| Literature DB >> 21577567 |
Narendar Reddy Gade, Y Manjula, Javed Iqbal, Peddy Vishweshwar.
Abstract
The analysis of the title chiral auxiliary compound, C(13)H(15)NOS(2), has enabled the determination of the absolute configuration at the benzyl-bearing ring C atom as S. In the crystal structure, mol-ecules aggregate into helical chains along the b axis via C-H⋯O contacts.Entities:
Year: 2009 PMID: 21577567 PMCID: PMC2970139 DOI: 10.1107/S1600536809030104
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H15NOS2 | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 3674 reflections |
| θ = 2.3–27.4° | |
| µ = 0.38 mm−1 | |
| β = 95.537 (6)° | Prism, yellow |
| 0.50 × 0.40 × 0.20 mm | |
| Rigaku Mercury diffractometer | 2361 reflections with |
| Detector resolution: 7.31 pixels mm-1 | |
| ω scans | θmax = 27.4° |
| Absorption correction: multi-scan (Jacobson, 1998) | |
| 7301 measured reflections | |
| 2734 independent reflections |
| Refinement on | Chebychev polynomial |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.32 e Å−3 | |
| Δρmin = −0.35 e Å−3 | |
| 2734 reflections | Absolute structure: Flack (1983), 1138 Friedel pairs |
| 170 parameters | Flack parameter: −0.05 (6) |
| H-atom parameters constrained |
| Geometry. Bond distances, angles |
| Refinement. Refinement was performed using all reflections. The weighted |
| S1 | 0.55104 (6) | 1.08609 (10) | 0.94969 (5) | 0.0574 (2) | |
| S2 | 0.80540 (7) | 1.31770 (10) | 1.04864 (6) | 0.0630 (2) | |
| O1 | 0.96079 (17) | 1.0605 (2) | 0.69074 (15) | 0.0720 (6) | |
| N1 | 0.79082 (15) | 1.1039 (2) | 0.83154 (13) | 0.0410 (4) | |
| C1 | 0.6994 (2) | 0.9543 (2) | 0.76431 (19) | 0.0436 (6) | |
| C2 | 0.5366 (2) | 0.9806 (2) | 0.79429 (19) | 0.0498 (7) | |
| C3 | 0.7324 (2) | 1.1748 (2) | 0.93706 (19) | 0.0462 (6) | |
| C4 | 0.7616 (2) | 0.7610 (2) | 0.80159 (19) | 0.0469 (6) | |
| C5 | 0.7183 (2) | 0.6180 (2) | 0.70140 (17) | 0.0441 (6) | |
| C6 | 0.5872 (2) | 0.5119 (2) | 0.7014 (2) | 0.0561 (7) | |
| C7 | 0.5469 (3) | 0.3871 (3) | 0.6051 (2) | 0.0673 (9) | |
| C8 | 0.6379 (3) | 0.3610 (3) | 0.5087 (2) | 0.0704 (9) | |
| C9 | 0.7667 (3) | 0.4651 (3) | 0.5063 (2) | 0.0719 (9) | |
| C10 | 0.8074 (2) | 0.5935 (3) | 0.60097 (19) | 0.0569 (7) | |
| C11 | 0.9289 (2) | 1.1496 (2) | 0.7801 (2) | 0.0501 (7) | |
| C12 | 1.0320 (2) | 1.3001 (3) | 0.8384 (2) | 0.0545 (7) | |
| C13 | 1.1629 (2) | 1.3369 (4) | 0.7610 (2) | 0.0861 (10) | |
| H1 | 0.70330 | 0.96970 | 0.67560 | 0.0520* | |
| H6 | 0.52430 | 0.52600 | 0.76860 | 0.0670* | |
| H7 | 0.45570 | 0.31750 | 0.60530 | 0.0790* | |
| H8 | 0.61000 | 0.27260 | 0.44400 | 0.0830* | |
| H9 | 0.83030 | 0.44600 | 0.44020 | 0.0870* | |
| H10 | 0.89540 | 0.66810 | 0.59680 | 0.0690* | |
| H21 | 0.48380 | 1.06070 | 0.73390 | 0.0600* | |
| H22 | 0.48550 | 0.86440 | 0.79480 | 0.0590* | |
| H41 | 0.72130 | 0.72350 | 0.87750 | 0.0550* | |
| H42 | 0.86910 | 0.76750 | 0.81570 | 0.0560* | |
| H121 | 1.07080 | 1.26210 | 0.92110 | 0.0650* | |
| H122 | 0.97480 | 1.41110 | 0.84380 | 0.0650* | |
| H131 | 1.19300 | 1.46340 | 0.77050 | 0.1050* | |
| H132 | 1.24580 | 1.25860 | 0.78930 | 0.1050* | |
| H133 | 1.13230 | 1.31200 | 0.67430 | 0.1050* |
| S1 | 0.0512 (2) | 0.0621 (3) | 0.0611 (3) | −0.0066 (3) | 0.0167 (2) | −0.0116 (3) |
| S2 | 0.0587 (3) | 0.0640 (4) | 0.0664 (3) | −0.0025 (3) | 0.0059 (2) | −0.0247 (3) |
| O1 | 0.0664 (9) | 0.0751 (11) | 0.0796 (10) | −0.0150 (9) | 0.0330 (8) | −0.0265 (10) |
| N1 | 0.0401 (7) | 0.0364 (8) | 0.0470 (8) | −0.0001 (7) | 0.0062 (6) | −0.0019 (7) |
| C1 | 0.0419 (10) | 0.0430 (11) | 0.0458 (10) | −0.0008 (8) | 0.0035 (8) | 0.0002 (8) |
| C2 | 0.0417 (10) | 0.0508 (13) | 0.0561 (12) | −0.0027 (9) | 0.0011 (8) | −0.0019 (9) |
| C3 | 0.0427 (10) | 0.0438 (11) | 0.0513 (11) | 0.0037 (8) | 0.0008 (8) | −0.0042 (9) |
| C4 | 0.0510 (11) | 0.0393 (11) | 0.0487 (11) | 0.0028 (8) | −0.0031 (8) | −0.0011 (8) |
| C5 | 0.0453 (10) | 0.0389 (12) | 0.0467 (10) | 0.0008 (8) | −0.0027 (8) | 0.0025 (8) |
| C6 | 0.0647 (13) | 0.0460 (13) | 0.0569 (12) | −0.0083 (10) | 0.0017 (10) | 0.0087 (9) |
| C7 | 0.0828 (17) | 0.0465 (14) | 0.0678 (15) | −0.0207 (11) | −0.0179 (13) | 0.0093 (11) |
| C8 | 0.104 (2) | 0.0511 (15) | 0.0517 (13) | −0.0052 (13) | −0.0146 (13) | −0.0034 (11) |
| C9 | 0.0992 (19) | 0.0603 (15) | 0.0580 (14) | 0.0079 (15) | 0.0176 (13) | −0.0055 (12) |
| C10 | 0.0579 (11) | 0.0527 (12) | 0.0617 (12) | 0.0015 (12) | 0.0134 (9) | −0.0026 (12) |
| C11 | 0.0415 (11) | 0.0480 (13) | 0.0617 (12) | 0.0026 (8) | 0.0095 (9) | −0.0011 (9) |
| C12 | 0.0430 (10) | 0.0488 (12) | 0.0711 (13) | −0.0016 (10) | 0.0032 (9) | −0.0073 (11) |
| C13 | 0.0543 (13) | 0.086 (2) | 0.121 (2) | −0.0223 (15) | 0.0242 (13) | −0.0216 (19) |
| S1—C2 | 1.806 (2) | C12—C13 | 1.506 (3) |
| S1—C3 | 1.744 (2) | C1—H1 | 0.9500 |
| S2—C3 | 1.650 (2) | C2—H21 | 0.9500 |
| O1—C11 | 1.199 (3) | C2—H22 | 0.9500 |
| N1—C1 | 1.486 (2) | C4—H41 | 0.9500 |
| N1—C3 | 1.374 (3) | C4—H42 | 0.9500 |
| N1—C11 | 1.424 (2) | C6—H6 | 0.9500 |
| C1—C2 | 1.517 (3) | C7—H7 | 0.9500 |
| C1—C4 | 1.532 (2) | C8—H8 | 0.9500 |
| C4—C5 | 1.501 (3) | C9—H9 | 0.9500 |
| C5—C6 | 1.389 (3) | C10—H10 | 0.9500 |
| C5—C10 | 1.395 (3) | C12—H121 | 0.9500 |
| C6—C7 | 1.380 (3) | C12—H122 | 0.9500 |
| C7—C8 | 1.373 (3) | C13—H131 | 0.9500 |
| C8—C9 | 1.366 (4) | C13—H132 | 0.9500 |
| C9—C10 | 1.385 (3) | C13—H133 | 0.9500 |
| C11—C12 | 1.509 (3) | ||
| C2—S1—C3 | 93.92 (9) | C1—C2—H21 | 110.00 |
| C1—N1—C3 | 115.36 (14) | C1—C2—H22 | 111.00 |
| C1—N1—C11 | 115.55 (14) | H21—C2—H22 | 109.00 |
| C3—N1—C11 | 129.05 (14) | C1—C4—H41 | 109.00 |
| N1—C1—C2 | 107.08 (13) | C1—C4—H42 | 109.00 |
| N1—C1—C4 | 111.56 (15) | C5—C4—H41 | 108.00 |
| C2—C1—C4 | 112.58 (14) | C5—C4—H42 | 109.00 |
| S1—C2—C1 | 104.96 (13) | H41—C4—H42 | 109.00 |
| S1—C3—S2 | 118.18 (11) | C5—C6—H6 | 119.00 |
| S1—C3—N1 | 110.37 (12) | C7—C6—H6 | 120.00 |
| S2—C3—N1 | 131.43 (14) | C6—C7—H7 | 120.00 |
| C1—C4—C5 | 112.21 (15) | C8—C7—H7 | 119.00 |
| C4—C5—C6 | 122.19 (16) | C7—C8—H8 | 120.00 |
| C4—C5—C10 | 120.09 (16) | C9—C8—H8 | 121.00 |
| C6—C5—C10 | 117.67 (16) | C8—C9—H9 | 119.00 |
| C5—C6—C7 | 120.91 (19) | C10—C9—H9 | 120.00 |
| C6—C7—C8 | 120.7 (2) | C5—C10—H10 | 119.00 |
| C7—C8—C9 | 119.3 (2) | C9—C10—H10 | 120.00 |
| C8—C9—C10 | 120.7 (2) | C11—C12—H121 | 109.00 |
| C5—C10—C9 | 120.65 (18) | C11—C12—H122 | 109.00 |
| O1—C11—N1 | 117.07 (15) | C13—C12—H121 | 109.00 |
| O1—C11—C12 | 121.82 (17) | C13—C12—H122 | 109.00 |
| N1—C11—C12 | 121.09 (16) | H121—C12—H122 | 109.00 |
| C11—C12—C13 | 111.70 (18) | C12—C13—H131 | 109.00 |
| N1—C1—H1 | 109.00 | C12—C13—H132 | 110.00 |
| C2—C1—H1 | 109.00 | C12—C13—H133 | 109.00 |
| C4—C1—H1 | 108.00 | H131—C13—H132 | 109.00 |
| S1—C2—H21 | 110.00 | H131—C13—H133 | 110.00 |
| S1—C2—H22 | 111.00 | H132—C13—H133 | 109.00 |
| C3—S1—C2—C1 | 22.91 (12) | C4—C1—C2—S1 | 93.51 (15) |
| C2—S1—C3—S2 | 171.92 (11) | N1—C1—C4—C5 | −155.93 (15) |
| C2—S1—C3—N1 | −9.64 (13) | C2—C1—C4—C5 | 83.7 (2) |
| C3—N1—C1—C2 | 25.15 (19) | C1—C4—C5—C6 | −91.3 (2) |
| C3—N1—C1—C4 | −98.44 (17) | C1—C4—C5—C10 | 86.0 (2) |
| C11—N1—C1—C2 | −156.77 (15) | C4—C5—C6—C7 | 177.20 (17) |
| C11—N1—C1—C4 | 79.65 (19) | C10—C5—C6—C7 | −0.1 (3) |
| C1—N1—C3—S1 | −7.69 (18) | C4—C5—C10—C9 | −178.46 (18) |
| C1—N1—C3—S2 | 170.47 (14) | C6—C5—C10—C9 | −1.1 (3) |
| C11—N1—C3—S1 | 174.53 (14) | C5—C6—C7—C8 | 1.9 (3) |
| C11—N1—C3—S2 | −7.3 (3) | C6—C7—C8—C9 | −2.4 (3) |
| C1—N1—C11—O1 | −2.2 (2) | C7—C8—C9—C10 | 1.2 (3) |
| C1—N1—C11—C12 | 179.47 (16) | C8—C9—C10—C5 | 0.6 (3) |
| C3—N1—C11—O1 | 175.56 (17) | O1—C11—C12—C13 | 7.3 (3) |
| C3—N1—C11—C12 | −2.8 (3) | N1—C11—C12—C13 | −174.42 (17) |
| N1—C1—C2—S1 | −29.44 (15) |
| H··· | ||||
| C9—H9···O1i | 0.95 | 2.55 | 3.408 (4) | 150 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C9—H9⋯O1i | 0.95 | 2.55 | 3.408 (4) | 150 |
Symmetry code: (i) .