| Literature DB >> 21577425 |
Xiao-Ping Li, Wei Fang, Ze-Min Mei, Xiang-Jun Jin, Wen-Liang Qi.
Abstract
In the title compound, {[Cd(C(8)H(4)O(4))(C(11)H(6)N(2)O)(H(2)O)(3)]·2H(2)O}(n), the Cd(II) atom is seven-coordinated by two N atoms from the phenanthroline-derived 4,5-diaza-fluorene-9-one ligand, two O atoms from one bidentate benzene-1,3-dicarboxyl-ate ligand and three O atoms from the three water mol-ecules in a distorted penta-gonal-bipyramidal arrangement. Moreover, there are two dissociative water mol-ecules in each unit. Neighbouring units inter-act through π-π inter-actions [centroid-centroid distances = 3.325 (3) and 3.358 (4) Å] and O-H⋯O hydrogen-bonding, resulting in a two-dimensional network extending parallel to (001).Entities:
Year: 2009 PMID: 21577425 PMCID: PMC2969955 DOI: 10.1107/S1600536809031237
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cd(C8H4O4)(C11H6N2O)(H2O)3]·2H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 25 reflections | |
| θ = 7.5–15° | |
| µ = 1.10 mm−1 | |
| α = 96.268 (2)° | |
| β = 92.602 (2)° | Block, yellow |
| γ = 102.019 (2)° | 0.34 × 0.29 × 0.20 mm |
| Bruker APEXII diffractometer | 3804 independent reflections |
| Radiation source: fine-focus sealed tube | 3260 reflections with |
| graphite | |
| Detector resolution: 0 pixels mm-1 | θmax = 25.3°, θmin = 1.4° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 5319 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3804 reflections | (Δ/σ)max < 0.001 |
| 284 parameters | Δρmax = 1.39 e Å−3 |
| 0 restraints | Δρmin = −0.64 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cd1 | 0.41915 (4) | 0.92090 (2) | 0.19901 (2) | 0.03260 (12) | |
| O1 | 0.4624 (5) | 0.7585 (3) | 0.2984 (2) | 0.0506 (8) | |
| O2 | 0.2646 (5) | 0.7034 (3) | 0.1714 (2) | 0.0507 (8) | |
| O3 | 0.0030 (5) | 0.2413 (3) | 0.0709 (2) | 0.0466 (7) | |
| O4 | 0.0050 (4) | 0.1021 (2) | 0.1719 (2) | 0.0448 (7) | |
| O5 | 0.2170 (4) | 0.9328 (3) | 0.06495 (19) | 0.0423 (7) | |
| HO5A | 0.1523 | 0.8617 | 0.0376 | 0.051* | |
| HO5B | 0.1310 | 0.9904 | 0.0785 | 0.051* | |
| O6 | 0.1543 (4) | 0.9578 (3) | 0.28319 (19) | 0.0409 (7) | |
| HO6A | 0.0652 | 0.8878 | 0.2978 | 0.049* | |
| HO6B | 0.0857 | 1.0067 | 0.2439 | 0.049* | |
| O7 | 0.6983 (4) | 0.8944 (3) | 0.1303 (2) | 0.0423 (7) | |
| HO7A | 0.7909 | 0.9616 | 0.1164 | 0.051* | |
| HO7B | 0.7246 | 0.8150 | 0.1185 | 0.051* | |
| O8 | 0.8494 (5) | 1.5000 (3) | 0.3739 (3) | 0.0547 (8) | |
| OW1 | 0.1330 (6) | 0.2440 (4) | 0.6739 (3) | 0.0680 (10)* | |
| HW1A | 0.1594 | 0.3283 | 0.6755 | 0.082* | |
| HW1B | 0.2287 | 0.1998 | 0.6674 | 0.082* | |
| OW2 | 0.8579 (5) | 0.6822 (3) | 0.0952 (2) | 0.0534 (8) | |
| HW2A | 0.9077 | 0.6971 | 0.0335 | 0.064* | |
| HW2B | 0.9856 | 0.6831 | 0.1226 | 0.064* | |
| N1 | 0.6184 (5) | 1.0507 (3) | 0.3377 (2) | 0.0365 (8) | |
| N2 | 0.5214 (5) | 1.1420 (3) | 0.1616 (2) | 0.0328 (7) | |
| C1 | 0.6800 (7) | 1.0281 (4) | 0.4218 (3) | 0.0478 (11) | |
| H1A | 0.6541 | 0.9443 | 0.4352 | 0.057* | |
| C2 | 0.7803 (8) | 1.1222 (5) | 0.4906 (3) | 0.0562 (13) | |
| H2A | 0.8212 | 1.1006 | 0.5478 | 0.067* | |
| C3 | 0.8193 (7) | 1.2488 (5) | 0.4736 (3) | 0.0482 (11) | |
| H3A | 0.8847 | 1.3138 | 0.5188 | 0.058* | |
| C4 | 0.7579 (6) | 1.2732 (4) | 0.3883 (3) | 0.0341 (9) | |
| C5 | 0.7763 (6) | 1.3928 (4) | 0.3402 (3) | 0.0389 (10) | |
| C6 | 0.6842 (6) | 1.3482 (4) | 0.2420 (3) | 0.0354 (9) | |
| C7 | 0.6627 (6) | 1.4071 (4) | 0.1647 (3) | 0.0451 (11) | |
| H7A | 0.7073 | 1.4946 | 0.1656 | 0.054* | |
| C8 | 0.5715 (7) | 1.3310 (5) | 0.0844 (3) | 0.0487 (11) | |
| H8 | 0.5559 | 1.3670 | 0.0296 | 0.058* | |
| C9 | 0.5033 (6) | 1.2005 (4) | 0.0861 (3) | 0.0404 (10) | |
| H9A | 0.4419 | 1.1517 | 0.0316 | 0.049* | |
| C10 | 0.6136 (5) | 1.2180 (3) | 0.2354 (3) | 0.0291 (8) | |
| C11 | 0.6594 (6) | 1.1723 (4) | 0.3241 (3) | 0.0320 (8) | |
| C12 | 0.3421 (6) | 0.6768 (4) | 0.2441 (3) | 0.0362 (9) | |
| C13 | 0.2920 (5) | 0.5422 (4) | 0.2679 (3) | 0.0318 (8) | |
| C14 | 0.3450 (6) | 0.5166 (4) | 0.3568 (3) | 0.0362 (9) | |
| H14A | 0.4113 | 0.5820 | 0.4014 | 0.043* | |
| C15 | 0.2974 (6) | 0.3917 (4) | 0.3781 (3) | 0.0411 (10) | |
| H15A | 0.3312 | 0.3737 | 0.4375 | 0.049* | |
| C16 | 0.2012 (6) | 0.2952 (4) | 0.3122 (3) | 0.0338 (9) | |
| H16A | 0.1704 | 0.2121 | 0.3273 | 0.041* | |
| C17 | 0.1493 (5) | 0.3197 (3) | 0.2233 (3) | 0.0276 (8) | |
| C18 | 0.1937 (5) | 0.4439 (3) | 0.2020 (3) | 0.0309 (8) | |
| H19A | 0.1573 | 0.4615 | 0.1428 | 0.037* | |
| C19 | 0.0452 (5) | 0.2137 (3) | 0.1493 (3) | 0.0311 (8) |
| Cd1 | 0.03412 (18) | 0.02318 (16) | 0.03710 (18) | 0.00121 (11) | −0.00345 (12) | 0.00067 (11) |
| O1 | 0.0498 (19) | 0.0243 (15) | 0.069 (2) | −0.0032 (13) | −0.0120 (16) | −0.0015 (14) |
| O2 | 0.055 (2) | 0.0298 (16) | 0.063 (2) | 0.0004 (14) | −0.0124 (16) | 0.0103 (14) |
| O3 | 0.0568 (19) | 0.0375 (16) | 0.0360 (17) | −0.0061 (14) | −0.0068 (14) | −0.0016 (13) |
| O4 | 0.0468 (18) | 0.0216 (14) | 0.061 (2) | 0.0021 (12) | −0.0168 (15) | 0.0021 (13) |
| O5 | 0.0478 (18) | 0.0318 (15) | 0.0423 (17) | 0.0043 (13) | −0.0111 (13) | −0.0030 (12) |
| O6 | 0.0420 (16) | 0.0411 (16) | 0.0401 (16) | 0.0089 (13) | 0.0007 (13) | 0.0081 (13) |
| O7 | 0.0371 (16) | 0.0300 (15) | 0.0556 (18) | 0.0009 (12) | 0.0049 (14) | −0.0019 (13) |
| O8 | 0.0515 (19) | 0.0296 (17) | 0.076 (2) | 0.0010 (14) | −0.0073 (17) | −0.0039 (15) |
| OW2 | 0.0510 (19) | 0.0481 (19) | 0.061 (2) | 0.0056 (15) | 0.0053 (16) | 0.0144 (16) |
| N1 | 0.0396 (19) | 0.0273 (17) | 0.0382 (19) | −0.0008 (14) | 0.0019 (15) | 0.0008 (14) |
| N2 | 0.0299 (17) | 0.0321 (18) | 0.0330 (18) | 0.0024 (14) | −0.0027 (14) | −0.0014 (14) |
| C1 | 0.067 (3) | 0.038 (2) | 0.039 (2) | 0.009 (2) | 0.002 (2) | 0.011 (2) |
| C2 | 0.069 (3) | 0.060 (3) | 0.036 (3) | 0.009 (3) | −0.006 (2) | 0.010 (2) |
| C3 | 0.049 (3) | 0.051 (3) | 0.038 (2) | 0.002 (2) | −0.005 (2) | −0.007 (2) |
| C4 | 0.027 (2) | 0.034 (2) | 0.036 (2) | 0.0024 (16) | 0.0011 (16) | −0.0111 (17) |
| C5 | 0.028 (2) | 0.029 (2) | 0.055 (3) | 0.0015 (17) | 0.0003 (18) | −0.0055 (19) |
| C6 | 0.027 (2) | 0.0250 (19) | 0.053 (3) | 0.0035 (16) | 0.0016 (18) | 0.0025 (18) |
| C7 | 0.039 (2) | 0.031 (2) | 0.065 (3) | 0.0043 (19) | 0.002 (2) | 0.013 (2) |
| C8 | 0.040 (2) | 0.062 (3) | 0.050 (3) | 0.018 (2) | 0.004 (2) | 0.020 (2) |
| C9 | 0.039 (2) | 0.044 (2) | 0.036 (2) | 0.0053 (19) | 0.0006 (18) | 0.0020 (19) |
| C10 | 0.0218 (18) | 0.0279 (19) | 0.036 (2) | 0.0036 (15) | 0.0032 (15) | −0.0014 (16) |
| C11 | 0.030 (2) | 0.027 (2) | 0.036 (2) | 0.0012 (16) | 0.0006 (16) | −0.0024 (16) |
| C12 | 0.030 (2) | 0.025 (2) | 0.051 (3) | 0.0025 (17) | 0.0037 (19) | 0.0002 (18) |
| C13 | 0.0259 (19) | 0.027 (2) | 0.041 (2) | 0.0049 (16) | 0.0000 (16) | 0.0001 (16) |
| C14 | 0.039 (2) | 0.030 (2) | 0.037 (2) | 0.0061 (17) | −0.0036 (18) | −0.0050 (17) |
| C15 | 0.045 (2) | 0.045 (2) | 0.034 (2) | 0.011 (2) | −0.0019 (18) | 0.0073 (19) |
| C16 | 0.035 (2) | 0.0262 (19) | 0.042 (2) | 0.0084 (17) | 0.0033 (17) | 0.0063 (17) |
| C17 | 0.0238 (18) | 0.0235 (18) | 0.035 (2) | 0.0036 (15) | 0.0008 (15) | 0.0021 (15) |
| C18 | 0.028 (2) | 0.0264 (19) | 0.036 (2) | 0.0041 (16) | 0.0003 (16) | 0.0010 (16) |
| C19 | 0.0247 (19) | 0.024 (2) | 0.043 (2) | 0.0039 (15) | 0.0011 (17) | −0.0023 (17) |
| Cd1—O7 | 2.271 (3) | C1—H1A | 0.9300 |
| Cd1—O6 | 2.326 (3) | C2—C3 | 1.388 (7) |
| Cd1—O2 | 2.354 (3) | C2—H2A | 0.9300 |
| Cd1—O5 | 2.368 (3) | C3—C4 | 1.356 (6) |
| Cd1—O1 | 2.441 (3) | C3—H3A | 0.9300 |
| Cd1—N2 | 2.472 (3) | C4—C11 | 1.388 (5) |
| Cd1—N1 | 2.492 (3) | C4—C5 | 1.517 (6) |
| Cd1—C12 | 2.736 (4) | C5—C6 | 1.514 (6) |
| O1—C12 | 1.254 (5) | C6—C7 | 1.361 (6) |
| O2—C12 | 1.246 (5) | C6—C10 | 1.381 (5) |
| O3—C19 | 1.238 (5) | C7—C8 | 1.388 (7) |
| O4—C19 | 1.262 (5) | C7—H7A | 0.9300 |
| O5—HO5A | 0.8494 | C8—C9 | 1.394 (6) |
| O5—HO5B | 0.9593 | C8—H8 | 0.9300 |
| O6—HO6A | 0.9221 | C9—H9A | 0.9300 |
| O6—HO6B | 0.9864 | C10—C11 | 1.466 (6) |
| O7—HO7A | 0.9108 | C12—C13 | 1.505 (5) |
| O7—HO7B | 0.9138 | C13—C18 | 1.384 (5) |
| O8—C5 | 1.203 (5) | C13—C14 | 1.390 (6) |
| OW1—HW1A | 0.8890 | C14—C15 | 1.393 (6) |
| OW1—HW1B | 0.8979 | C14—H14A | 0.9300 |
| OW2—HW2A | 0.9870 | C15—C16 | 1.369 (6) |
| OW2—HW2B | 0.9517 | C15—H15A | 0.9300 |
| N1—C11 | 1.324 (5) | C16—C17 | 1.385 (5) |
| N1—C1 | 1.333 (5) | C16—H16A | 0.9300 |
| N2—C10 | 1.321 (5) | C17—C18 | 1.385 (5) |
| N2—C9 | 1.332 (5) | C17—C19 | 1.514 (5) |
| C1—C2 | 1.388 (7) | C18—H19A | 0.9300 |
| O7—Cd1—O6 | 174.04 (10) | C4—C3—H3A | 121.5 |
| O7—Cd1—O2 | 94.34 (11) | C2—C3—H3A | 121.5 |
| O6—Cd1—O2 | 89.02 (11) | C3—C4—C11 | 118.9 (4) |
| O7—Cd1—O5 | 99.74 (11) | C3—C4—C5 | 134.3 (4) |
| O6—Cd1—O5 | 85.55 (10) | C11—C4—C5 | 106.8 (4) |
| O2—Cd1—O5 | 82.74 (10) | O8—C5—C6 | 127.8 (4) |
| O7—Cd1—O1 | 88.67 (11) | O8—C5—C4 | 126.7 (4) |
| O6—Cd1—O1 | 89.30 (11) | C6—C5—C4 | 105.5 (3) |
| O2—Cd1—O1 | 54.28 (10) | C7—C6—C10 | 118.1 (4) |
| O5—Cd1—O1 | 136.81 (10) | C7—C6—C5 | 134.3 (4) |
| O7—Cd1—N2 | 83.60 (10) | C10—C6—C5 | 107.6 (3) |
| O6—Cd1—N2 | 95.28 (10) | C6—C7—C8 | 117.1 (4) |
| O2—Cd1—N2 | 156.30 (11) | C6—C7—H7A | 121.4 |
| O5—Cd1—N2 | 74.40 (10) | C8—C7—H7A | 121.4 |
| O1—Cd1—N2 | 148.78 (10) | C7—C8—C9 | 119.9 (4) |
| O7—Cd1—N1 | 90.91 (11) | C7—C8—H8 | 120.1 |
| O6—Cd1—N1 | 83.18 (11) | C9—C8—H8 | 120.1 |
| O2—Cd1—N1 | 131.53 (11) | N2—C9—C8 | 123.6 (4) |
| O5—Cd1—N1 | 143.43 (10) | N2—C9—H9A | 118.2 |
| O1—Cd1—N1 | 77.78 (10) | C8—C9—H9A | 118.2 |
| N2—Cd1—N1 | 72.17 (11) | N2—C10—C6 | 127.1 (4) |
| O7—Cd1—C12 | 92.22 (11) | N2—C10—C11 | 123.2 (3) |
| O6—Cd1—C12 | 88.55 (11) | C6—C10—C11 | 109.7 (3) |
| O2—Cd1—C12 | 27.01 (11) | N1—C11—C4 | 126.0 (4) |
| O5—Cd1—C12 | 109.62 (11) | N1—C11—C10 | 123.7 (3) |
| O1—Cd1—C12 | 27.27 (11) | C4—C11—C10 | 110.3 (3) |
| N2—Cd1—C12 | 174.70 (11) | O2—C12—O1 | 122.2 (4) |
| N1—Cd1—C12 | 104.75 (12) | O2—C12—C13 | 119.4 (4) |
| C12—O1—Cd1 | 89.6 (3) | O1—C12—C13 | 118.4 (4) |
| C12—O2—Cd1 | 93.9 (2) | O2—C12—Cd1 | 59.1 (2) |
| Cd1—O5—HO5A | 115.3 | O1—C12—Cd1 | 63.1 (2) |
| Cd1—O5—HO5B | 111.3 | C13—C12—Cd1 | 177.9 (3) |
| HO5A—O5—HO5B | 110.7 | C18—C13—C14 | 119.9 (4) |
| Cd1—O6—HO6A | 117.7 | C18—C13—C12 | 120.4 (4) |
| Cd1—O6—HO6B | 104.4 | C14—C13—C12 | 119.6 (4) |
| HO6A—O6—HO6B | 109.4 | C13—C14—C15 | 119.1 (4) |
| Cd1—O7—HO7A | 122.1 | C13—C14—H14A | 120.4 |
| Cd1—O7—HO7B | 120.4 | C15—C14—H14A | 120.4 |
| HO7A—O7—HO7B | 117.4 | C16—C15—C14 | 120.5 (4) |
| HW1A—OW1—HW1B | 121.2 | C16—C15—H15A | 119.8 |
| HW2A—OW2—HW2B | 93.1 | C14—C15—H15A | 119.8 |
| C11—N1—C1 | 114.5 (4) | C15—C16—C17 | 120.7 (4) |
| C11—N1—Cd1 | 109.7 (3) | C15—C16—H16A | 119.6 |
| C1—N1—Cd1 | 135.7 (3) | C17—C16—H16A | 119.6 |
| C10—N2—C9 | 114.2 (3) | C16—C17—C18 | 119.1 (3) |
| C10—N2—Cd1 | 110.7 (2) | C16—C17—C19 | 121.4 (3) |
| C9—N2—Cd1 | 135.1 (3) | C18—C17—C19 | 119.5 (3) |
| N1—C1—C2 | 124.0 (4) | C13—C18—C17 | 120.6 (4) |
| N1—C1—H1A | 118.0 | C13—C18—H19A | 119.7 |
| C2—C1—H1A | 118.0 | C17—C18—H19A | 119.7 |
| C1—C2—C3 | 119.7 (4) | O3—C19—O4 | 123.9 (4) |
| C1—C2—H2A | 120.2 | O3—C19—C17 | 118.5 (3) |
| C3—C2—H2A | 120.2 | O4—C19—C17 | 117.5 (3) |
| C4—C3—C2 | 117.0 (4) |
| H··· | ||||
| O5—HO5A···O3i | 0.85 | 1.95 | 2.728 (4) | 151 |
| O5—HO5B···O4ii | 0.96 | 2.06 | 2.933 (4) | 151 |
| O6—HO6A···OW1iii | 0.92 | 1.86 | 2.776 (5) | 175 |
| O6—HO6B···O4ii | 0.99 | 1.70 | 2.675 (4) | 171 |
| O7—HO7A···O4iv | 0.91 | 1.96 | 2.744 (4) | 143 |
| O7—HO7B···OW2 | 0.91 | 1.87 | 2.757 (4) | 162 |
| OW1—HW1A···O8v | 0.89 | 2.07 | 2.903 (5) | 156 |
| OW1—HW1B···O1vi | 0.90 | 2.12 | 2.824 (5) | 135 |
| OW2—HW2A···O3vii | 0.99 | 1.80 | 2.769 (4) | 168 |
| OW2—HW2B···O2viii | 0.95 | 1.99 | 2.936 (5) | 173 |
Selected geometric parameters (Å, °)
| Cd1—O7 | 2.271 (3) |
| Cd1—O6 | 2.326 (3) |
| Cd1—O2 | 2.354 (3) |
| Cd1—O5 | 2.368 (3) |
| Cd1—O1 | 2.441 (3) |
| Cd1—N2 | 2.472 (3) |
| Cd1—N1 | 2.492 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O5—H | 0.85 | 1.95 | 2.728 (4) | 151 |
| O5—H | 0.96 | 2.06 | 2.933 (4) | 151 |
| O6—H | 0.92 | 1.86 | 2.776 (5) | 175 |
| O6—H | 0.99 | 1.70 | 2.675 (4) | 171 |
| O7—H | 0.91 | 1.96 | 2.744 (4) | 143 |
| O7—H | 0.91 | 1.87 | 2.757 (4) | 162 |
| O | 0.89 | 2.07 | 2.903 (5) | 156 |
| O | 0.90 | 2.12 | 2.824 (5) | 135 |
| O | 0.99 | 1.80 | 2.769 (4) | 168 |
| O | 0.95 | 1.99 | 2.936 (5) | 173 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) ; (viii) .