Literature DB >> 21562824

Signal mass and Ca²⁺ kinetics in local calcium events: a modeling study.

Irina Baran1, Constanta Ganea, Raluca Ungureanu, Ioana Teodora Tofolean.   

Abstract

We use a detailed modeling formalism based on numerical simulations of local calcium release events where the blurring of the image, the presence of diffusional barriers provided by large organelles situated close to the release site, as well as the variable position of the scan line with respect to the release site are taken into consideration. We have investigated the effect of the fluorescence noise fluctuations on the accuracy in computing the signal mass from linescan recordings and obtained a quantitative description of both the signal mass and the local increase in the free Ca(2+) level as a function of the release current, the release duration and the orientation of the scan line, for three different levels of noise magnitudes. The model could provide a very good fit to a wide set of available experimental data regarding the signal mass of puffs visualized by fluorescence microscopy in the Xenopus oocyte loaded with 40 μM Oregon Green-1 in the absence of the calcium chelator EGTA. Numerical simulations also predict the amplitude and the kinetics of calcium signals evolving in the absence of the indicator, and indicate that sub-maximal activation of IP(3) receptors could produce in average levels of about 2 μM and 0.4 μM free Ca(2+) close to a release site located in the animal or in the vegetal hemisphere, respectively, whereas the maximal levels reached in more rare events could be 11 μM and 4 μM, respectively.

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Year:  2011        PMID: 21562824     DOI: 10.1007/s00894-011-1104-6

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  43 in total

Review 1.  Structural organization of the endoplasmic reticulum.

Authors:  Gia K Voeltz; Melissa M Rolls; Tom A Rapoport
Journal:  EMBO Rep       Date:  2002-10       Impact factor: 8.807

2.  The number and spatial distribution of IP3 receptors underlying calcium puffs in Xenopus oocytes.

Authors:  Jianwei Shuai; Heather J Rose; Ian Parker
Journal:  Biophys J       Date:  2006-09-15       Impact factor: 4.033

3.  Calcium--a life and death signal.

Authors:  M J Berridge; M D Bootman; P Lipp
Journal:  Nature       Date:  1998-10-15       Impact factor: 49.962

4.  A simple numerical model of calcium spark formation and detection in cardiac myocytes.

Authors:  G D Smith; J E Keizer; M D Stern; W J Lederer; H Cheng
Journal:  Biophys J       Date:  1998-07       Impact factor: 4.033

5.  A continuum of InsP3-mediated elementary Ca2+ signalling events in Xenopus oocytes.

Authors:  X P Sun; N Callamaras; J S Marchant; I Parker
Journal:  J Physiol       Date:  1998-05-15       Impact factor: 5.182

6.  Calcium and cell cycle progression: possible effects of external perturbations on cell proliferation.

Authors:  I Baran
Journal:  Biophys J       Date:  1996-03       Impact factor: 4.033

7.  Hemispheric asymmetry of rapid chloride responses to inositol trisphosphate and calcium in Xenopus oocytes.

Authors:  M Lupu-Meiri; H Shapira; Y Oron
Journal:  FEBS Lett       Date:  1988-11-21       Impact factor: 4.124

8.  Optical single-channel recording by imaging Ca2+ flux through individual ion channels: theoretical considerations and limits to resolution.

Authors:  Jianwei Shuai; Ian Parker
Journal:  Cell Calcium       Date:  2005-04       Impact factor: 6.817

9.  Unitary Ca(2+) current through recombinant type 3 InsP(3) receptor channels under physiological ionic conditions.

Authors:  Horia Vais; J Kevin Foskett; Don-On Daniel Mak
Journal:  J Gen Physiol       Date:  2010-11-15       Impact factor: 4.086

10.  Membrane junctions in Xenopus eggs: their distribution suggests a role in calcium regulation.

Authors:  D M Gardiner; R D Grey
Journal:  J Cell Biol       Date:  1983-04       Impact factor: 10.539

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