Literature DB >> 21567873

Conscript: RasMol to PyMOL script converter.

Scott E Mottarella1, Mario Rosa, Abdul Bangura, Herbert J Bernstein, Paul A Craig.   

Abstract

The aim of the Structural Biology Extensible Visualization Scripting Language (SBEVSL) project is to allow users who are experts in one scripting language to use that language in a second molecular visualization environment without requiring the user to learn a new scripting language. ConSCRIPT, the first SBEVSL release, is a plug-in for PyMOL that accepts RasMol scripting commands either as premade scripts or as line-by-line entries from PyMOL's own command line. The plug-in is available for download at http://sourceforge.net/projects/sbevsl/files in the ConSCRIPT folder. Biochemistry and Molecular Biology Education Vol. 38, No. 6, pp. 419-422, 2010.
Copyright © 2010 International Union of Biochemistry and Molecular Biology, Inc.

Entities:  

Year:  2010        PMID: 21567873      PMCID: PMC3134254          DOI: 10.1002/bmb.20450

Source DB:  PubMed          Journal:  Biochem Mol Biol Educ        ISSN: 1470-8175            Impact factor:   1.160


  5 in total

1.  Recent changes to RasMol, recombining the variants.

Authors:  H J Bernstein
Journal:  Trends Biochem Sci       Date:  2000-09       Impact factor: 13.807

2.  Efficient molecular surface rendering by linear-time pseudo-Gaussian approximation to Lee-Richards surfaces (PGALRS).

Authors:  Herbert J Bernstein; Paul A Craig
Journal:  J Appl Crystallogr       Date:  2010-02-12       Impact factor: 3.304

3.  Biomolecules in the computer: Jmol to the rescue.

Authors:  Angel Herráez
Journal:  Biochem Mol Biol Educ       Date:  2006-07       Impact factor: 1.160

4.  RASMOL: biomolecular graphics for all.

Authors:  R A Sayle; E J Milner-White
Journal:  Trends Biochem Sci       Date:  1995-09       Impact factor: 13.807

5.  Reaction of porcine pancreatic elastase with 7-substituted 3-alkoxy-4-chloroisocoumarins: design of potent inhibitors using the crystal structure of the complex formed with 4-chloro-3-ethoxy-7-guanidinoisocoumarin.

Authors:  J C Powers; J Oleksyszyn; S L Narasimhan; C M Kam
Journal:  Biochemistry       Date:  1990-03-27       Impact factor: 3.162

  5 in total
  3 in total

1.  PDB@: an offline toolkit for exploration and analysis of PDB files.

Authors:  Udayakumar Mani; Sadhana Ravisankar; Sai Mukund Ramakrishnan
Journal:  J Struct Funct Genomics       Date:  2013-08-28

2.  Pseudomonas aeruginosa phage PaP1 DNA polymerase is an A-family DNA polymerase demonstrating ssDNA and dsDNA 3'-5' exonuclease activity.

Authors:  Binyan Liu; Shiling Gu; Nengsong Liang; Mei Xiong; Qizhen Xue; Shuguang Lu; Fuquan Hu; Huidong Zhang
Journal:  Virus Genes       Date:  2016-04-06       Impact factor: 2.332

3.  The yeast prefoldin-like URI-orthologue Bud27 associates with the RSC nucleosome remodeler and modulates transcription.

Authors:  María Carmen Mirón-García; Ana Isabel Garrido-Godino; Verónica Martínez-Fernández; Antonio Fernández-Pevida; Abel Cuevas-Bermúdez; Manuel Martín-Expósito; Sebastián Chávez; Jesús de la Cruz; Francisco Navarro
Journal:  Nucleic Acids Res       Date:  2014-07-31       Impact factor: 16.971

  3 in total

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