Literature DB >> 21564579

Development of 14 minisatellite markers for the citrus canker bacterium, Xanthomonas citri pv. citri.

L Bui Thi Ngoc1, C Verniere, K Vital, F Guerin, L Gagnevin, S Brisse, N Ah-You, O Pruvost.   

Abstract

We screened the genome of Xanthomonas citri pv. citri strain 306 for tandem repeats. A multiplex polymerase chain reaction protocol was used to assess the genetic diversity of 239 strains of X. citri pv. citri from Asia. The total number of alleles per locus ranged from three to 20. Using pooled data sets, 223 different haplotypes were identified. Successful amplifications were obtained at most loci for seven other X. citri pathovars. This typing scheme is expected to be useful at different spatial scales for population studies of pathovars of X. citri, several of which cause plant diseases of economic importance.
© 2008 The Authors. Journal compilation © 2008 Blackwell Publishing Ltd.

Entities:  

Year:  2008        PMID： 21564579     DOI： 10.1111/j.1755-0998.2008.02242.x

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN： 1755-098X            Impact factor:   7.090


  12 in total

1.  New multilocus variable-number tandem-repeat analysis tool for surveillance and local epidemiology of bacterial leaf blight and bacterial leaf streak of rice caused by Xanthomonas oryzae.

Authors:  L Poulin; P Grygiel; M Magne; L Gagnevin; L M Rodriguez-R; N Forero Serna; S Zhao; M El Rafii; S Dao; C Tekete; I Wonni; O Koita; O Pruvost; V Verdier; C Vernière; R Koebnik
Journal:  Appl Environ Microbiol       Date:  2014-11-14       Impact factor: 4.792

2.  New Multilocus Variable-Number Tandem-Repeat Analysis (MLVA) Scheme for Fine-Scale Monitoring and Microevolution-Related Study of Ralstonia pseudosolanacearum Phylotype I Populations.

Authors:  Jérémy Guinard; Anne Latreille; Fabien Guérin; Stéphane Poussier; Emmanuel Wicker
Journal:  Appl Environ Microbiol       Date:  2017-02-15       Impact factor: 4.792

3.  From local surveys to global surveillance: three high-throughput genotyping methods for epidemiological monitoring of Xanthomonas citri pv. citri pathotypes.

Authors:  Thi Ngoc Lan Bui; Christian Vernière; Philippe Jarne; Sylvain Brisse; Fabien Guérin; Sébastien Boutry; Lionel Gagnevin; Olivier Pruvost
Journal:  Appl Environ Microbiol       Date:  2008-12-16       Impact factor: 4.792

4.  Draft Genome Sequences of Two Xanthomonas euvesicatoria Strains from the Balkan Peninsula.

Authors:  Taca Vancheva; Pierre Lefeuvre; Nevena Bogatzevska; Penka Moncheva; Ralf Koebnik
Journal:  Genome Announc       Date:  2015-02-05

5.  A new Multi Locus Variable Number of Tandem Repeat Analysis Scheme for epidemiological surveillance of Xanthomonas vasicola pv. musacearum, the plant pathogen causing bacterial wilt on banana and enset.

Authors:  Gloria Valentine Nakato; Juan Luis Fuentes Rojas; Christian Verniere; Laurence Blondin; Teresa Coutinho; George Mahuku; Emmanuel Wicker
Journal:  PLoS One       Date:  2019-04-11       Impact factor: 3.240

6.  Xanthomonas citri pv. viticola Affecting Grapevine in Brazil: Emergence of a Successful Monomorphic Pathogen.

Authors:  Marisa A S V Ferreira; Sophie Bonneau; Martial Briand; Sophie Cesbron; Perrine Portier; Armelle Darrasse; Marco A S Gama; Maria Angélica G Barbosa; Rosa de L R Mariano; Elineide B Souza; Marie-Agnès Jacques
Journal:  Front Plant Sci       Date:  2019-04-18       Impact factor: 5.753

7.  A MLVA genotyping scheme for global surveillance of the citrus pathogen Xanthomonas citri pv. citri suggests a worldwide geographical expansion of a single genetic lineage.

Authors:  Olivier Pruvost; Maxime Magne; Karine Boyer; Alice Leduc; Christophe Tourterel; Christine Drevet; Virginie Ravigné; Lionel Gagnevin; Fabien Guérin; Frédéric Chiroleu; Ralf Koebnik; Valérie Verdier; Christian Vernière
Journal:  PLoS One       Date:  2014-06-04       Impact factor: 3.240

8.  Genomic survey of pathogenicity determinants and VNTR markers in the cassava bacterial pathogen Xanthomonas axonopodis pv. Manihotis strain CIO151.

Authors:  Mario L Arrieta-Ortiz; Luis M Rodríguez-R; Álvaro L Pérez-Quintero; Lucie Poulin; Ana C Díaz; Nathalia Arias Rojas; Cesar Trujillo; Mariana Restrepo Benavides; Rebecca Bart; Jens Boch; Tristan Boureau; Armelle Darrasse; Perrine David; Thomas Dugé de Bernonville; Paula Fontanilla; Lionel Gagnevin; Fabien Guérin; Marie-Agnès Jacques; Emmanuelle Lauber; Pierre Lefeuvre; Cesar Medina; Edgar Medina; Nathaly Montenegro; Alejandra Muñoz Bodnar; Laurent D Noël; Juan F Ortiz Quiñones; Daniela Osorio; Carolina Pardo; Prabhu B Patil; Stéphane Poussier; Olivier Pruvost; Isabelle Robène-Soustrade; Robert P Ryan; Javier Tabima; Oscar G Urrego Morales; Christian Vernière; Sébastien Carrere; Valérie Verdier; Boris Szurek; Silvia Restrepo; Camilo López; Ralf Koebnik; Adriana Bernal
Journal:  PLoS One       Date:  2013-11-22       Impact factor: 3.240

9.  Population typing of the causal agent of cassava bacterial blight in the Eastern Plains of Colombia using two types of molecular markers.

Authors:  César A Trujillo; Nathalia Arias-Rojas; Lucie Poulin; César A Medina; Anibal Tapiero; Silvia Restrepo; Ralf Koebnik; Adriana J Bernal
Journal:  BMC Microbiol       Date:  2014-06-19       Impact factor: 3.605

10.  Molecular Epidemiology of Xanthomonas euvesicatoria Strains from the Balkan Peninsula Revealed by a New Multiple-Locus Variable-Number Tandem-Repeat Analysis Scheme.

Authors:  Taca Vancheva; Nevena Bogatzevska; Penka Moncheva; Sasa Mitrev; Christian Vernière; Ralf Koebnik
Journal:  Microorganisms       Date:  2021-03-05
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.