Literature DB >> 21577473

Bis{μ-2-[1-(2-Pyridylmethyl-imino)eth-yl]phenolato}bis-[azido-copper(II)].

Jun Zhang1, Xiao-Dan Chen, Huai-Hong Zhang, Bai-Wang Sun.   

Abstract

The title compound, [Cu(2)(C(14)H(13)N(2)O)(2)(N(3))(2)], was synthesized by the reaction of Cu(NO(3))(2)·3H(2)O with the Schiff base 2-[1-(2-pyridylmethyl-imino)eth-yl]phenol (HL) in methanol-water solution, adding NaN(3) as the bridging ligand. The asymmetric unit contains one half-mol-ecule, the other half being generated by the inversion center. Each Cu(II) atom shows a slightly distorted trigonal-pyramidal geometry formed by two N atoms and one O atom from one Schiff base ligand, by another O atom of a second Schiff base ligand and by an azide N atom. The crystal structure is stabilized by intermolecular C-H⋯N hydrogen bonds.

Entities:  

Year:  2009        PMID: 21577473      PMCID: PMC2970141          DOI: 10.1107/S1600536809030475

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the potential applications in catalysis and enzymatic reactions, magnetism and mol­ecular architecture of transition metal compounds containing Schiff base ligands, see: Li & Zhang (2004 ▶); You & Zhu (2004 ▶). For the synthesis, see: Pointeau et al. (1986 ▶).

Experimental

Crystal data

[Cu2(C14H13N2O)2(N3)2] M = 661.67 Monoclinic, a = 10.1066 (12) Å b = 8.0545 (10) Å c = 16.7027 (18) Å β = 96.251 (1)° V = 1351.6 (3) Å3 Z = 2 Mo Kα radiation μ = 1.62 mm−1 T = 298 K 0.20 × 0.12 × 0.09 mm

Data collection

Rigaku SCXmini diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.737, T max = 0.868 6641 measured reflections 2379 independent reflections 1720 reflections with I > 2σ(I) R int = 0.042

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.062 S = 1.02 2379 reflections 190 parameters H-atom parameters constrained Δρmax = 0.35 e Å−3 Δρmin = −0.33 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809030475/at2842sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809030475/at2842Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu2(C14H13N2O)2(N3)2]F(000) = 676
Mr = 661.67Dx = 1.626 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 13380 reflections
a = 10.1066 (12) Åθ = 3.0–27.6°
b = 8.0545 (10) ŵ = 1.62 mm1
c = 16.7027 (18) ÅT = 298 K
β = 96.251 (1)°Prism, dark green
V = 1351.6 (3) Å30.20 × 0.12 × 0.09 mm
Z = 2
Rigaku SCXmini diffractometer2379 independent reflections
Radiation source: fine-focus sealed tube1720 reflections with I > 2σ(I)
graphiteRint = 0.042
Detector resolution: 8.192 pixels mm-1θmax = 25.0°, θmin = 2.3°
Thin–slice ω scansh = −12→7
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −9→9
Tmin = 0.737, Tmax = 0.868l = −19→19
6641 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.062H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0192P)2] where P = (Fo2 + 2Fc2)/3
2379 reflections(Δ/σ)max < 0.001
190 parametersΔρmax = 0.35 e Å3
0 restraintsΔρmin = −0.33 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.00744 (4)0.69734 (4)0.00638 (2)0.03343 (13)
N1−0.0002 (2)0.6887 (3)0.12413 (13)0.0349 (6)
N2−0.1427 (2)0.8584 (3)0.01237 (14)0.0324 (6)
N30.0263 (3)0.7564 (3)−0.10588 (15)0.0448 (7)
N40.1145 (3)0.7080 (3)−0.14292 (14)0.0391 (7)
N50.1975 (3)0.6669 (4)−0.18111 (16)0.0579 (9)
O10.14375 (17)0.5289 (2)0.01510 (10)0.0333 (5)
C10.0637 (3)0.6042 (5)0.26461 (17)0.0594 (10)
H1A0.10240.69320.29750.089*
H1B0.10290.50080.28340.089*
H1C−0.03050.60090.26780.089*
C20.0898 (3)0.6322 (4)0.17764 (17)0.0374 (8)
C30.2216 (3)0.5861 (4)0.15511 (17)0.0359 (8)
C40.2396 (3)0.5298 (4)0.07618 (17)0.0347 (8)
C50.3666 (3)0.4732 (4)0.06349 (19)0.0417 (8)
H50.37880.42580.01410.050*
C60.4741 (3)0.4850 (4)0.1214 (2)0.0530 (9)
H60.55730.44770.11040.064*
C70.4584 (4)0.5521 (4)0.1957 (2)0.0583 (11)
H70.53140.56610.23400.070*
C80.3338 (4)0.5977 (4)0.21236 (19)0.0482 (9)
H80.32300.63790.26340.058*
C9−0.1311 (3)0.7385 (4)0.14550 (18)0.0443 (9)
H9A−0.12170.79140.19800.053*
H9B−0.18710.64130.14830.053*
C10−0.1947 (3)0.8571 (4)0.08326 (18)0.0366 (8)
C11−0.2990 (3)0.9584 (4)0.0981 (2)0.0496 (10)
H11−0.33320.95480.14750.060*
C12−0.3517 (3)1.0650 (4)0.0388 (2)0.0528 (10)
H12−0.42171.13500.04780.063*
C13−0.3000 (3)1.0671 (4)−0.0340 (2)0.0473 (9)
H13−0.33521.1373−0.07520.057*
C14−0.1951 (3)0.9631 (4)−0.04483 (19)0.0421 (8)
H14−0.15930.9658−0.09380.050*
U11U22U33U12U13U23
Cu10.0379 (2)0.0380 (2)0.0248 (2)0.0016 (2)0.00541 (15)−0.00083 (19)
N10.0380 (16)0.0401 (16)0.0275 (14)−0.0004 (13)0.0078 (11)−0.0019 (13)
N20.0352 (16)0.0305 (15)0.0317 (15)−0.0032 (11)0.0049 (12)−0.0038 (11)
N30.0442 (18)0.061 (2)0.0314 (15)0.0104 (14)0.0125 (13)0.0084 (13)
N40.0471 (19)0.0414 (17)0.0282 (15)−0.0024 (15)0.0017 (13)0.0035 (13)
N50.063 (2)0.066 (2)0.0480 (18)0.0109 (17)0.0234 (16)−0.0012 (16)
O10.0343 (12)0.0404 (14)0.0245 (11)0.0027 (10)0.0009 (9)−0.0022 (9)
C10.075 (3)0.076 (3)0.029 (2)0.009 (2)0.0094 (17)0.0074 (18)
C20.053 (2)0.0332 (19)0.0261 (18)−0.0024 (16)0.0044 (16)−0.0019 (14)
C30.042 (2)0.0366 (19)0.0282 (18)−0.0008 (16)−0.0008 (15)0.0049 (14)
C40.0376 (19)0.032 (2)0.0349 (19)−0.0034 (14)0.0051 (15)0.0039 (14)
C50.039 (2)0.047 (2)0.0389 (19)0.0029 (17)0.0041 (15)0.0007 (16)
C60.039 (2)0.060 (2)0.058 (2)0.0060 (19)−0.0008 (17)0.006 (2)
C70.047 (2)0.069 (3)0.053 (3)−0.0019 (19)−0.0188 (18)0.004 (2)
C80.061 (3)0.049 (2)0.033 (2)−0.0034 (19)−0.0043 (17)0.0018 (16)
C90.049 (2)0.053 (2)0.0342 (19)0.0045 (17)0.0166 (16)0.0016 (16)
C100.038 (2)0.035 (2)0.037 (2)−0.0054 (15)0.0083 (15)−0.0065 (15)
C110.048 (2)0.051 (3)0.051 (2)0.0052 (18)0.0162 (18)−0.0071 (18)
C120.042 (2)0.052 (2)0.065 (3)0.0054 (18)0.0059 (19)−0.016 (2)
C130.044 (2)0.039 (2)0.056 (2)−0.0018 (17)−0.0072 (17)0.0015 (17)
C140.046 (2)0.042 (2)0.038 (2)−0.0022 (16)0.0022 (15)−0.0026 (16)
Cu1—O11.9278 (18)C4—C51.399 (4)
Cu1—N31.964 (2)C5—C61.377 (4)
Cu1—N11.978 (2)C5—H50.9300
Cu1—N22.007 (2)C6—C71.379 (4)
Cu1—O1i2.3799 (19)C6—H60.9300
N1—C21.287 (4)C7—C81.369 (4)
N1—C91.463 (3)C7—H70.9300
N2—C141.340 (4)C8—H80.9300
N2—C101.347 (3)C9—C101.503 (4)
N3—N41.204 (3)C9—H9A0.9700
N4—N51.156 (3)C9—H9B0.9700
O1—C41.328 (3)C10—C111.377 (4)
O1—Cu1i2.3799 (19)C11—C121.373 (4)
C1—C21.521 (4)C11—H110.9300
C1—H1A0.9600C12—C131.375 (4)
C1—H1B0.9600C12—H120.9300
C1—H1C0.9600C13—C141.378 (4)
C2—C31.471 (4)C13—H130.9300
C3—C81.404 (4)C14—H140.9300
C3—C41.424 (4)
O1—Cu1—N395.73 (9)C5—C4—C3117.1 (3)
O1—Cu1—N190.30 (9)C6—C5—C4122.5 (3)
N3—Cu1—N1167.49 (11)C6—C5—H5118.7
O1—Cu1—N2171.51 (8)C4—C5—H5118.7
N3—Cu1—N292.50 (10)C5—C6—C7120.0 (3)
N1—Cu1—N282.03 (10)C5—C6—H6120.0
O1—Cu1—O1i85.08 (7)C7—C6—H6120.0
N3—Cu1—O1i99.74 (9)C8—C7—C6119.1 (3)
N1—Cu1—O1i91.66 (8)C8—C7—H7120.4
N2—Cu1—O1i91.47 (8)C6—C7—H7120.4
C2—N1—C9121.1 (2)C7—C8—C3122.4 (3)
C2—N1—Cu1127.0 (2)C7—C8—H8118.8
C9—N1—Cu1111.55 (18)C3—C8—H8118.8
C14—N2—C10118.1 (3)N1—C9—C10109.6 (2)
C14—N2—Cu1127.9 (2)N1—C9—H9A109.8
C10—N2—Cu1114.1 (2)C10—C9—H9A109.8
N4—N3—Cu1124.5 (2)N1—C9—H9B109.8
N5—N4—N3176.9 (3)C10—C9—H9B109.8
C4—O1—Cu1120.63 (17)H9A—C9—H9B108.2
C4—O1—Cu1i121.52 (17)N2—C10—C11122.2 (3)
Cu1—O1—Cu1i94.91 (7)N2—C10—C9115.8 (3)
C2—C1—H1A109.5C11—C10—C9122.0 (3)
C2—C1—H1B109.5C12—C11—C10119.1 (3)
H1A—C1—H1B109.5C12—C11—H11120.5
C2—C1—H1C109.5C10—C11—H11120.5
H1A—C1—H1C109.5C11—C12—C13119.4 (3)
H1B—C1—H1C109.5C11—C12—H12120.3
N1—C2—C3120.2 (3)C13—C12—H12120.3
N1—C2—C1122.2 (3)C12—C13—C14118.7 (3)
C3—C2—C1117.6 (3)C12—C13—H13120.7
C8—C3—C4118.5 (3)C14—C13—H13120.7
C8—C3—C2119.7 (3)N2—C14—C13122.6 (3)
C4—C3—C2121.9 (3)N2—C14—H14118.7
O1—C4—C5119.1 (3)C13—C14—H14118.7
O1—C4—C3123.8 (3)
O1—Cu1—N1—C220.2 (3)C1—C2—C3—C4149.0 (3)
N3—Cu1—N1—C2−98.8 (6)Cu1—O1—C4—C5−146.9 (2)
N2—Cu1—N1—C2−163.5 (3)Cu1i—O1—C4—C594.4 (3)
O1i—Cu1—N1—C2105.2 (3)Cu1—O1—C4—C332.9 (4)
O1—Cu1—N1—C9−153.2 (2)Cu1i—O1—C4—C3−85.7 (3)
N3—Cu1—N1—C987.8 (5)C8—C3—C4—O1−173.3 (3)
N2—Cu1—N1—C923.2 (2)C2—C3—C4—O16.6 (5)
O1i—Cu1—N1—C9−68.1 (2)C8—C3—C4—C56.5 (4)
N3—Cu1—N2—C14−2.0 (3)C2—C3—C4—C5−173.6 (3)
N1—Cu1—N2—C14166.7 (3)O1—C4—C5—C6173.6 (3)
O1i—Cu1—N2—C14−101.8 (2)C3—C4—C5—C6−6.2 (5)
N3—Cu1—N2—C10177.8 (2)C4—C5—C6—C71.1 (5)
N1—Cu1—N2—C10−13.5 (2)C5—C6—C7—C83.6 (5)
O1i—Cu1—N2—C1078.0 (2)C6—C7—C8—C3−3.1 (5)
O1—Cu1—N3—N4−9.5 (3)C4—C3—C8—C7−2.1 (5)
N1—Cu1—N3—N4109.0 (5)C2—C3—C8—C7178.0 (3)
N2—Cu1—N3—N4172.6 (3)C2—N1—C9—C10158.1 (3)
O1i—Cu1—N3—N4−95.5 (3)Cu1—N1—C9—C10−28.1 (3)
N3—Cu1—O1—C4129.3 (2)C14—N2—C10—C110.3 (4)
N1—Cu1—O1—C4−39.7 (2)Cu1—N2—C10—C11−179.6 (2)
O1i—Cu1—O1—C4−131.4 (2)C14—N2—C10—C9−179.4 (3)
N3—Cu1—O1—Cu1i−99.33 (9)Cu1—N2—C10—C90.8 (3)
N1—Cu1—O1—Cu1i91.64 (8)N1—C9—C10—N217.9 (4)
O1i—Cu1—O1—Cu1i0.0N1—C9—C10—C11−161.8 (3)
C9—N1—C2—C3−178.8 (3)N2—C10—C11—C12−0.2 (5)
Cu1—N1—C2—C38.5 (4)C9—C10—C11—C12179.4 (3)
C9—N1—C2—C13.6 (5)C10—C11—C12—C130.5 (5)
Cu1—N1—C2—C1−169.1 (2)C11—C12—C13—C14−0.9 (5)
N1—C2—C3—C8151.1 (3)C10—N2—C14—C13−0.7 (4)
C1—C2—C3—C8−31.2 (4)Cu1—N2—C14—C13179.1 (2)
N1—C2—C3—C4−28.7 (4)C12—C13—C14—N21.0 (5)
D—H···AD—HH···AD···AD—H···A
C9—H9B···N5i0.972.553.399 (5)147
C14—H14···N30.932.553.052 (4)114
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C9—H9B⋯N5i0.972.553.399 (5)147
C14—H14⋯N30.932.553.052 (4)114

Symmetry code: (i) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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1.  Bis(μ-biphenyl-2,2'-dicarboxyl-ato)bis-[aqua-(4,4'-dimethyl-2,2'-bipyridine-κN,N')copper(II)].

Authors:  Xi-Yan Dong; Xiao-Jie Xu; Lei Yang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-17
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