Literature DB >> 2156133

Phylogenetic relationships from three-dimensional protein structures.

M S Johnson, A Sali, T L Blundell.   

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Year:  1990        PMID: 2156133     DOI: 10.1016/0076-6879(90)83044-a

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


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  18 in total

1.  PALI-a database of Phylogeny and ALIgnment of homologous protein structures.

Authors:  S Balaji; S Sujatha; S S Kumar; N Srinivasan
Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

2.  Divergent evolution within protein superfolds inferred from profile-based phylogenetics.

Authors:  Douglas L Theobald; Deborah S Wuttke
Journal:  J Mol Biol       Date:  2005-09-20       Impact factor: 5.469

3.  Structure-based phylogeny of the metallo-beta-lactamases.

Authors:  Gianpiero Garau; Anne Marie Di Guilmi; Barry G Hall
Journal:  Antimicrob Agents Chemother       Date:  2005-07       Impact factor: 5.191

4.  Comparison of sequence-based and structure-based phylogenetic trees of homologous proteins: Inferences on protein evolution.

Authors:  S Balaji; N Srinivasan
Journal:  J Biosci       Date:  2007-01       Impact factor: 1.826

5.  A fast unbiased comparison of protein structures by means of the Needleman-Wunsch algorithm.

Authors:  J Rose; F Eisenmenger
Journal:  J Mol Evol       Date:  1991-04       Impact factor: 2.395

6.  Structural comparison of cupredoxin domains: domain recycling to construct proteins with novel functions.

Authors:  M E Murphy; P F Lindley; E T Adman
Journal:  Protein Sci       Date:  1997-04       Impact factor: 6.725

7.  Simultaneous Bayesian estimation of alignment and phylogeny under a joint model of protein sequence and structure.

Authors:  Joseph L Herman; Christopher J Challis; Ádám Novák; Jotun Hein; Scott C Schmidler
Journal:  Mol Biol Evol       Date:  2014-06-04       Impact factor: 16.240

8.  Phyletic relationships of protein structures based on spatial preference of residues.

Authors:  C X Qu; L H Lai; X J Xu; Y Q Tang
Journal:  J Mol Evol       Date:  1993-01       Impact factor: 2.395

9.  Alignment of 700 globin sequences: extent of amino acid substitution and its correlation with variation in volume.

Authors:  O H Kapp; L Moens; J Vanfleteren; C N Trotman; T Suzuki; S N Vinogradov
Journal:  Protein Sci       Date:  1995-10       Impact factor: 6.725

10.  Solution structure and phylogenetics of Prod1, a member of the three-finger protein superfamily implicated in salamander limb regeneration.

Authors:  Acely Garza-Garcia; Richard Harris; Diego Esposito; Phillip B Gates; Paul C Driscoll
Journal:  PLoS One       Date:  2009-09-22       Impact factor: 3.240

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