Literature DB >> 21564564

An inexpensive high-throughput method to extract high yields of good quality DNA from fungi.

T Kikuchi1, N Karim, H Masuya, Y Ota, T Kubono.   

Abstract

We developed an efficient method for high-throughput extraction of high-quality DNA from various fungi. In this method, fungal mycelia were cultured and harvested on the surfaces of membranes on media plates. We degraded cell walls using a lytic enzyme (Yatalase). Purification was performed on 96-well glass fibre filter plates. DNA was successfully extracted from various fungi provided (102 genus 132 species) at high yields and quality, and proved suitable for storage, polymerase chain reaction amplification and restriction enzyme digestion. The method described is rapid, inexpensive and automation friendly. This enables the simultaneous extraction of large numbers of samples, significantly improving the potential throughput in genomics, particularly in diagnostic and population studies.
© 2008 The Authors. Journal compilation © 2008 Blackwell Publishing Ltd.

Entities:  

Year:  2008        PMID: 21564564     DOI: 10.1111/j.1755-0998.2008.02184.x

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN: 1755-098X            Impact factor:   7.090


  2 in total

1.  Symbiotic fungal flora in leaf galls induced by Illiciomyia yukawai (Diptera: Cecidomyiidae) and in its mycangia.

Authors:  Shun Kobune; Hisashi Kajimura; Hayato Masuya; Takanori Kubono
Journal:  Microb Ecol       Date:  2011-10-21       Impact factor: 4.552

2.  Distribution and evolution of glycoside hydrolase family 45 cellulases in nematodes and fungi.

Authors:  Juan E Palomares-Rius; Yuuri Hirooka; Isheng J Tsai; Hayato Masuya; Akina Hino; Natsumi Kanzaki; John T Jones; Taisei Kikuchi
Journal:  BMC Evol Biol       Date:  2014-04-01       Impact factor: 3.260

  2 in total

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