Literature DB >> 21574622

Quantum-chemical simulation of 1H NMR spectra. 2. Comparison of DFT-based procedures for computing proton-proton coupling constants in organic molecules.

Thomas Bally1, Paul R Rablen.   

Abstract

The performance of 250 different computational protocols (combinations of density functionals, basis sets and methods) was assessed on a set of 165 well-established experimental (1)H-(1)H nuclear coupling constants (J(H-H)) from 65 molecules spanning a wide range of "chemical space". Thereby we found that, if one uses core-augmented basis sets and allows for linear scaling of the raw results, calculations of only the Fermi contact term yield more accurate predictions than calculations where all four terms that contribute to J(H-H) are evaluated. It turns out that B3LYP/6-31G(d,p)u+1s is the best (and, in addition, one of the most economical) of all tested methods, yielding predictions of J(H-H) with a root-mean-square deviation from experiment of less than 0.5 Hz for our test set. Another method that does similarly well, without the need for additional 1s basis functions, is B3LYP/cc-pVTZ, which is, however, ca. 8 times more "expensive" in terms of CPU time. A selection of the better methods was tested on a probe set comprising 61 J(H-H) values from 37 molecules. In this set we also included five molecules where conformational averaging is required. The rms deviations were better than or equal to those with the training set, which indicates that the method we recommend is generally applicable for organic molecules. We give instructions on how to carry out calculations of (1)H chemical shifts and J(H-H) most economically and provide scripts to extract the relevant information from the outputs of calculations with the Gaussian program in clearly arranged form, e.g., to feed them into programs for simulating entire (1)H NMR spectra.

Entities:  

Year:  2011        PMID: 21574622     DOI: 10.1021/jo200513q

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  24 in total

1.  Questioning the γ-gauche effect: stereoassignment of 1,3-disubstituted-tetrahydro-β-carbolines using 1H-1H coupling constants.

Authors:  Kristýna Cagašová; Maryam Ghavami; Zhong-Ke Yao; Paul R Carlier
Journal:  Org Biomol Chem       Date:  2019-06-24       Impact factor: 3.876

2.  Spectroscopic and quantum mechanical investigation of N,N'-bisarylmalonamides: solvent and structural effects.

Authors:  Violeta M Arsovski; Bojan Đ Božić; Jelena M Mirković; Vesna D Vitnik; Zeljko J Vitnik; Walter M F Fabian; Slobodan D Petrović; Dušan Z Mijin
Journal:  J Mol Model       Date:  2014-08-14       Impact factor: 1.810

Review 3.  Applications of NMR spectroscopy to systems biochemistry.

Authors:  Teresa W-M Fan; Andrew N Lane
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2016-02-06       Impact factor: 9.795

4.  Analysis of seven-membered lactones by computational NMR methods: proton NMR chemical shift data are more discriminating than carbon.

Authors:  Daniel J Marell; Susanna J Emond; Aman Kulshrestha; Thomas R Hoye
Journal:  J Org Chem       Date:  2014-01-06       Impact factor: 4.354

5.  A non-Karplus effect: evidence from phosphorus heterocycles and DFT calculations of the dependence of vicinal phosphorus-hydrogen NMR coupling constants on lone-pair conformation.

Authors:  William H Hersh; Sherrell T Lam; Daniel J Moskovic; Antonios J Panagiotakis
Journal:  J Org Chem       Date:  2012-05-23       Impact factor: 4.354

6.  DFT calculations of 1H- and 13C-NMR chemical shifts of 3-methyl-1-phenyl-4-(phenyldiazenyl)-1H-pyrazol-5-amine in solution.

Authors:  Zaki S Safi; Nuha Wazzan
Journal:  Sci Rep       Date:  2022-10-22       Impact factor: 4.996

7.  A guide to small-molecule structure assignment through computation of (¹H and ¹³C) NMR chemical shifts.

Authors:  Patrick H Willoughby; Matthew J Jansma; Thomas R Hoye
Journal:  Nat Protoc       Date:  2014-02-20       Impact factor: 13.491

8.  Photoassisted access to enantiopure conformationally locked ribofuranosylamines spiro-linked to oxazolidino-diketopiperazines.

Authors:  Nitin S Nandurkar; N N Bhuvan Kumar; Olga A Mukhina; Andrei G Kutateladze
Journal:  ACS Comb Sci       Date:  2012-12-04       Impact factor: 3.784

9.  Prediction of 19F NMR Chemical Shifts for Fluorinated Aromatic Compounds.

Authors:  Carla Saunders; Mohammad B Khaled; Jimmie D Weaver; Dean J Tantillo
Journal:  J Org Chem       Date:  2018-02-26       Impact factor: 4.354

10.  Defluorodearomatization: A Photocatalytic Birch-Like Reduction That Enables C-C Bond Formation and Provides Access to Unnatural Cannabinoids.

Authors:  Jon I Day; Sascha Grotjahn; Sameera Senaweera; Burkhard Koenig; Jimmie D Weaver Iii
Journal:  J Org Chem       Date:  2021-06-02       Impact factor: 4.354

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