Literature DB >> 21575572

A multipoint hydrogen-bond network underlying KcsA C-type inactivation.

Julio F Cordero-Morales1, Vishwanath Jogini, Sudha Chakrapani, Eduardo Perozo.   

Abstract

In the prokaryotic potassium channel KcsA activation gating at the inner bundle gate is followed by C-type inactivation at the selectivity filter. Entry into the C-type inactivated state has been directly linked to the strength of the H-bond interaction between residues Glu-71 and Asp-80 behind the filter, and is allosterically triggered by the rearrangement of the inner bundle gate. Here, we show that H-bond pairing between residues Trp-67 and Asp-80, conserved in most K⁺ channels, constitutes another critical interaction that determines the rate and extent of KcsA C-type inactivation. Disruption of the equivalent interaction in Shaker (Trp-434-Asp-447) and Kv1.2 (Trp-366-Asp-379) leads also to modulation of the inactivation process, suggesting that these residues also play an analogous role in the inactivation gating of Kv channels. The present results show that in KcsA C-type inactivation gating is governed by a multipoint hydrogen-bond network formed by the triad Trp-67-Glu71-Asp-80. This triad exerts a critical role in the dynamics and conformational stability of the selectivity filter and might serve as a general modulator of selectivity filter gating in other members of the K⁺ channel family.
Copyright © 2011 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21575572      PMCID: PMC3093550          DOI: 10.1016/j.bpj.2011.01.073

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  41 in total

1.  Chemistry of ion coordination and hydration revealed by a K+ channel-Fab complex at 2.0 A resolution.

Authors:  Y Zhou; J H Morais-Cabral; A Kaufman; R MacKinnon
Journal:  Nature       Date:  2001-11-01       Impact factor: 49.962

2.  Sequence-function analysis of the K+-selective family of ion channels using a comprehensive alignment and the KcsA channel structure.

Authors:  Robin T Shealy; Anuradha D Murphy; Rampriya Ramarathnam; Eric Jakobsson; Shankar Subramaniam
Journal:  Biophys J       Date:  2003-05       Impact factor: 4.033

3.  Energetics of pore opening in a voltage-gated K(+) channel.

Authors:  Ofer Yifrach; Roderick MacKinnon
Journal:  Cell       Date:  2002-10-18       Impact factor: 41.582

4.  The pore helix is involved in stabilizing the open state of inwardly rectifying K+ channels.

Authors:  Noga Alagem; Semen Yesylevskyy; Eitan Reuveny
Journal:  Biophys J       Date:  2003-07       Impact factor: 4.033

5.  Biophysical and molecular mechanisms of Shaker potassium channel inactivation.

Authors:  T Hoshi; W N Zagotta; R W Aldrich
Journal:  Science       Date:  1990-10-26       Impact factor: 47.728

6.  Gating currents from a nonconducting mutant reveal open-closed conformations in Shaker K+ channels.

Authors:  E Perozo; R MacKinnon; F Bezanilla; E Stefani
Journal:  Neuron       Date:  1993-08       Impact factor: 17.173

7.  Mutations in the K+ channel signature sequence.

Authors:  L Heginbotham; Z Lu; T Abramson; R MacKinnon
Journal:  Biophys J       Date:  1994-04       Impact factor: 4.033

8.  Structural mechanism of C-type inactivation in K(+) channels.

Authors:  Luis G Cuello; Vishwanath Jogini; D Marien Cortes; Eduardo Perozo
Journal:  Nature       Date:  2010-07-08       Impact factor: 49.962

9.  Modified reconstitution method used in patch-clamp studies of Escherichia coli ion channels.

Authors:  A H Delcour; B Martinac; J Adler; C Kung
Journal:  Biophys J       Date:  1989-09       Impact factor: 4.033

10.  Negative conductance caused by entry of sodium and cesium ions into the potassium channels of squid axons.

Authors:  F Bezanilla; C M Armstrong
Journal:  J Gen Physiol       Date:  1972-11       Impact factor: 4.086

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  61 in total

Review 1.  Modes of glutamate receptor gating.

Authors:  Gabriela K Popescu
Journal:  J Physiol       Date:  2011-11-21       Impact factor: 5.182

2.  TWIK1, a unique background channel with variable ion selectivity.

Authors:  Franck C Chatelain; Delphine Bichet; Dominique Douguet; Sylvain Feliciangeli; Saïd Bendahhou; Markus Reichold; Richard Warth; Jacques Barhanin; Florian Lesage
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-19       Impact factor: 11.205

3.  Residues at the outer mouth of Kir1.1 determine K-dependent gating.

Authors:  Henry Sackin; Mikheil Nanazashvili; Hui Li; Lawrence G Palmer; Lei Yang
Journal:  Biophys J       Date:  2012-06-19       Impact factor: 4.033

4.  Pore helix-S6 interactions are critical in governing current amplitudes of KCNQ3 K+ channels.

Authors:  Frank S Choveau; Sonya M Bierbower; Mark S Shapiro
Journal:  Biophys J       Date:  2012-06-05       Impact factor: 4.033

5.  Pore determinants of KCNQ3 K+ current expression.

Authors:  Frank S Choveau; Ciria C Hernandez; Sonya M Bierbower; Mark S Shapiro
Journal:  Biophys J       Date:  2012-06-05       Impact factor: 4.033

6.  Mechanism of Cd2+ coordination during slow inactivation in potassium channels.

Authors:  H Raghuraman; Julio F Cordero-Morales; Vishwanath Jogini; Albert C Pan; Astrid Kollewe; Benoît Roux; Eduardo Perozo
Journal:  Structure       Date:  2012-07-05       Impact factor: 5.006

7.  Transmembrane allosteric coupling of the gates in a potassium channel.

Authors:  Benjamin J Wylie; Manasi P Bhate; Ann E McDermott
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-16       Impact factor: 11.205

8.  Using protein backbone mutagenesis to dissect the link between ion occupancy and C-type inactivation in K+ channels.

Authors:  Kimberly Matulef; Alexander G Komarov; Corey A Costantino; Francis I Valiyaveetil
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-15       Impact factor: 11.205

9.  Semisynthetic K+ channels show that the constricted conformation of the selectivity filter is not the C-type inactivated state.

Authors:  Prasanna K Devaraneni; Alexander G Komarov; Corey A Costantino; Jordan J Devereaux; Kimberly Matulef; Francis I Valiyaveetil
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-09       Impact factor: 11.205

Review 10.  Altered and dynamic ion selectivity of K+ channels in cell development and excitability.

Authors:  Haijun Chen; Franck C Chatelain; Florian Lesage
Journal:  Trends Pharmacol Sci       Date:  2014-07-09       Impact factor: 14.819

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