290 (13)C91—H910.9500
Si1—C121.8684 (19)C101—C1111.386 (3)
Si1—C111.8746 (17)C101—H1010.9500
Si2—O2i1.6342 (13)C111—C1211.387 (3)
Si2—O11.6347 (12)C111—H1110.9500
Si2—C21.8452 (19)C121—H1210.9500
Si2—C11.8494 (19)C12—C221.407 (3)
O2—Si2i1.6342 (13)C12—C621.415 (3)
C1—H1A0.9800C22—C321.388 (3)
C1—H1B0.9800C22—H220.9500
C1—H1C0.9800C32—C421.380 (3)
C2—H2A0.9800C32—H320.9500
C2—H2B0.9800C42—C521.383 (3)
C2—H2C0.9800C42—H420.9500
C11—C211.401 (2)C52—C621.399 (3)
C11—C611.411 (2)C52—H520.9500
C21—C311.384 (3)C62—C721.493 (3)
C21—H210.9500C72—C1221.395 (3)
C31—C411.381 (3)C72—C821.396 (3)
C31—H310.9500C82—C921.388 (3)
C41—C511.382 (3)C82—H820.9500
C41—H410.9500C92—C1021.387 (3)
C51—C611.392 (2)C92—H920.9500
C51—H510.9500C102—C1121.378 (3)
C61—C711.501 (2)C102—H1020.9500
C71—C1211.393 (3)C112—C1221.385 (3)
C71—C811.393 (3)C112—H1120.9500
C81—C911.382 (3)C122—H1220.9500
C81—H810.9500
O1—Si1—O2109.98 (7)C71—C81—H81119.5
O1—Si1—C12110.05 (7)C101—C91—C81120.13 (19)
O2—Si1—C12105.00 (8)C101—C91—H91119.9
O1—Si1—C11105.97 (7)C81—C91—H91119.9
O2—Si1—C11107.49 (7)C91—C101—C111119.62 (18)
C12—Si1—C11118.22 (8)C91—C101—H101120.2
O2i—Si2—O1107.88 (7)C111—C101—H101120.2
O2i—Si2—C2107.71 (8)C101—C111—C121120.29 (18)
O1—Si2—C2107.68 (8)C101—C111—H111119.9
O2i—Si2—C1109.78 (8)C121—C111—H111119.9
O1—Si2—C1109.94 (8)C111—C121—C71120.53 (18)
C2—Si2—C1113.66 (10)C111—C121—H121119.7
Si1—O1—Si2141.85 (8)C71—C121—H121119.7
Si1—O2—Si2i142.12 (8)C22—C12—C62117.63 (17)
Si2—C1—H1A109.5C22—C12—Si1116.64 (14)
Si2—C1—H1B109.5C62—C12—Si1125.51 (14)
H1A—C1—H1B109.5C32—C22—C12121.96 (19)
Si2—C1—H1C109.5C32—C22—H22119.0
H1A—C1—H1C109.5C12—C22—H22119.0
H1B—C1—H1C109.5C42—C32—C22119.55 (19)
Si2—C2—H2A109.5C42—C32—H32120.2
Si2—C2—H2B109.5C22—C32—H32120.2
H2A—C2—H2B109.5C32—C42—C52120.13 (19)
Si2—C2—H2C109.5C32—C42—H42119.9
H2A—C2—H2C109.5C52—C42—H42119.9
H2B—C2—H2C109.5C42—C52—C62121.1 (2)
C21—C11—C61117.57 (16)C42—C52—H52119.4
C21—C11—Si1119.05 (13)C62—C52—H52119.4
C61—C11—Si1123.23 (13)C52—C62—C12119.58 (18)
C31—C21—C11122.07 (17)C52—C62—C72117.58 (18)
C31—C21—H21119.0C12—C62—C72122.79 (16)
C11—C21—H21119.0C122—C72—C82117.48 (18)
C41—C31—C21119.56 (17)C122—C72—C62119.97 (17)
C41—C31—H31120.2C82—C72—C62122.54 (17)
C21—C31—H31120.2C92—C82—C72121.05 (19)
C31—C41—C51119.77 (17)C92—C82—H82119.5
C31—C41—H41120.1C72—C82—H82119.5
C51—C41—H41120.1C102—C92—C82120.29 (19)
C41—C51—C61121.25 (17)C102—C92—H92119.9
C41—C51—H51119.4C82—C92—H92119.9
C61—C51—H51119.4C112—C102—C92119.40 (19)
C51—C61—C11119.77 (16)C112—C102—H102120.3
C51—C61—C71118.35 (16)C92—C102—H102120.3
C11—C61—C71121.87 (15)C102—C112—C122120.3 (2)
C121—C71—C81118.42 (17)C102—C112—H112119.9
C121—C71—C61121.58 (16)C122—C112—H112119.9
C81—C71—C61119.90 (16)C112—C122—C72121.49 (19)
C91—C81—C71121.01 (18)C112—C122—H122119.3
C91—C81—H81119.5C72—C122—H122119.3
O1—Si2—O2i—Si1i−74.36 (14)C81—C91—C101—C1110.1 (3)
O2—Si1—O1—Si2−52.51 (15)C91—C101—C111—C121−0.6 (3)
C12—Si1—O1—Si262.69 (15)C101—C111—C121—C710.5 (3)
C11—Si1—O1—Si2−168.40 (12)C81—C71—C121—C1110.1 (3)
O2i—Si2—O1—Si184.84 (14)C61—C71—C121—C111−176.07 (16)
C2—Si2—O1—Si1−159.17 (13)O1—Si1—C12—C22−127.17 (14)
C1—Si2—O1—Si1−34.85 (16)O2—Si1—C12—C22−8.85 (15)
O1—Si1—O2—Si2i−37.42 (15)C11—Si1—C12—C22110.94 (14)
C12—Si1—O2—Si2i−155.78 (13)O1—Si1—C12—C6247.32 (17)
C11—Si1—O2—Si2i77.52 (14)O2—Si1—C12—C62165.63 (15)
O1—Si1—C11—C217.60 (16)C11—Si1—C12—C62−74.57 (17)
O2—Si1—C11—C21−109.97 (15)C62—C12—C22—C320.6 (3)
C12—Si1—C11—C21131.54 (15)Si1—C12—C22—C32175.55 (14)
O1—Si1—C11—C61−176.83 (14)C12—C22—C32—C420.3 (3)
O2—Si1—C11—C6165.60 (16)C22—C32—C42—C52−0.8 (3)
C12—Si1—C11—C61−52.89 (18)C32—C42—C52—C620.3 (3)
C61—C11—C21—C31−0.1 (3)C42—C52—C62—C120.7 (3)
Si1—C11—C21—C31175.77 (15)C42—C52—C62—C72−176.95 (19)
C11—C21—C31—C41−0.7 (3)C22—C12—C62—C52−1.1 (3)
C21—C31—C41—C510.3 (3)Si1—C12—C62—C52−175.54 (14)
C31—C41—C51—C610.8 (3)C22—C12—C62—C72176.41 (17)
C41—C51—C61—C11−1.6 (3)Si1—C12—C62—C722.0 (3)
C41—C51—C61—C71177.46 (18)C52—C62—C72—C12252.9 (2)
C21—C11—C61—C511.1 (3)C12—C62—C72—C122−124.6 (2)
Si1—C11—C61—C51−174.49 (14)C52—C62—C72—C82−126.4 (2)
C21—C11—C61—C71−177.85 (16)C12—C62—C72—C8256.1 (3)
Si1—C11—C61—C716.5 (2)C122—C72—C82—C921.5 (3)
C51—C61—C71—C12178.6 (2)C62—C72—C82—C92−179.20 (18)
C11—C61—C71—C121−102.4 (2)C72—C82—C92—C102−0.5 (3)
C51—C61—C71—C81−97.5 (2)C82—C92—C102—C112−0.4 (3)
C11—C61—C71—C8181.5 (2)C92—C102—C112—C1220.3 (3)
C121—C71—C81—C91−0.7 (3)C102—C112—C122—C720.8 (3)
C61—C71—C81—C91175.58 (17)C82—C72—C122—C112−1.7 (3)
C71—C81—C91—C1010.6 (3)C62—C72—C122—C112179.02 (17)
Si1—O11.6287 (12)
Si1—O21.6290 (13)
Si1—C121.8684 (19)
Si1—C111.8746 (17)
Si2—O2i1.6342 (13)
Si2—O11.6347 (12)
Si2—C21.8452 (19)
Si2—C11.8494 (19)
O1—Si1—O2109.98 (7)
O2i—Si2—O1107.88 (7)
Si1—O1—Si2141.85 (8)
Si1—O2—Si2i142.12 (8)
O1—Si2—O2i—Si1i−74.36 (14)
O2—Si1—O1—Si2−52.51 (15)
O2i—Si2—O1—Si184.84 (14)
O1—Si1—O2—Si2i−37.42 (15)
C11—C61—C71—C8181.5 (2)
C12—C62—C72—C8256.1 (3)

Symmetry code: (i) .

  6 in total

1.  Dynamic configurational isomerism of a stable pentaorganosilicate.

Authors:  Erik P A Couzijn; Marius Schakel; Frans J J De Kanter; Andreas W Ehlers; Martin Lutz; Anthony L Spek; Koop Lammertsma
Journal:  Angew Chem Int Ed Engl       Date:  2004-06-28       Impact factor: 15.336

2.  Electronic structure and stability of pentaorganosilicates.

Authors:  Erik P A Couzijn; Andreas W Ehlers; Marius Schakel; Koop Lammertsma
Journal:  J Am Chem Soc       Date:  2006-10-18       Impact factor: 15.419

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Configurationally rigid pentaorganosilicates.

Authors:  Erik P A Couzijn; Daniël W F van den Engel; J Chris Slootweg; Frans J J de Kanter; Andreas W Ehlers; Marius Schakel; Koop Lammertsma
Journal:  J Am Chem Soc       Date:  2009-03-18       Impact factor: 15.419

5.  Tetraalkylammonium pentaorganosilicates: the first highly stable silicates with five hydrocarbon ligands.

Authors:  Sirik Deerenberg; Marius Schakel; Adrianus H J F de Keijzer; Mirko Kranenburg; Martin Lutz; Anthony L Spek; Koop Lammertsma
Journal:  Chem Commun (Camb)       Date:  2002-02-21       Impact factor: 6.222

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total

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