Literature DB >> 21575181

Analysis of the unique structural and physicochemical properties of the DraD/AfaD invasin in the context of its belonging to the family of chaperone/usher type fimbrial subunits.

Rafał J Piątek1, Piotr Bruździak, Beata M Zalewska-Piątek, Marek A Wojciechowski, Justyna M Namieśnik, Józef W Kur.   

Abstract

BACKGROUND: DraD invasin encoded by the dra operon possesses a classical structure characteristic to fimbrial subunits of the chaperone/usher type. The Ig-fold of the DraD possesses two major characteristics distinguishing it from the family of fimbrial subunits: 1) a distortion of the β-barrel structure in the region of the acceptor cleft, demonstrated by a disturbance of the main-chain hydrogen bonds network, and 2) an unusually located disulfide bond connecting B and F strands - the localization exclusively observed in the subfamily of DraD/AfaD-type subunits.
RESULTS: To evaluate the influence of the DraD-sc specific structural features on its stability and mechanism of thermal denaturation, a series of DSC and FT-IR denaturation experiments were performed giving following conclusions. 1) The DraD-sc is characterized by a low stability (standard Gibbs free energy and enthalpy of unfolding of 18.4 ±1.4 kJ mol(-1) and 131 ±25 kJ mol(-1), respectively) that contrasts strongly with almost infinite stability of the described previously DraE-sc fimbrial protein. 2) The DraD-sc unfolds thermally according to the two state equilibrium model, in contrast to the irreversible kinetically controlled transition of the DraE-sc. 3) The DraD specific disulfide bond is crucial at the folding stage and has little stability effect in the mature protein.
CONCLUSIONS: Data published so far emphasize unique biological properties of the DraD invasin as fimbrial subunit: a chaperone independent folding, an usher independent surface localization and the possibility to exist in two forms: as unbound subunits and as loosely bound at fimbrial tip.Presented calorimetric and FT-IR stability data combined with structural correlations has underlined that the DraD invasin is also characterized by unique physicochemical and structural attributes in the context of its belonging to the family of fimbrial subunits.

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Year:  2011        PMID: 21575181      PMCID: PMC3112383          DOI: 10.1186/1472-6807-11-25

Source DB:  PubMed          Journal:  BMC Struct Biol        ISSN: 1472-6807


  41 in total

1.  PapD-like chaperones provide the missing information for folding of pilin proteins.

Authors:  M M Barnhart; J S Pinkner; G E Soto; F G Sauer; S Langermann; G Waksman; C Frieden; S J Hultgren
Journal:  Proc Natl Acad Sci U S A       Date:  2000-07-05       Impact factor: 11.205

2.  Identification of amino acids in the Dr adhesin required for binding to decay-accelerating factor.

Authors:  Cristina P Van Loy; Evgeni V Sokurenko; Ram Samudrala; Steve L Moseley
Journal:  Mol Microbiol       Date:  2002-07       Impact factor: 3.501

3.  Resolving the energy paradox of chaperone/usher-mediated fibre assembly.

Authors:  Anton V Zavialov; Vladimir M Tischenko; Laura J Fooks; Bjørn O Brandsdal; Johan Aqvist; Vladimir P Zav'yalov; Sheila Macintyre; Stefan D Knight
Journal:  Biochem J       Date:  2005-08-01       Impact factor: 3.857

Review 4.  Evolution of the chaperone/usher assembly pathway: fimbrial classification goes Greek.

Authors:  Sean-Paul Nuccio; Andreas J Bäumler
Journal:  Microbiol Mol Biol Rev       Date:  2007-12       Impact factor: 11.056

5.  Infinite kinetic stability against dissociation of supramolecular protein complexes through donor strand complementation.

Authors:  Chasper Puorger; Oliv Eidam; Guido Capitani; Denis Erilov; Markus G Grütter; Rudi Glockshuber
Journal:  Structure       Date:  2008-04       Impact factor: 5.006

6.  A comparison between the sulfhydryl reductants tris(2-carboxyethyl)phosphine and dithiothreitol for use in protein biochemistry.

Authors:  E B Getz; M Xiao; T Chakrabarty; R Cooke; P R Selvin
Journal:  Anal Biochem       Date:  1999-08-15       Impact factor: 3.365

7.  A surface-exposed DraD protein of uropathogenic Escherichia coli bearing Dr fimbriae may be expressed and secreted independently from DraC usher and DraE adhesin.

Authors:  Beata Zalewska; Rafał Piątek; Katarzyna Bury; Alfred Samet; Bogdan Nowicki; Stella Nowicki; Józef Kur
Journal:  Microbiology (Reading)       Date:  2005-07       Impact factor: 2.777

8.  The tyrosine corner: a feature of most Greek key beta-barrel proteins.

Authors:  J M Hemmingsen; K M Gernert; J S Richardson; D C Richardson
Journal:  Protein Sci       Date:  1994-11       Impact factor: 6.725

9.  The solution structure of the invasive tip complex from Afa/Dr fibrils.

Authors:  Ernesto Cota; Celine Jones; Peter Simpson; Harri Altroff; Kirstine L Anderson; Laurence du Merle; Julie Guignot; Alain Servin; Chantal Le Bouguénec; Helen Mardon; Stephen Matthews
Journal:  Mol Microbiol       Date:  2006-09-08       Impact factor: 3.501

10.  ProTherm and ProNIT: thermodynamic databases for proteins and protein-nucleic acid interactions.

Authors:  M D Shaji Kumar; K Abdulla Bava; M Michael Gromiha; Ponraj Prabakaran; Koji Kitajima; Hatsuho Uedaira; Akinori Sarai
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

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  2 in total

Review 1.  Pathogenesis of human diffusely adhering Escherichia coli expressing Afa/Dr adhesins (Afa/Dr DAEC): current insights and future challenges.

Authors:  Alain L Servin
Journal:  Clin Microbiol Rev       Date:  2014-10       Impact factor: 26.132

2.  PI3K/Akt pathway restricts epithelial adhesion of Dr + Escherichia coli by down-regulating the expression of decay accelerating factor.

Authors:  Manu Banadakoppa; Pawel Goluszko; Daniel Liebenthal; Bogdan J Nowicki; Stella Nowicki; Chandra Yallampalli
Journal:  Exp Biol Med (Maywood)       Date:  2014-03-05
  2 in total

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