Literature DB >> 21565046

Assessing morphological and DNA-based diet analysis techniques in a generalist predator, the arrow squid Nototodarus gouldi.

Michelle Braley1, Simon D Goldsworthy, Brad Page, Mike Steer, Jeremy J Austin.   

Abstract

Establishing the diets of marine generalist consumers is difficult, with most studies limited to the use of morphological methods for prey identification. Such analyses rely on the preservation of diagnostic hard parts, which can limit taxonomic resolution and introduce biases. DNA-based analyses provide a method to assess the diets of marine species, potentially overcoming many of the limitations introduced by other techniques. This study compared the effectiveness of morphological and DNA-based analysis for determining the diet of a free-ranging generalist predator, the arrow squid (Nototodarus gouldi). A combined approach was more effective than using either of the methods in isolation. Nineteen unique prey taxa were identified, of which six were found by both methods, 10 were only detected using DNA and three were only identified using morphological methods. Morphological techniques only found 50% of the total number of identifiable prey taxa, whereas DNA-based techniques found 84%. This study highlights the benefits of using a combination of techniques to detect and identify prey of generalist marine consumers.
© 2009 Blackwell Publishing Ltd.

Entities:  

Year:  2009        PMID: 21565046     DOI: 10.1111/j.1755-0998.2009.02767.x

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN: 1755-098X            Impact factor:   7.090


  10 in total

1.  Pyrosequencing of prey DNA in faeces of carnivorous land snails to facilitate ecological restoration and relocation programmes.

Authors:  Benjamin R Waterhouse; Stéphane Boyer; Steve D Wratten
Journal:  Oecologia       Date:  2014-03-26       Impact factor: 3.225

2.  From puffins to plankton: a DNA-based analysis of a seabird food chain in the northern Gulf of Maine.

Authors:  A Kirsten Bowser; Antony W Diamond; Jason A Addison
Journal:  PLoS One       Date:  2013-12-16       Impact factor: 3.240

3.  Maximizing dietary information retrievable from carcasses of Great Cormorants Phalacrocorax carbo using a combined morphological and molecular analytical approach.

Authors:  Johannes Oehm; Bettina Thalinger; Hannes Mayr; Michael Traugott
Journal:  Ibis (Lond 1859)       Date:  2015-12-15       Impact factor: 2.517

4.  Seeing is believing? Comparing plant-herbivore networks constructed by field co-occurrence and DNA barcoding methods for gaining insights into network structures.

Authors:  Chunchao Zhu; Dominique Gravel; Fangliang He
Journal:  Ecol Evol       Date:  2019-02-07       Impact factor: 2.912

5.  Feeding intensity and molecular prey identification of the common long-armed octopus, Octopus minor (Mollusca: Octopodidae) in the wild.

Authors:  Qi-Kang Bo; Xiao-Dong Zheng; Zhi-Wei Chen
Journal:  PLoS One       Date:  2020-01-27       Impact factor: 3.240

Review 6.  Fish as predators and prey: DNA-based assessment of their role in food webs.

Authors:  Michael Traugott; Bettina Thalinger; Corinna Wallinger; Daniela Sint
Journal:  J Fish Biol       Date:  2020-07-08       Impact factor: 2.051

7.  Effectiveness of annealing blocking primers versus restriction enzymes for characterization of generalist diets: unexpected prey revealed in the gut contents of two coral reef fish species.

Authors:  Matthieu Leray; Natalia Agudelo; Suzanne C Mills; Christopher P Meyer
Journal:  PLoS One       Date:  2013-04-08       Impact factor: 3.240

Review 8.  Cephalopods as Predators: A Short Journey among Behavioral Flexibilities, Adaptions, and Feeding Habits.

Authors:  Roger Villanueva; Valentina Perricone; Graziano Fiorito
Journal:  Front Physiol       Date:  2017-08-17       Impact factor: 4.566

9.  Behavioral and trophic segregations help the Tahiti petrel to cope with the abundance of wedge-tailed shearwater when foraging in oligotrophic tropical waters.

Authors:  Andreas Ravache; Karen Bourgeois; Henri Weimerskirch; Angélique Pagenaud; Sophie de Grissac; Mark Miller; Sylvain Dromzée; Anne Lorrain; Valérie Allain; Paco Bustamante; Jonas Bylemans; Dianne Gleeson; Yves Letourneur; Éric Vidal
Journal:  Sci Rep       Date:  2020-09-15       Impact factor: 4.379

Review 10.  Advances and Limitations of Next Generation Sequencing in Animal Diet Analysis.

Authors:  Gang Liu; Shumiao Zhang; Xinsheng Zhao; Chao Li; Minghao Gong
Journal:  Genes (Basel)       Date:  2021-11-23       Impact factor: 4.096

  10 in total

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