Literature DB >> 21564574

GeneticStudio: a suite of programs for spatial analysis of genetic-marker data.

Rodney J Dyer1.   

Abstract

The analysis of genetic marker data is increasingly being conducted in the context of the spatial arrangement of strata (e.g. populations) necessitating a more flexible set of analysis tools. GeneticStudio consists of four interacting programs: (i) Geno a spreadsheet-like interface for the analysis of spatially explicit marker-based genetic variation; (ii) Graph software for the analysis of Population Graph and network topologies, (iii) Manteller, a general purpose for matrix analysis program; and (iv) SNPFinder, a program for identifying single nucleotide polymorphisms. The GeneticStudio suite is available as source code as well as binaries for OSX and Windows and is distributed under the GNU General Public License.
© 2009 The Authors. Journal compilation © 2009 Blackwell Publishing Ltd.

Entities:  

Year:  2009        PMID： 21564574     DOI： 10.1111/j.1755-0998.2008.02384.x

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN： 1755-098X            Impact factor:   7.090


  22 in total

1.  Spatial genetic structure of Aquilegia taxa endemic to the island of Sardinia.

Authors:  J L Garrido; G Fenu; E Mattana; G Bacchetta
Journal:  Ann Bot       Date:  2012-02-19       Impact factor: 4.357

2.  Genetic guidelines for the conservation of the endangered polyploid Centaurea borjae (Asteraceae).

Authors:  Lua Lopez; Rodolfo Barreiro
Journal:  J Plant Res       Date:  2012-06-08       Impact factor: 2.629

3.  Genetic variability and structure of jaguar (Panthera onca) in Mexican zoos.

Authors:  Pilar Rueda-Zozaya; Germán D Mendoza-Martínez; Daniel Martínez-Gómez; Octavio Monroy-Vilchis; José Antonio Godoy; Armando Sunny; Francisco Palomares; Cuauhtémoc Chávez; José Herrera-Haro
Journal:  Genetica       Date:  2016-01-20       Impact factor: 1.082

4.  The relative contribution of natural landscapes and human-mediated factors on the connectivity of a noxious invasive weed.

Authors:  Diego F Alvarado-Serrano; Megan L Van Etten; Shu-Mei Chang; Regina S Baucom
Journal:  Heredity (Edinb)       Date:  2018-07-02       Impact factor: 3.821

5.  Ascertaining gene flow patterns in livestock populations of developing countries: a case study in Burkina Faso goat.

Authors:  Amadou Traoré; Isabel Álvarez; Iván Fernández; Lucía Pérez-Pardal; Adama Kaboré; Gisèlle Ms Ouédraogo-Sanou; Yacouba Zaré; Hamidou H Tambourá; Félix Goyache
Journal:  BMC Genet       Date:  2012-05-07       Impact factor: 2.797

6.  Variations on a theme: diversification of cuticular hydrocarbons in a clade of cactophilic Drosophila.

Authors:  Cássia C de Oliveira; Maura H Manfrin; Fábio de M Sene; Larry L Jackson; William J Etges
Journal:  BMC Evol Biol       Date:  2011-06-23       Impact factor: 3.260

7.  Impact of human management on the genetic variation of wild pepper, Capsicum annuum var. glabriusculum.

Authors:  Pablo González-Jara; Alejandra Moreno-Letelier; Aurora Fraile; Daniel Piñero; Fernando García-Arenal
Journal:  PLoS One       Date:  2011-12-06       Impact factor: 3.240

8.  Applications of graph theory to landscape genetics.

Authors:  Colin J Garroway; Jeff Bowman; Denis Carr; Paul J Wilson
Journal:  Evol Appl       Date:  2008-09-25       Impact factor: 5.183

9.  On-farm dynamic management of genetic diversity: the impact of seed diffusions and seed saving practices on a population-variety of bread wheat.

Authors:  Mathieu Thomas; Elise Demeulenaere; Julie C Dawson; Abdul Rehman Khan; Nathalie Galic; Sophie Jouanne-Pin; Carine Remoue; Christophe Bonneuil; Isabelle Goldringer
Journal:  Evol Appl       Date:  2012-12       Impact factor: 5.183

10.  The sensitivity of genetic connectivity measures to unsampled and under-sampled sites.

Authors:  Erin L Koen; Jeff Bowman; Colin J Garroway; Paul J Wilson
Journal:  PLoS One       Date:  2013-02-08       Impact factor: 3.240
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.