Literature DB >> 21577576

2-Meth-oxy-6-[(Z)-[(5-methyl-2-pyrid-yl)imino-meth-yl]phenol.

Xin-Yu Liu1, Yu-Hua Fan, Cai-Feng Bi, Qiang Wang, Yuan Gao.   

Abstract

The title compound, C(14)H(14)N(2)O(2), was obtained by a condensation reaction between o-vanillin and 5-methyl-pyridin-2-amine. In the mol-ecule, the dihedral angle between the pyridine and benzene rings is 9.08 (13)°. An intra-molecular hydrogen bond involving the imine N atom and the hydroxyl group may influence the conformation of the mol-ecule. The crystal structure is stabilized by weak C-H⋯O hydrogen bonds.

Entities:  

Year:  2009        PMID: 21577576      PMCID: PMC2970039          DOI: 10.1107/S1600536809031699

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to the use of Schiff bases as ligands in coordination chemistry, see: Yamada, (1999 ▶). For their biological activity, see: Yang et al. (2000 ▶). For a related structure, see: Dal et al. (2007 ▶).

Experimental

Crystal data

C14H14N2O2 M = 242.27 Monoclinic, a = 11.5995 (6) Å b = 4.9546 (2) Å c = 23.9983 (12) Å β = 117.6090 (4)° V = 1222.15 (10) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 296 K 0.42 × 0.10 × 0.10 mm

Data collection

Siemens SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.963, T max = 0.991 13275 measured reflections 2806 independent reflections 1822 reflections with I > 2σ(I) R int = 0.049

Refinement

R[F 2 > 2σ(F 2)] = 0.061 wR(F 2) = 0.198 S = 1.03 2806 reflections 166 parameters H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.22 e Å−3 Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809031699/lh2873sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809031699/lh2873Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H14N2O2F(000) = 512
Mr = 242.27Dx = 1.317 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2267 reflections
a = 11.5995 (6) Åθ = 3.3–24.6°
b = 4.9546 (2) ŵ = 0.09 mm1
c = 23.9983 (12) ÅT = 296 K
β = 117.6090°Neddle, red
V = 1222.15 (10) Å30.42 × 0.10 × 0.10 mm
Z = 4
Siemens SMART CCD area-detector diffractometer2806 independent reflections
Radiation source: fine-focus sealed tube1822 reflections with I > 2σ(I)
graphiteRint = 0.049
φ and ω scansθmax = 27.5°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −14→15
Tmin = 0.963, Tmax = 0.991k = −6→6
13275 measured reflectionsl = −31→30
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.061Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.198H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.1232P)2 + 0.0489P] where P = (Fo2 + 2Fc2)/3
2806 reflections(Δ/σ)max < 0.001
166 parametersΔρmax = 0.25 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C11.3545 (2)1.1391 (4)0.42144 (10)0.0552 (6)
H1A1.43611.05290.43170.083*
H1B1.36461.25600.45530.083*
H1C1.32751.24310.38370.083*
C21.25384 (18)0.9287 (4)0.41151 (9)0.0435 (5)
C31.2184 (2)0.8629 (4)0.45776 (9)0.0518 (5)
H31.25770.94870.49660.062*
C41.1247 (2)0.6699 (4)0.44540 (10)0.0521 (5)
H41.10000.62410.47590.063*
C51.06743 (18)0.5443 (4)0.38751 (9)0.0418 (5)
C61.18963 (19)0.7932 (4)0.35514 (9)0.0470 (5)
H61.21180.83710.32360.056*
C70.92176 (17)0.2020 (4)0.32757 (8)0.0411 (5)
H70.95090.22210.29760.049*
C80.82147 (17)0.0051 (4)0.31741 (8)0.0388 (4)
C90.77601 (18)−0.0253 (4)0.36199 (9)0.0420 (5)
C100.67807 (19)−0.2169 (4)0.35134 (9)0.0454 (5)
C110.62864 (19)−0.3719 (4)0.29787 (9)0.0473 (5)
H110.5642−0.49860.29100.057*
C120.6744 (2)−0.3404 (4)0.25398 (9)0.0477 (5)
H120.6396−0.44530.21770.057*
C130.76972 (19)−0.1575 (4)0.26345 (9)0.0444 (5)
H130.8004−0.14070.23400.053*
C140.5556 (2)−0.4409 (5)0.39416 (11)0.0647 (7)
H14A0.4731−0.41660.35760.097*
H14B0.5437−0.43960.43120.097*
H14C0.5926−0.61050.39130.097*
N11.09794 (16)0.6034 (3)0.34181 (7)0.0468 (4)
N20.97078 (15)0.3485 (3)0.37709 (7)0.0439 (4)
O10.82133 (16)0.1211 (3)0.41479 (7)0.0617 (5)
H10.87220.23520.41450.093*
O20.64070 (16)−0.2284 (3)0.39775 (7)0.0662 (5)
U11U22U33U12U13U23
C10.0492 (12)0.0508 (13)0.0651 (13)−0.0111 (10)0.0261 (10)0.0039 (10)
C20.0383 (10)0.0425 (11)0.0525 (11)−0.0024 (8)0.0235 (8)0.0047 (8)
C30.0529 (12)0.0577 (13)0.0463 (11)−0.0142 (10)0.0241 (9)−0.0060 (9)
C40.0572 (13)0.0622 (13)0.0474 (11)−0.0159 (10)0.0330 (10)−0.0029 (9)
C50.0396 (10)0.0420 (11)0.0496 (10)−0.0038 (8)0.0255 (9)0.0022 (8)
C60.0483 (11)0.0510 (12)0.0521 (11)−0.0084 (9)0.0320 (9)0.0024 (9)
C70.0359 (9)0.0466 (11)0.0447 (10)0.0008 (8)0.0220 (8)0.0051 (8)
C80.0368 (10)0.0375 (10)0.0445 (10)0.0010 (7)0.0209 (8)0.0034 (7)
C90.0426 (10)0.0428 (11)0.0457 (10)−0.0078 (8)0.0248 (8)−0.0038 (8)
C100.0443 (10)0.0465 (11)0.0553 (11)−0.0076 (8)0.0314 (9)−0.0038 (8)
C110.0422 (10)0.0428 (11)0.0562 (11)−0.0065 (8)0.0222 (9)−0.0024 (8)
C120.0497 (11)0.0462 (11)0.0452 (10)−0.0023 (9)0.0203 (9)−0.0047 (8)
C130.0465 (11)0.0476 (12)0.0445 (10)−0.0003 (8)0.0255 (9)0.0004 (8)
C140.0669 (15)0.0673 (15)0.0784 (16)−0.0255 (12)0.0493 (13)−0.0062 (12)
N10.0469 (9)0.0522 (10)0.0478 (9)−0.0090 (8)0.0274 (8)−0.0010 (7)
N20.0397 (9)0.0464 (10)0.0512 (9)−0.0083 (7)0.0257 (7)0.0000 (7)
O10.0707 (10)0.0734 (11)0.0594 (9)−0.0352 (8)0.0457 (8)−0.0245 (8)
O20.0782 (11)0.0697 (11)0.0738 (10)−0.0374 (9)0.0548 (9)−0.0209 (8)
C1—C21.500 (3)C8—C131.402 (3)
C1—H1A0.9600C8—C91.403 (2)
C1—H1B0.9600C9—O11.338 (2)
C1—H1C0.9600C9—C101.410 (3)
C2—C61.379 (3)C10—O21.371 (2)
C2—C31.389 (3)C10—C111.372 (3)
C3—C41.373 (3)C11—C121.391 (3)
C3—H30.9300C11—H110.9300
C4—C51.380 (3)C12—C131.365 (3)
C4—H40.9300C12—H120.9300
C5—N11.332 (2)C13—H130.9300
C5—N21.414 (2)C14—O21.418 (2)
C6—N11.342 (2)C14—H14A0.9600
C6—H60.9300C14—H14B0.9600
C7—N21.279 (2)C14—H14C0.9600
C7—C81.450 (3)O1—H10.8200
C7—H70.9300
C2—C1—H1A109.5C9—C8—C7120.01 (16)
C2—C1—H1B109.5O1—C9—C8122.83 (17)
H1A—C1—H1B109.5O1—C9—C10117.82 (16)
C2—C1—H1C109.5C8—C9—C10119.36 (17)
H1A—C1—H1C109.5O2—C10—C11125.75 (17)
H1B—C1—H1C109.5O2—C10—C9114.34 (17)
C6—C2—C3116.38 (17)C11—C10—C9119.91 (18)
C6—C2—C1121.39 (17)C10—C11—C12120.31 (18)
C3—C2—C1122.22 (18)C10—C11—H11119.8
C4—C3—C2119.25 (18)C12—C11—H11119.8
C4—C3—H3120.4C13—C12—C11120.83 (18)
C2—C3—H3120.4C13—C12—H12119.6
C3—C4—C5119.68 (18)C11—C12—H12119.6
C3—C4—H4120.2C12—C13—C8120.16 (17)
C5—C4—H4120.2C12—C13—H13119.9
N1—C5—C4122.84 (17)C8—C13—H13119.9
N1—C5—N2119.77 (17)O2—C14—H14A109.5
C4—C5—N2117.37 (17)O2—C14—H14B109.5
N1—C6—C2125.65 (17)H14A—C14—H14B109.5
N1—C6—H6117.2O2—C14—H14C109.5
C2—C6—H6117.2H14A—C14—H14C109.5
N2—C7—C8120.97 (17)H14B—C14—H14C109.5
N2—C7—H7119.5C5—N1—C6116.19 (16)
C8—C7—H7119.5C7—N2—C5121.88 (16)
C13—C8—C9119.41 (17)C9—O1—H1109.5
C13—C8—C7120.57 (17)C10—O2—C14117.02 (16)
D—H···AD—HH···AD···AD—H···A
O1—H1···N20.821.842.5587 (19)146
C3—H3···O2i0.932.643.567 (3)175
C4—H4···O1i0.932.663.282 (2)125
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N20.821.842.5587 (19)146
C3—H3⋯O2i0.932.643.567 (3)175
C4—H4⋯O1i0.932.663.282 (2)125

Symmetry code: (i) .

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