Literature DB >> 21577482

Bis[2-(3,4-disulfanylphen-yl)acetato]bis-(2-methyl-1H-imidazole-κN)zinc(II).

Qiang Wang1, Li-Jun Wang, Jian Hou.   

Abstract

In the title mononuclear zinc(II) complex, [Zn(C(8)H(7)O(2)S(2))(2)(C(4)H(6)N(2))(2)], the Zn(II) atom, lying on a twofold axis, is coordinated by two O atoms from two 2-(3,4-disulfanylphen-yl)acetate anions and by two N atoms from 2-methyl-imidazole ligands in a distorted tetra-hdral coordination. The crystal structure is stabilized by inter-molecular C-H⋯O and N-H⋯O hydrogen bonds and π-π inter-actions with a centroid-centroid distance of 3.6136 (16) Å.

Entities:  

Year:  2009        PMID: 21577482      PMCID: PMC2970003          DOI: 10.1107/S1600536809033893

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to organometallic complexes and their applications, see: Sommerfeldt et al. (2008 ▶); Huang et al. (2007 ▶); Neville et al. (2008 ▶). Zinc derivatives are of particular inter­est owing to their unique photosensitizing properties for photodynamic therapy, see: You et al. (2006 ▶); Shi et al. (2008 ▶); Xiao et al. (2008 ▶, 2009 ▶). For related structures, see: Yang et al. (2004 ▶); You et al. (2003 ▶, 2004 ▶); Qiu et al. (2004 ▶, 2007 ▶); Halcrow et al. (2000 ▶).

Experimental

Crystal data

[Zn(C8H7O2S2)2(C4n class="Species">H6N2)2] M = 628.16 Monoclinic, a = 12.9599 (9) Å b = 9.3909 (6) Å c = 21.5549 (12) Å β = 91.579 (2)° V = 2622.4 (3) Å3 Z = 4 Mo Kα radiation μ = 1.30 mm−1 T = 298 K 0.30 × 0.20 × 0.20 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.697, T max = 0.782 15712 measured reflections 3260 independent reflections 3102 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.125 S = 1.12 3260 reflections 175 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.70 e Å−3 Δρmin = −0.60 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAIn class="Chemical">NT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809033893/rk2159sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809033893/rk2159Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Zn(C8H7O2S2)2(C4H6N2)2]F(000) = 1296
Mr = 628.16Dx = 1.591 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 3063 reflections
a = 12.9599 (9) Åθ = 2.3–26.7°
b = 9.3909 (6) ŵ = 1.30 mm1
c = 21.5549 (12) ÅT = 298 K
β = 91.579 (2)°Block, colourless
V = 2622.4 (3) Å30.30 × 0.20 × 0.20 mm
Z = 4
Bruker APEXII area-detector diffractometer3260 independent reflections
Radiation source: fine-focus sealed tube3102 reflections with I > 2σ(I)
graphiteRint = 0.020
φ and ω scansθmax = 28.3°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −17→17
Tmin = 0.697, Tmax = 0.782k = −12→12
15712 measured reflectionsl = −28→28
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.125H atoms treated by a mixture of independent and constrained refinement
S = 1.12w = 1/[σ2(Fo2) + (0.0644P)2 + 4.9284P] where P = (Fo2 + 2Fc2)/3
3260 reflections(Δ/σ)max = 0.001
175 parametersΔρmax = 0.70 e Å3
0 restraintsΔρmin = −0.60 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.2396 (2)0.5043 (3)0.48533 (12)0.0379 (5)
N1−0.07005 (15)−0.0094 (2)0.29964 (10)0.0336 (4)
O1−0.05381 (13)0.28914 (19)0.30382 (8)0.0365 (4)
S10.28934 (7)0.42402 (10)0.55206 (4)0.0571 (2)
H3A0.28720.29700.54590.086*
Zn10.00000.13605 (4)0.25000.03067 (13)
C20.2944 (2)0.6098 (3)0.45584 (13)0.0364 (5)
H2−0.251 (3)−0.178 (4)0.3375 (18)0.058 (10)*
N2−0.18947 (19)−0.1506 (2)0.33454 (12)0.0412 (5)
O20.10600 (13)0.25971 (19)0.33887 (9)0.0366 (4)
S20.41436 (6)0.66341 (9)0.48428 (4)0.0489 (2)
H3B0.43100.78290.46760.073*
C30.2536 (2)0.6715 (3)0.40205 (13)0.0403 (6)
H30.28960.74310.38210.048*
C40.1594 (2)0.6260 (3)0.37831 (13)0.0415 (6)
H40.13170.66890.34270.050*
C50.10476 (19)0.5171 (3)0.40649 (12)0.0361 (5)
C60.1456 (2)0.4587 (3)0.46066 (12)0.0393 (5)
H60.10930.38770.48080.047*
C70.0069 (2)0.4586 (3)0.37719 (14)0.0422 (6)
H7A−0.02510.53200.35150.051*
H7B−0.04060.43560.40970.051*
C80.02273 (18)0.3261 (3)0.33751 (11)0.0312 (4)
C9−0.0334 (2)−0.0732 (3)0.35314 (13)0.0417 (6)
H90.0316−0.05870.37140.050*
C10−0.1071 (2)−0.1607 (3)0.37499 (15)0.0449 (6)
H10−0.1024−0.21660.41060.054*
C11−0.16510 (19)−0.0582 (3)0.28945 (12)0.0370 (5)
C12−0.2349 (2)−0.0175 (4)0.23679 (16)0.0590 (9)
H12A−0.25730.07910.24200.088*
H12B−0.2938−0.07950.23550.088*
H12C−0.1987−0.02570.19870.088*
U11U22U33U12U13U23
C10.0419 (13)0.0362 (12)0.0355 (12)−0.0028 (10)−0.0015 (10)−0.0026 (10)
N10.0279 (9)0.0342 (10)0.0390 (10)−0.0042 (8)0.0047 (8)−0.0016 (8)
O10.0281 (8)0.0389 (9)0.0421 (9)0.0006 (7)−0.0039 (7)−0.0082 (7)
S10.0623 (5)0.0593 (5)0.0487 (4)−0.0145 (4)−0.0168 (4)0.0159 (4)
Zn10.0238 (2)0.0328 (2)0.0354 (2)0.0000.00027 (14)0.000
C20.0337 (12)0.0335 (11)0.0419 (13)−0.0027 (9)0.0013 (10)−0.0070 (10)
N20.0345 (11)0.0364 (11)0.0533 (13)−0.0079 (9)0.0095 (10)0.0012 (9)
O20.0286 (8)0.0360 (9)0.0449 (9)0.0012 (7)−0.0033 (7)−0.0036 (7)
S20.0354 (4)0.0513 (4)0.0595 (4)−0.0100 (3)−0.0046 (3)−0.0066 (3)
C30.0433 (14)0.0345 (12)0.0433 (14)−0.0051 (10)0.0040 (11)0.0005 (10)
C40.0476 (15)0.0379 (13)0.0387 (13)0.0003 (11)−0.0022 (11)−0.0006 (10)
C50.0334 (11)0.0335 (12)0.0413 (12)−0.0001 (9)0.0012 (10)−0.0105 (10)
C60.0409 (13)0.0356 (12)0.0416 (13)−0.0060 (10)0.0032 (10)−0.0028 (10)
C70.0337 (12)0.0407 (13)0.0519 (15)0.0020 (10)−0.0028 (11)−0.0135 (12)
C80.0306 (11)0.0303 (10)0.0327 (11)−0.0026 (9)0.0011 (9)−0.0005 (9)
C90.0318 (12)0.0472 (15)0.0461 (14)0.0008 (10)0.0006 (10)0.0051 (12)
C100.0420 (14)0.0423 (14)0.0507 (15)0.0018 (11)0.0056 (12)0.0103 (12)
C110.0317 (11)0.0370 (12)0.0424 (13)−0.0046 (9)0.0055 (10)−0.0045 (10)
C120.0418 (16)0.081 (2)0.0540 (18)−0.0166 (16)−0.0088 (13)0.0081 (17)
C1—C61.384 (4)C3—C41.379 (4)
C1—C21.384 (4)C3—H30.9300
C1—S11.732 (3)C4—C51.392 (4)
N1—C111.327 (3)C4—H40.9300
N1—C91.373 (3)C5—C61.382 (4)
N1—Zn11.972 (2)C5—C71.506 (3)
O1—C81.262 (3)C6—H60.9300
O1—Zn11.9858 (18)C7—C81.527 (3)
S1—H3A1.2000C7—H7A0.9700
Zn1—N1i1.972 (2)C7—H7B0.9700
Zn1—O1i1.9858 (18)C9—C101.354 (4)
C2—C31.388 (4)C9—H90.9300
C2—S21.730 (3)C10—H100.9300
N2—C111.347 (4)C11—C121.482 (4)
N2—C101.363 (4)C12—H12A0.9600
N2—H20.85 (4)C12—H12B0.9600
O2—C81.246 (3)C12—H12C0.9600
S2—H3B1.2000
C6—C1—C2120.2 (2)C4—C5—C7121.2 (3)
C6—C1—S1119.2 (2)C5—C6—C1121.0 (2)
C2—C1—S1120.6 (2)C5—C6—H6119.5
C11—N1—C9106.7 (2)C1—C6—H6119.5
C11—N1—Zn1126.04 (18)C5—C7—C8114.0 (2)
C9—N1—Zn1127.18 (17)C5—C7—H7A108.7
C8—O1—Zn1104.61 (15)C8—C7—H7A108.7
C1—S1—H3A109.5C5—C7—H7B108.7
N1—Zn1—N1i92.29 (12)C8—C7—H7B108.7
N1—Zn1—O190.59 (8)H7A—C7—H7B107.6
N1i—Zn1—O1173.13 (8)O2—C8—O1122.9 (2)
N1—Zn1—O1i173.13 (8)O2—C8—C7121.6 (2)
N1i—Zn1—O1i90.59 (8)O1—C8—C7115.5 (2)
O1—Zn1—O1i87.23 (11)C10—C9—N1109.0 (2)
C1—C2—C3119.6 (2)C10—C9—H9125.5
C1—C2—S2120.9 (2)N1—C9—H9125.5
C3—C2—S2119.5 (2)C9—C10—N2106.4 (3)
C11—N2—C10108.1 (2)C9—C10—H10126.8
C11—N2—H2120 (3)N2—C10—H10126.8
C10—N2—H2131 (3)N1—C11—N2109.8 (2)
C2—S2—H3B109.5N1—C11—C12125.6 (3)
C4—C3—C2119.6 (2)N2—C11—C12124.6 (2)
C4—C3—H3120.2C11—C12—H12A109.5
C2—C3—H3120.2C11—C12—H12B109.5
C3—C4—C5121.4 (3)H12A—C12—H12B109.5
C3—C4—H4119.3C11—C12—H12C109.5
C5—C4—H4119.3H12A—C12—H12C109.5
C6—C5—C4118.2 (2)H12B—C12—H12C109.5
C6—C5—C7120.5 (2)
C11—N1—Zn1—N1i−96.2 (2)C6—C5—C7—C8−81.8 (3)
C9—N1—Zn1—N1i88.2 (2)C4—C5—C7—C894.8 (3)
C8—O1—Zn1—O1i−82.04 (15)Zn1—O1—C8—O2−8.8 (3)
C6—C1—C2—C31.2 (4)Zn1—O1—C8—C7171.33 (18)
S1—C1—C2—C3179.3 (2)C5—C7—C8—O212.1 (4)
C6—C1—C2—S2−177.5 (2)C5—C7—C8—O1−168.1 (2)
S1—C1—C2—S20.6 (3)C11—N1—C9—C100.1 (3)
C1—C2—C3—C4−0.6 (4)Zn1—N1—C9—C10176.3 (2)
S2—C2—C3—C4178.1 (2)N1—C9—C10—N20.1 (3)
C2—C3—C4—C5−1.2 (4)C11—N2—C10—C9−0.2 (3)
C3—C4—C5—C62.4 (4)C9—N1—C11—N2−0.2 (3)
C3—C4—C5—C7−174.3 (2)Zn1—N1—C11—N2−176.49 (17)
C4—C5—C6—C1−1.8 (4)C9—N1—C11—C12179.6 (3)
C7—C5—C6—C1174.9 (2)Zn1—N1—C11—C123.3 (4)
C2—C1—C6—C50.0 (4)C10—N2—C11—N10.2 (3)
S1—C1—C6—C5−178.1 (2)C10—N2—C11—C12−179.6 (3)
D—H···AD—HH···AD···AD—H···A
C12—H12B···O1ii0.962.463.381 (4)161
N2—H2···O2iii0.85 (4)1.94 (4)2.785 (3)176 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C12—H12B⋯O1i0.962.463.381 (4)161
N2—H2⋯O2ii0.85 (4)1.94 (4)2.785 (3)176 (4)

Symmetry codes: (i) ; (ii) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Bis2,6-bis

Authors: 
Journal:  Acta Crystallogr C       Date:  2000-12       Impact factor: 1.172

3.  Distinct reaction pathways of peralkylated LnIIAlIII heterobimetallic complexes with substituted phenols.

Authors:  Hanne-Marthe Sommerfeldt; Christian Meermann; Karl W Törnroos; Reiner Anwander
Journal:  Inorg Chem       Date:  2008-04-29       Impact factor: 5.165

4.  Enamines as novel antibacterials and their structure-activity relationships.

Authors:  Zhu-Ping Xiao; Rui-Qin Fang; Huan-Qiu Li; Jia-Yu Xue; Yi Zheng; Hai-Liang Zhu
Journal:  Eur J Med Chem       Date:  2007-12-08       Impact factor: 6.514

5.  Single-crystal to single-crystal structural transformation and photomagnetic properties of a porous iron(II) spin-crossover framework.

Authors:  Suzanne M Neville; Gregory J Halder; Karena W Chapman; Martin B Duriska; Peter D Southon; John D Cashion; Jean-François Létard; Boujemaa Moubaraki; Keith S Murray; Cameron J Kepert
Journal:  J Am Chem Soc       Date:  2008-02-07       Impact factor: 15.419

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.