Literature DB >> 21568716

Mapping fetal brain development in utero using magnetic resonance imaging: the Big Bang of brain mapping.

Colin Studholme1.   

Abstract

The development of tools to construct and investigate probabilistic maps of the adult human brain from magnetic resonance imaging (MRI) has led to advances in both basic neuroscience and clinical diagnosis. These tools are increasingly being applied to brain development in adolescence and childhood, and even to neonatal and premature neonatal imaging. Even earlier in development, parallel advances in clinical fetal MRI have led to its growing use as a tool in challenging medical conditions. This has motivated new engineering developments encompassing optimal fast MRI scans and techniques derived from computer vision, the combination of which allows full 3D imaging of the moving fetal brain in utero without sedation. These promise to provide a new and unprecedented window into early human brain growth. This article reviews the developments that have led us to this point, examines the current state of the art in the fields of fast fetal imaging and motion correction, and describes the tools to analyze dynamically changing fetal brain structure. New methods to deal with developmental tissue segmentation and the construction of spatiotemporal atlases are examined, together with techniques to map fetal brain growth patterns.

Entities:  

Mesh:

Year:  2011        PMID: 21568716      PMCID: PMC3682118          DOI: 10.1146/annurev-bioeng-071910-124654

Source DB:  PubMed          Journal:  Annu Rev Biomed Eng        ISSN: 1523-9829            Impact factor:   9.590


  149 in total

1.  Qualitative and quantitative evaluation of six algorithms for correcting intensity nonuniformity effects.

Authors:  J B Arnold; J S Liow; K A Schaper; J J Stern; J G Sled; D W Shattuck; A J Worth; M S Cohen; R M Leahy; J C Mazziotta; D A Rottenberg
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Review 2.  First principles of fast spin echo.

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3.  FLASH imaging: rapid NMR imaging using low flip-angle pulses. 1986.

Authors:  A Haase; J Frahm; D Matthaei; W Hänicke; K-D Merboldt
Journal:  J Magn Reson       Date:  2011-12       Impact factor: 2.229

4.  Automatic segmentation of MR images of the developing newborn brain.

Authors:  Marcel Prastawa; John H Gilmore; Weili Lin; Guido Gerig
Journal:  Med Image Anal       Date:  2005-10       Impact factor: 8.545

5.  Morphological regionalization using fetal magnetic resonance images of normal developing brains.

Authors:  Hui-Hsin Hu; Wan-Yuo Guo; Hui-Yun Chen; Po-Shan Wang; Chih-I Hung; Jen-Chuen Hsieh; Yu-Te Wu
Journal:  Eur J Neurosci       Date:  2009-04       Impact factor: 3.386

6.  Deformable mosaicing for whole-body MRI.

Authors:  Christian Wachinger; Ben Glocker; Jochen Zeltner; Nikos Paragios; Nikos Komodakis; Michael Sass Hansen; Nassir Navab
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

7.  Alteration of human fetal subplate layer and intermediate zone during normal development on MR and diffusion tensor imaging.

Authors:  E Widjaja; S Geibprasert; S Z Mahmoodabadi; S Blaser; N E Brown; P Shannon
Journal:  AJNR Am J Neuroradiol       Date:  2010-01-14       Impact factor: 3.825

8.  Brain volume and metabolism in fetuses with congenital heart disease: evaluation with quantitative magnetic resonance imaging and spectroscopy.

Authors:  Catherine Limperopoulos; Wayne Tworetzky; Doff B McElhinney; Jane W Newburger; David W Brown; Richard L Robertson; Nicolas Guizard; Ellen McGrath; Judith Geva; David Annese; Carolyn Dunbar-Masterson; Bethany Trainor; Peter C Laussen; Adré J du Plessis
Journal:  Circulation       Date:  2009-12-21       Impact factor: 29.690

9.  Microstructural development of human brain assessed in utero by diffusion tensor imaging.

Authors:  Tony Bui; Jean-Luc Daire; François Chalard; Isabelle Zaccaria; Corinne Alberti; Monique Elmaleh; Catherine Garel; Dominique Luton; Nathalie Blanc; Guy Sebag
Journal:  Pediatr Radiol       Date:  2006-09-08

10.  The intrinsic geometry of the cerebral cortex.

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Journal:  J Theor Biol       Date:  1994-02-07       Impact factor: 2.691

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  40 in total

1.  Mapping directionality specific volume changes using tensor based morphometry: an application to the study of gyrogenesis and lateralization of the human fetal brain.

Authors:  Vidya Rajagopalan; Julia Scott; Piotr A Habas; Kio Kim; Francois Rousseau; Orit A Glenn; A James Barkovich; Colin Studholme
Journal:  Neuroimage       Date:  2012-04-06       Impact factor: 6.556

Review 2.  Using diffusion anisotropy to study cerebral cortical gray matter development.

Authors:  Christopher D Kroenke
Journal:  J Magn Reson       Date:  2018-04-26       Impact factor: 2.229

3.  Spatiotemporal alignment of in utero BOLD-MRI series.

Authors:  Esra Abaci Turk; Jie Luo; Borjan Gagoski; Javier Pascau; Carolina Bibbo; Julian N Robinson; P Ellen Grant; Elfar Adalsteinsson; Polina Golland; Norberto Malpica
Journal:  J Magn Reson Imaging       Date:  2017-02-02       Impact factor: 4.813

Review 4.  Studying neuroanatomy using MRI.

Authors:  Jason P Lerch; André J W van der Kouwe; Armin Raznahan; Tomáš Paus; Heidi Johansen-Berg; Karla L Miller; Stephen M Smith; Bruce Fischl; Stamatios N Sotiropoulos
Journal:  Nat Neurosci       Date:  2017-02-23       Impact factor: 24.884

Review 5.  Toward the automatic quantification of in utero brain development in 3D structural MRI: A review.

Authors:  Oualid M Benkarim; Gerard Sanroma; Veronika A Zimmer; Emma Muñoz-Moreno; Nadine Hahner; Elisenda Eixarch; Oscar Camara; Miguel Angel González Ballester; Gemma Piella
Journal:  Hum Brain Mapp       Date:  2017-02-14       Impact factor: 5.038

6.  Folding, But Not Surface Area Expansion, Is Associated with Cellular Morphological Maturation in the Fetal Cerebral Cortex.

Authors:  Xiaojie Wang; Colin Studholme; Peta L Grigsby; Antonio E Frias; Verginia C Cuzon Carlson; Christopher D Kroenke
Journal:  J Neurosci       Date:  2017-01-09       Impact factor: 6.167

Review 7.  Mapping the developing human brain in utero using quantitative MR imaging techniques.

Authors:  Colin Studholme
Journal:  Semin Perinatol       Date:  2015-03       Impact factor: 3.300

8.  A discriminative feature selection approach for shape analysis: Application to fetal brain cortical folding.

Authors:  J Pontabry; F Rousseau; C Studholme; M Koob; J-L Dietemann
Journal:  Med Image Anal       Date:  2016-07-25       Impact factor: 8.545

9.  BTK: an open-source toolkit for fetal brain MR image processing.

Authors:  François Rousseau; Estanislao Oubel; Julien Pontabry; Marc Schweitzer; Colin Studholme; Mériam Koob; Jean-Louis Dietemann
Journal:  Comput Methods Programs Biomed       Date:  2012-10-01       Impact factor: 5.428

10.  Construction of a deformable spatiotemporal MRI atlas of the fetal brain: evaluation of similarity metrics and deformation models.

Authors:  Ali Gholipour; Catherine Limperopoulos; Sean Clancy; Cedric Clouchoux; Alireza Akhondi-Asl; Judy A Estroff; Simon K Warfield
Journal:  Med Image Comput Comput Assist Interv       Date:  2014
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