| Literature DB >> 21577578 |
B Thimme Gowda, Sabine Foro, P A Suchetan, Hartmut Fuess.
Abstract
The crystal structure of the title compound, C(8)H(5)Br(3)ClNO, shows both intra-molecular N-H⋯Br and inter-molecular N-H⋯O hydrogen bonding. In the crystal, the mol-ecules are packed into column-like chains in the c-axis direction via the N-H⋯O hydrogen bonds.Entities:
Year: 2009 PMID: 21577578 PMCID: PMC2969889 DOI: 10.1107/S1600536809032139
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H5Br3ClNO | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 2849 reflections |
| θ = 2.6–27.8° | |
| µ = 10.35 mm−1 | |
| Long needle, colourless | |
| 0.40 × 0.16 × 0.10 mm |
| Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector | 2353 independent reflections |
| Radiation source: fine-focus sealed tube | 1643 reflections with |
| graphite | |
| Rotation method data acquisition using ω and φ scans | θmax = 26.4°, θmin = 2.7° |
| Absorption correction: multi-scan ( | |
| 5692 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2353 reflections | (Δ/σ)max = 0.005 |
| 130 parameters | Δρmax = 2.04 e Å−3 |
| 1 restraint | Δρmin = −0.95 e Å−3 |
| Experimental. CrysAlis RED (Oxford Diffraction, 2009) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.4391 (10) | 0.4634 (8) | 0.1037 (4) | 0.038 (2) | |
| C2 | 0.4633 (11) | 0.3604 (9) | 0.0673 (5) | 0.048 (2) | |
| H2 | 0.3990 | 0.2939 | 0.0633 | 0.058* | |
| C3 | 0.5841 (10) | 0.3580 (10) | 0.0369 (5) | 0.051 (3) | |
| H3 | 0.6017 | 0.2885 | 0.0129 | 0.062* | |
| C4 | 0.6786 (10) | 0.4569 (10) | 0.0418 (4) | 0.051 (3) | |
| C5 | 0.6549 (10) | 0.5578 (10) | 0.0790 (5) | 0.053 (3) | |
| H5 | 0.7196 | 0.6240 | 0.0829 | 0.064* | |
| C6 | 0.5357 (11) | 0.5609 (9) | 0.1103 (4) | 0.048 (2) | |
| H6 | 0.5206 | 0.6282 | 0.1357 | 0.058* | |
| C7 | 0.2449 (10) | 0.5644 (8) | 0.1518 (4) | 0.039 (2) | |
| C8 | 0.1178 (10) | 0.5312 (8) | 0.1876 (4) | 0.043 (2) | |
| N1 | 0.3172 (8) | 0.4601 (6) | 0.1361 (3) | 0.0425 (19) | |
| H1N | 0.283 (10) | 0.386 (6) | 0.140 (4) | 0.051* | |
| O1 | 0.2715 (7) | 0.6760 (5) | 0.1408 (3) | 0.0521 (18) | |
| Cl1 | 0.8276 (3) | 0.4561 (4) | 0.00254 (14) | 0.0775 (10) | |
| Br1 | −0.00883 (11) | 0.42751 (13) | 0.14426 (6) | 0.0737 (5) | |
| Br2 | 0.02425 (15) | 0.68618 (11) | 0.21207 (7) | 0.0817 (5) | |
| Br3 | 0.17735 (16) | 0.43813 (13) | 0.25385 (5) | 0.0792 (5) |
| C1 | 0.053 (5) | 0.028 (4) | 0.033 (5) | 0.007 (4) | 0.005 (4) | 0.006 (4) |
| C2 | 0.054 (6) | 0.036 (5) | 0.054 (6) | 0.003 (4) | 0.005 (5) | −0.001 (5) |
| C3 | 0.047 (6) | 0.053 (6) | 0.054 (6) | 0.017 (5) | 0.009 (5) | −0.006 (5) |
| C4 | 0.040 (5) | 0.073 (7) | 0.040 (5) | 0.011 (5) | 0.004 (4) | 0.004 (5) |
| C5 | 0.040 (5) | 0.050 (6) | 0.070 (7) | −0.004 (4) | 0.008 (5) | −0.006 (5) |
| C6 | 0.055 (6) | 0.042 (5) | 0.046 (6) | 0.001 (5) | 0.000 (5) | −0.014 (5) |
| C7 | 0.042 (4) | 0.035 (5) | 0.040 (5) | −0.001 (4) | 0.009 (4) | 0.007 (4) |
| C8 | 0.053 (5) | 0.023 (4) | 0.052 (6) | 0.002 (4) | 0.011 (5) | −0.005 (4) |
| N1 | 0.051 (5) | 0.025 (4) | 0.052 (5) | 0.002 (3) | 0.013 (4) | 0.007 (3) |
| O1 | 0.056 (4) | 0.024 (3) | 0.077 (5) | 0.003 (3) | 0.022 (4) | 0.003 (3) |
| Cl1 | 0.0468 (15) | 0.117 (3) | 0.069 (2) | 0.0073 (16) | 0.0172 (14) | −0.0168 (19) |
| Br1 | 0.0450 (6) | 0.0856 (9) | 0.0904 (10) | −0.0022 (6) | −0.0020 (6) | −0.0336 (8) |
| Br2 | 0.0900 (9) | 0.0439 (6) | 0.1112 (12) | 0.0043 (6) | 0.0532 (8) | −0.0141 (7) |
| Br3 | 0.0860 (9) | 0.0990 (10) | 0.0527 (7) | −0.0108 (7) | 0.0088 (7) | 0.0255 (7) |
| C1—C6 | 1.380 (13) | C5—H5 | 0.9300 |
| C1—C2 | 1.389 (13) | C6—H6 | 0.9300 |
| C1—N1 | 1.416 (12) | C7—O1 | 1.202 (10) |
| C2—C3 | 1.382 (14) | C7—N1 | 1.334 (11) |
| C2—H2 | 0.9300 | C7—C8 | 1.542 (13) |
| C3—C4 | 1.374 (14) | C8—Br2 | 1.921 (8) |
| C3—H3 | 0.9300 | C8—Br1 | 1.929 (10) |
| C4—C5 | 1.383 (14) | C8—Br3 | 1.937 (10) |
| C4—Cl1 | 1.727 (10) | N1—H1N | 0.84 (5) |
| C5—C6 | 1.382 (14) | ||
| C6—C1—C2 | 120.4 (9) | C1—C6—C5 | 119.5 (9) |
| C6—C1—N1 | 121.7 (8) | C1—C6—H6 | 120.2 |
| C2—C1—N1 | 117.8 (8) | C5—C6—H6 | 120.2 |
| C3—C2—C1 | 119.2 (9) | O1—C7—N1 | 126.0 (8) |
| C3—C2—H2 | 120.4 | O1—C7—C8 | 120.2 (8) |
| C1—C2—H2 | 120.4 | N1—C7—C8 | 113.8 (7) |
| C4—C3—C2 | 120.8 (9) | C7—C8—Br2 | 111.5 (6) |
| C4—C3—H3 | 119.6 | C7—C8—Br1 | 109.6 (6) |
| C2—C3—H3 | 119.6 | Br2—C8—Br1 | 108.4 (5) |
| C3—C4—C5 | 119.6 (9) | C7—C8—Br3 | 108.8 (7) |
| C3—C4—Cl1 | 120.8 (8) | Br2—C8—Br3 | 107.4 (5) |
| C5—C4—Cl1 | 119.5 (8) | Br1—C8—Br3 | 111.0 (4) |
| C6—C5—C4 | 120.4 (9) | C7—N1—C1 | 125.2 (7) |
| C6—C5—H5 | 119.8 | C7—N1—H1N | 119 (7) |
| C4—C5—H5 | 119.8 | C1—N1—H1N | 115 (7) |
| C6—C1—C2—C3 | −1.2 (15) | O1—C7—C8—Br2 | −2.7 (12) |
| N1—C1—C2—C3 | −177.3 (9) | N1—C7—C8—Br2 | 176.9 (7) |
| C1—C2—C3—C4 | −1.1 (15) | O1—C7—C8—Br1 | 117.4 (9) |
| C2—C3—C4—C5 | 2.3 (16) | N1—C7—C8—Br1 | −63.0 (10) |
| C2—C3—C4—Cl1 | −178.3 (8) | O1—C7—C8—Br3 | −121.0 (9) |
| C3—C4—C5—C6 | −1.3 (16) | N1—C7—C8—Br3 | 58.6 (9) |
| Cl1—C4—C5—C6 | 179.3 (8) | O1—C7—N1—C1 | 0.5 (16) |
| C2—C1—C6—C5 | 2.2 (15) | C8—C7—N1—C1 | −179.1 (9) |
| N1—C1—C6—C5 | 178.1 (9) | C6—C1—N1—C7 | 36.9 (14) |
| C4—C5—C6—C1 | −1.0 (16) | C2—C1—N1—C7 | −147.1 (10) |
| H··· | ||||
| N1—H1N···Br1 | 0.84 (5) | 2.87 (10) | 3.197 (8) | 105 (8) |
| N1—H1N···O1i | 0.84 (5) | 2.21 (5) | 3.038 (9) | 168 (10) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.84 (5) | 2.87 (10) | 3.197 (8) | 105 (8) |
| N1—H1 | 0.84 (5) | 2.21 (5) | 3.038 (9) | 168 (10) |
Symmetry code: (i) .