| Literature DB >> 21577420 |
Qian Li, Dong Zhang, Chun-Ling Chen, Lin Yan.
Abstract
The asymmetric unit of title compound, [Cu(NCS)(C(10)H(8)N(2))(2)]ClO(4), contains a bis-(2,2'-bipyridine)(isothio-cyanato)copper(II) cation and a perchlorate anion. In the cation, the Cu(2+) ion is coordinated by four N atoms from two bidentate 2,2'-bipyridine mol-ecules and an N atom from an isothio-cyanate anion, resulting in a distorted CuN(5) pyramidal configuration. The crystal structure is stabilized by weak inter-molecular C-H⋯O and C-H⋯S hydrogen bonds, and weak π-π inter-actions between 2,2'-bipyridine rings [centroid-centroid distance = 3.908 (4) Å]. The perchlorate counteranion is disordered over two positions in a 0.66:0.34 ratio.Entities:
Year: 2009 PMID: 21577420 PMCID: PMC2969965 DOI: 10.1107/S1600536809031067
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu(NCS)(C10H8N2)2]ClO4 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2091 reflections |
| θ = 2.5–20.5° | |
| µ = 1.23 mm−1 | |
| β = 120.306 (7)° | Block, green |
| 0.21 × 0.15 × 0.13 mm | |
| Bruker SMART CCD area-detector diffractometer | 3917 independent reflections |
| Radiation source: fine-focus sealed tube | 2370 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.1°, θmin = 2.2° |
| Absorption correction: multi-scan ( | |
| 10831 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3917 reflections | (Δ/σ)max < 0.001 |
| 335 parameters | Δρmax = 0.60 e Å−3 |
| 44 restraints | Δρmin = −0.82 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| Cu1 | 0.28304 (4) | 0.52479 (6) | 0.58542 (3) | 0.0504 (2) | |
| S1 | 0.21213 (11) | 0.09251 (15) | 0.69020 (9) | 0.0736 (4) | |
| N1 | 0.4011 (3) | 0.4415 (4) | 0.5796 (2) | 0.0489 (10) | |
| N2 | 0.3811 (3) | 0.7044 (4) | 0.6288 (2) | 0.0478 (9) | |
| N3 | 0.1728 (3) | 0.5378 (4) | 0.4610 (2) | 0.0475 (9) | |
| N4 | 0.1701 (3) | 0.6262 (4) | 0.5907 (2) | 0.0488 (9) | |
| N5 | 0.2680 (3) | 0.3429 (5) | 0.6365 (3) | 0.0659 (12) | |
| C1 | 0.4060 (4) | 0.3036 (5) | 0.5556 (3) | 0.0588 (13) | |
| H1A | 0.3494 | 0.2416 | 0.5375 | 0.071* | |
| C2 | 0.4912 (4) | 0.2495 (6) | 0.5565 (3) | 0.0637 (14) | |
| H2A | 0.4918 | 0.1535 | 0.5381 | 0.076* | |
| C3 | 0.5754 (4) | 0.3400 (6) | 0.5852 (3) | 0.0657 (14) | |
| H3A | 0.6348 | 0.3055 | 0.5875 | 0.079* | |
| C4 | 0.5712 (4) | 0.4814 (5) | 0.6103 (3) | 0.0576 (13) | |
| H4A | 0.6278 | 0.5439 | 0.6300 | 0.069* | |
| C5 | 0.4828 (3) | 0.5312 (5) | 0.6062 (3) | 0.0453 (11) | |
| C6 | 0.4705 (3) | 0.6823 (5) | 0.6308 (3) | 0.0456 (11) | |
| C7 | 0.5427 (4) | 0.7926 (5) | 0.6539 (3) | 0.0552 (13) | |
| H7A | 0.6031 | 0.7753 | 0.6537 | 0.066* | |
| C8 | 0.5246 (4) | 0.9294 (6) | 0.6772 (3) | 0.0651 (14) | |
| H8A | 0.5732 | 1.0050 | 0.6941 | 0.078* | |
| C9 | 0.4346 (4) | 0.9526 (5) | 0.6753 (3) | 0.0666 (14) | |
| H9A | 0.4209 | 1.0440 | 0.6911 | 0.080* | |
| C10 | 0.3643 (4) | 0.8385 (5) | 0.6498 (3) | 0.0584 (13) | |
| H10A | 0.3021 | 0.8559 | 0.6471 | 0.070* | |
| C11 | 0.1745 (4) | 0.4783 (5) | 0.3972 (3) | 0.0570 (13) | |
| H11A | 0.2310 | 0.4217 | 0.4067 | 0.068* | |
| C12 | 0.0976 (4) | 0.4968 (5) | 0.3191 (3) | 0.0642 (14) | |
| H12A | 0.1007 | 0.4517 | 0.2764 | 0.077* | |
| C13 | 0.0156 (4) | 0.5828 (6) | 0.3046 (3) | 0.0702 (15) | |
| H13A | −0.0374 | 0.5987 | 0.2516 | 0.084* | |
| C14 | 0.0126 (4) | 0.6453 (5) | 0.3689 (3) | 0.0617 (14) | |
| H14A | −0.0424 | 0.7049 | 0.3600 | 0.074* | |
| C15 | 0.0910 (3) | 0.6196 (5) | 0.4464 (3) | 0.0462 (11) | |
| C16 | 0.0909 (3) | 0.6708 (5) | 0.5202 (3) | 0.0467 (11) | |
| C17 | 0.0122 (4) | 0.7529 (6) | 0.5185 (3) | 0.0660 (15) | |
| H17A | −0.0420 | 0.7867 | 0.4694 | 0.079* | |
| C18 | 0.0157 (4) | 0.7834 (6) | 0.5909 (4) | 0.0721 (16) | |
| H18A | −0.0365 | 0.8384 | 0.5908 | 0.087* | |
| C19 | 0.0945 (4) | 0.7339 (5) | 0.6616 (4) | 0.0675 (15) | |
| H19A | 0.0970 | 0.7527 | 0.7107 | 0.081* | |
| C20 | 0.1706 (4) | 0.6553 (5) | 0.6597 (3) | 0.0612 (14) | |
| H20A | 0.2250 | 0.6206 | 0.7085 | 0.073* | |
| C21 | 0.2448 (3) | 0.2379 (5) | 0.6594 (3) | 0.0514 (12) | |
| Cl1 | 0.24431 (10) | 0.98729 (15) | 0.40224 (9) | 0.0726 (4) | |
| O1' | 0.1951 (6) | 1.1109 (9) | 0.4087 (6) | 0.190 (5) | 0.66 |
| O2' | 0.1768 (7) | 0.8670 (8) | 0.3661 (5) | 0.193 (5) | 0.66 |
| O3' | 0.3286 (6) | 0.9451 (11) | 0.4777 (4) | 0.177 (5) | 0.66 |
| O4' | 0.2788 (8) | 1.0206 (15) | 0.3457 (6) | 0.268 (7) | 0.66 |
| O1 | 0.1870 (7) | 0.9781 (12) | 0.4423 (6) | 0.0755 (10) | 0.34 |
| O2 | 0.2143 (8) | 0.8817 (10) | 0.3404 (6) | 0.0728 (10) | 0.34 |
| O3 | 0.3518 (6) | 0.9693 (14) | 0.4598 (7) | 0.0730 (10) | 0.34 |
| O4 | 0.2356 (9) | 1.1359 (8) | 0.3709 (6) | 0.0730 (10) | 0.34 |
| Cu1 | 0.0461 (4) | 0.0518 (4) | 0.0585 (4) | 0.0054 (3) | 0.0303 (3) | 0.0020 (3) |
| S1 | 0.0721 (10) | 0.0594 (9) | 0.1024 (12) | 0.0078 (7) | 0.0536 (9) | 0.0197 (8) |
| N1 | 0.049 (2) | 0.045 (2) | 0.057 (2) | 0.0044 (19) | 0.030 (2) | −0.0022 (19) |
| N2 | 0.047 (2) | 0.043 (2) | 0.056 (3) | 0.0038 (18) | 0.028 (2) | −0.0002 (19) |
| N3 | 0.046 (2) | 0.052 (2) | 0.051 (2) | 0.0014 (19) | 0.029 (2) | 0.0017 (19) |
| N4 | 0.047 (2) | 0.054 (2) | 0.054 (3) | 0.0036 (19) | 0.032 (2) | 0.001 (2) |
| N5 | 0.058 (3) | 0.068 (3) | 0.077 (3) | 0.003 (2) | 0.038 (3) | 0.009 (2) |
| C1 | 0.063 (3) | 0.048 (3) | 0.071 (4) | 0.004 (3) | 0.038 (3) | −0.003 (3) |
| C2 | 0.071 (4) | 0.054 (3) | 0.074 (4) | 0.018 (3) | 0.042 (3) | 0.001 (3) |
| C3 | 0.057 (4) | 0.073 (4) | 0.075 (4) | 0.020 (3) | 0.039 (3) | 0.002 (3) |
| C4 | 0.043 (3) | 0.066 (3) | 0.064 (3) | 0.006 (2) | 0.027 (3) | 0.000 (3) |
| C5 | 0.040 (3) | 0.049 (3) | 0.047 (3) | 0.004 (2) | 0.022 (2) | 0.003 (2) |
| C6 | 0.041 (3) | 0.051 (3) | 0.039 (3) | 0.004 (2) | 0.016 (2) | 0.004 (2) |
| C7 | 0.042 (3) | 0.058 (3) | 0.063 (3) | −0.003 (2) | 0.024 (3) | −0.003 (3) |
| C8 | 0.052 (3) | 0.056 (3) | 0.075 (4) | −0.007 (3) | 0.023 (3) | −0.003 (3) |
| C9 | 0.077 (4) | 0.050 (3) | 0.065 (4) | 0.005 (3) | 0.031 (3) | −0.009 (3) |
| C10 | 0.056 (3) | 0.053 (3) | 0.071 (4) | 0.006 (3) | 0.036 (3) | −0.002 (3) |
| C11 | 0.059 (3) | 0.065 (3) | 0.061 (3) | 0.002 (3) | 0.040 (3) | 0.000 (3) |
| C12 | 0.070 (4) | 0.078 (4) | 0.057 (4) | −0.012 (3) | 0.041 (3) | −0.008 (3) |
| C13 | 0.056 (4) | 0.090 (4) | 0.057 (4) | −0.013 (3) | 0.022 (3) | 0.007 (3) |
| C14 | 0.048 (3) | 0.072 (4) | 0.061 (4) | 0.005 (3) | 0.024 (3) | 0.006 (3) |
| C15 | 0.044 (3) | 0.042 (3) | 0.056 (3) | −0.001 (2) | 0.028 (3) | 0.002 (2) |
| C16 | 0.037 (3) | 0.047 (3) | 0.058 (3) | −0.001 (2) | 0.026 (3) | −0.002 (2) |
| C17 | 0.049 (3) | 0.072 (4) | 0.075 (4) | 0.013 (3) | 0.030 (3) | 0.004 (3) |
| C18 | 0.063 (4) | 0.070 (4) | 0.103 (5) | 0.004 (3) | 0.057 (4) | −0.014 (4) |
| C19 | 0.075 (4) | 0.065 (4) | 0.085 (4) | −0.009 (3) | 0.057 (4) | −0.013 (3) |
| C20 | 0.063 (3) | 0.069 (3) | 0.060 (3) | 0.000 (3) | 0.037 (3) | −0.002 (3) |
| C21 | 0.040 (3) | 0.053 (3) | 0.064 (3) | 0.010 (2) | 0.029 (3) | 0.001 (3) |
| Cl1 | 0.0573 (8) | 0.0714 (9) | 0.0791 (10) | 0.0056 (7) | 0.0270 (8) | −0.0106 (7) |
| O1' | 0.128 (7) | 0.134 (7) | 0.300 (13) | 0.047 (6) | 0.102 (8) | −0.069 (7) |
| O2' | 0.201 (10) | 0.176 (8) | 0.174 (9) | −0.140 (8) | 0.072 (7) | −0.028 (7) |
| O3' | 0.183 (9) | 0.215 (10) | 0.062 (5) | 0.082 (8) | 0.008 (6) | 0.001 (5) |
| O4' | 0.224 (13) | 0.41 (2) | 0.259 (14) | −0.040 (12) | 0.189 (13) | 0.037 (12) |
| O1 | 0.0592 (14) | 0.0735 (14) | 0.0817 (15) | 0.0063 (13) | 0.0267 (13) | −0.0106 (13) |
| O2 | 0.0582 (14) | 0.0710 (14) | 0.0786 (15) | 0.0059 (13) | 0.0266 (13) | −0.0119 (13) |
| O3 | 0.0569 (13) | 0.0713 (14) | 0.0797 (15) | 0.0063 (13) | 0.0263 (13) | −0.0118 (13) |
| O4 | 0.0577 (13) | 0.0715 (14) | 0.0796 (15) | 0.0058 (13) | 0.0270 (13) | −0.0097 (13) |
| Cu1—N5 | 1.968 (4) | C11—C12 | 1.360 (7) |
| Cu1—N4 | 1.985 (3) | C11—H11A | 0.9300 |
| Cu1—N1 | 1.992 (4) | C12—C13 | 1.365 (6) |
| Cu1—N2 | 2.058 (4) | C12—H12A | 0.9300 |
| Cu1—N3 | 2.102 (4) | C13—C14 | 1.369 (6) |
| S1—C21 | 1.605 (5) | C13—H13A | 0.9300 |
| N1—C1 | 1.331 (5) | C14—C15 | 1.368 (6) |
| N1—C5 | 1.342 (5) | C14—H14A | 0.9300 |
| N2—C10 | 1.331 (5) | C15—C16 | 1.478 (6) |
| N2—C6 | 1.349 (5) | C16—C17 | 1.387 (6) |
| N3—C11 | 1.339 (5) | C17—C18 | 1.380 (7) |
| N3—C15 | 1.342 (5) | C17—H17A | 0.9300 |
| N4—C16 | 1.332 (5) | C18—C19 | 1.347 (7) |
| N4—C20 | 1.335 (5) | C18—H18A | 0.9300 |
| N5—C21 | 1.163 (5) | C19—C20 | 1.368 (6) |
| C1—C2 | 1.371 (6) | C19—H19A | 0.9300 |
| C1—H1A | 0.9300 | C20—H20A | 0.9300 |
| C2—C3 | 1.371 (6) | Cl1—O1' | 1.374 (5) |
| C2—H2A | 0.9300 | Cl1—O2 | 1.395 (7) |
| C3—C4 | 1.366 (6) | Cl1—O2' | 1.403 (5) |
| C3—H3A | 0.9300 | Cl1—O3' | 1.409 (5) |
| C4—C5 | 1.376 (6) | Cl1—O1 | 1.419 (6) |
| C4—H4A | 0.9300 | Cl1—O4 | 1.437 (7) |
| C5—C6 | 1.473 (6) | Cl1—O3 | 1.442 (7) |
| C6—C7 | 1.372 (6) | Cl1—O4' | 1.446 (6) |
| C7—C8 | 1.377 (6) | O1'—O4 | 1.180 (11) |
| C7—H7A | 0.9300 | O1'—O1 | 1.385 (11) |
| C8—C9 | 1.362 (7) | O2'—O2 | 0.927 (11) |
| C8—H8A | 0.9300 | O2'—O1 | 1.701 (11) |
| C9—C10 | 1.375 (6) | O3'—O3 | 0.638 (17) |
| C9—H9A | 0.9300 | O4'—O4 | 1.429 (12) |
| C10—H10A | 0.9300 | O4'—O2 | 1.553 (12) |
| N5—Cu1—N4 | 92.02 (16) | N3—C15—C16 | 114.5 (4) |
| N5—Cu1—N1 | 92.83 (16) | C14—C15—C16 | 123.8 (4) |
| N4—Cu1—N1 | 174.75 (15) | N4—C16—C17 | 120.5 (4) |
| N5—Cu1—N2 | 133.48 (16) | N4—C16—C15 | 115.7 (4) |
| N4—Cu1—N2 | 95.11 (14) | C17—C16—C15 | 123.7 (5) |
| N1—Cu1—N2 | 80.08 (15) | C18—C17—C16 | 118.9 (5) |
| N5—Cu1—N3 | 112.25 (16) | C18—C17—H17A | 120.6 |
| N4—Cu1—N3 | 79.43 (15) | C16—C17—H17A | 120.6 |
| N1—Cu1—N3 | 100.55 (14) | C19—C18—C17 | 120.1 (5) |
| N2—Cu1—N3 | 114.25 (14) | C19—C18—H18A | 119.9 |
| C1—N1—C5 | 119.0 (4) | C17—C18—H18A | 119.9 |
| C1—N1—Cu1 | 125.0 (3) | C18—C19—C20 | 118.5 (5) |
| C5—N1—Cu1 | 116.0 (3) | C18—C19—H19A | 120.8 |
| C10—N2—C6 | 117.8 (4) | C20—C19—H19A | 120.8 |
| C10—N2—Cu1 | 128.0 (3) | N4—C20—C19 | 122.7 (5) |
| C6—N2—Cu1 | 114.1 (3) | N4—C20—H20A | 118.7 |
| C11—N3—C15 | 117.8 (4) | C19—C20—H20A | 118.7 |
| C11—N3—Cu1 | 129.2 (3) | N5—C21—S1 | 179.5 (6) |
| C15—N3—Cu1 | 112.9 (3) | O1'—Cl1—O2 | 131.4 (6) |
| C16—N4—C20 | 119.3 (4) | O1'—Cl1—O2' | 111.6 (5) |
| C16—N4—Cu1 | 116.5 (3) | O2—Cl1—O2' | 38.7 (5) |
| C20—N4—Cu1 | 124.2 (3) | O1'—Cl1—O3' | 112.2 (5) |
| C21—N5—Cu1 | 170.6 (4) | O2—Cl1—O3' | 114.9 (6) |
| N1—C1—C2 | 122.6 (5) | O2'—Cl1—O3' | 110.8 (5) |
| N1—C1—H1A | 118.7 | O1'—Cl1—O1 | 59.4 (5) |
| C2—C1—H1A | 118.7 | O2—Cl1—O1 | 112.8 (6) |
| C1—C2—C3 | 118.5 (5) | O2'—Cl1—O1 | 74.1 (5) |
| C1—C2—H2A | 120.7 | O3'—Cl1—O1 | 85.6 (5) |
| C3—C2—H2A | 120.7 | O1'—Cl1—O4 | 49.6 (5) |
| C4—C3—C2 | 119.2 (5) | O2—Cl1—O4 | 110.7 (6) |
| C4—C3—H3A | 120.4 | O2'—Cl1—O4 | 128.0 (6) |
| C2—C3—H3A | 120.4 | O3'—Cl1—O4 | 121.2 (6) |
| C3—C4—C5 | 119.8 (5) | O1—Cl1—O4 | 108.9 (5) |
| C3—C4—H4A | 120.1 | O1'—Cl1—O3 | 118.5 (7) |
| C5—C4—H4A | 120.1 | O2—Cl1—O3 | 109.2 (6) |
| N1—C5—C4 | 120.9 (4) | O2'—Cl1—O3 | 123.4 (7) |
| N1—C5—C6 | 115.4 (4) | O3'—Cl1—O3 | 25.8 (7) |
| C4—C5—C6 | 123.8 (4) | O1—Cl1—O3 | 110.4 (6) |
| N2—C6—C7 | 122.0 (4) | O4—Cl1—O3 | 104.5 (6) |
| N2—C6—C5 | 114.3 (4) | O1'—Cl1—O4' | 108.5 (5) |
| C7—C6—C5 | 123.6 (4) | O2—Cl1—O4' | 66.3 (6) |
| C6—C7—C8 | 119.2 (4) | O2'—Cl1—O4' | 104.0 (5) |
| C6—C7—H7A | 120.4 | O3'—Cl1—O4' | 109.4 (5) |
| C8—C7—H7A | 120.4 | O1—Cl1—O4' | 164.2 (6) |
| C9—C8—C7 | 119.1 (5) | O4—Cl1—O4' | 59.4 (5) |
| C9—C8—H8A | 120.4 | O3—Cl1—O4' | 84.0 (7) |
| C7—C8—H8A | 120.4 | O4—O1'—Cl1 | 68.0 (4) |
| C8—C9—C10 | 118.8 (5) | O4—O1'—O1 | 129.8 (6) |
| C8—C9—H9A | 120.6 | Cl1—O1'—O1 | 61.9 (4) |
| C10—C9—H9A | 120.6 | O2—O2'—Cl1 | 70.2 (6) |
| N2—C10—C9 | 123.0 (5) | O2—O2'—O1 | 123.5 (7) |
| N2—C10—H10A | 118.5 | Cl1—O2'—O1 | 53.4 (3) |
| C9—C10—H10A | 118.5 | O3—O3'—Cl1 | 80.0 (9) |
| N3—C11—C12 | 123.1 (5) | O4—O4'—Cl1 | 60.0 (4) |
| N3—C11—H11A | 118.4 | O4—O4'—O2 | 102.7 (6) |
| C12—C11—H11A | 118.4 | Cl1—O4'—O2 | 55.3 (4) |
| C11—C12—C13 | 118.7 (5) | O1'—O1—Cl1 | 58.7 (4) |
| C11—C12—H12A | 120.7 | O1'—O1—O2' | 95.7 (6) |
| C13—C12—H12A | 120.7 | Cl1—O1—O2' | 52.5 (3) |
| C12—C13—C14 | 119.2 (5) | O2'—O2—Cl1 | 71.1 (6) |
| C12—C13—H13A | 120.4 | O2'—O2—O4' | 127.8 (8) |
| C14—C13—H13A | 120.4 | Cl1—O2—O4' | 58.4 (4) |
| C15—C14—C13 | 119.6 (5) | O3'—O3—Cl1 | 74.2 (9) |
| C15—C14—H14A | 120.2 | O1'—O4—O4' | 122.4 (7) |
| C13—C14—H14A | 120.2 | O1'—O4—Cl1 | 62.4 (4) |
| N3—C15—C14 | 121.6 (4) | O4'—O4—Cl1 | 60.6 (4) |
| H··· | ||||
| C7—H7A···O4'i | 0.93 | 2.55 | 3.176 (15) | 125 |
| C10—H10A···S1ii | 0.93 | 2.85 | 3.587 (6) | 137 |
| C18—H18A···O1'iii | 0.93 | 2.45 | 3.335 (13) | 159 |
Selected geometric parameters (Å, °)
| Cu1—N5 | 1.968 (4) |
| Cu1—N4 | 1.985 (3) |
| Cu1—N1 | 1.992 (4) |
| Cu1—N2 | 2.058 (4) |
| Cu1—N3 | 2.102 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C7—H7 | 0.93 | 2.55 | 3.176 (15) | 125 |
| C10—H10 | 0.93 | 2.85 | 3.587 (6) | 137 |
| C18—H18 | 0.93 | 2.45 | 3.335 (13) | 159 |
Symmetry codes: (i) ; (ii) ; (iii) .