Literature DB >> 21564625

Development of tetranucleotide microsatellite markers for the cushion star, Asterina gibbosa, and cross-species amplification.

I Acevedo1, P Bloor, P Cabezas, C Toledo, M Calvo, A Machordom.   

Abstract

We describe nine polymorphic tetranucleotide microsatellite loci from the starfish, Asterina gibbosa. Loci were isolated from a partial genomic library that had been enriched for AAAC repeat sequences. Number of alleles per locus ranged from two to 14 in a sample of 85 individuals from three populations (two from Spain and one from the UK). Observed and expected heterozygosities per population ranged from 0.000 to 0.400 and from 0.040 to 0.784, respectively. All loci presented significant heterozygote deficits in one or more populations. Eight of these loci were amplified and variable in A. pancerii and A. phylactica. These loci will be used to study population structure in A. gibbosa.
© 2008 The Authors. Journal compilation © 2008 Blackwell Publishing Ltd.

Entities:  

Year:  2008        PMID: 21564625     DOI: 10.1111/j.1755-0998.2008.02267.x

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN: 1755-098X            Impact factor:   7.090


  2 in total

1.  Isolation of microsatellite loci for the endangered vermetid gastropod Dendropoma lebeche using Illumina MiSeq next generation sequencing technology.

Authors:  Violeta López-Márquez; Ricardo García-Jiménez; Marta Calvo; José Templado; Annie Machordom
Journal:  Mol Biol Rep       Date:  2018-09-05       Impact factor: 2.316

2.  Development and characterization of 26 novel microsatellite loci for the trochid gastropod Gibbula divaricata (Linnaeus, 1758), using Illumina MiSeq next generation sequencing technology.

Authors:  Violeta López-Márquez; Ricardo García-Jiménez; José Templado; Annie Machordom
Journal:  PeerJ       Date:  2016-03-24       Impact factor: 2.984

  2 in total

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