Literature DB >> 2155113

Residual motion of hemoglobin-bound spin labels and protein dynamics: viscosity dependence of the rotational correlation times.

H J Steinhoff1.   

Abstract

The residual motion of spin labels bound to cysteine beta 93 and to lysines of methemoglobin has been studied by electron paramagnetic resonance spectroscopy. To separate the influences of the solvent and the protein environment of the label fluctuations, the correlation times, tau, were analyzed as a function of temperature for fixed solvent viscosities, eta. Results show that over a wide range of viscosity the dependence of tau on eta may be empirically described by a power law tau approximately eta kappa. The exponent kappa depends strongly on the location of the label on the protein surface. If one regards the spin labels as artificial amino acid side chains, characteristic values of correlation times and amplitudes of the rotational motion at the surface can be given. For eta = 1 cP and T = 297 K the correlation time of the labels bound to lysines is found to be tau = 9.10(-10) S and the rotational diffusion is nearly isotropic. The spin label bound to cysteine beta 93 occupies a protein pocket, its rotational motion is therefore restricted. The correlation time of the label motion within a limited motion cone of semi angle theta = 30 degrees +/- 3 degrees is found to be tau = 1.3.10(-9) S for eta = 1 cP and T = 297 K.

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Year:  1990        PMID: 2155113     DOI: 10.1007/BF00185420

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  12 in total

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Authors:  J C Chien
Journal:  J Mol Biol       Date:  1979-09-25       Impact factor: 5.469

Review 2.  Enzyme dynamics: the statistical physics approach.

Authors:  G Careri; P Fasella; E Gratton
Journal:  Annu Rev Biophys Bioeng       Date:  1979

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Authors:  H Frauenfelder; G A Petsko; D Tsernoglou
Journal:  Nature       Date:  1979-08-16       Impact factor: 49.962

4.  Spin-label-induced nuclear relaxation. Distances between bound saccharides, histidine-15, and tryptophan-123 on lysozyme in solution.

Authors:  R W Wien; J D Morrisett; H M McConnell
Journal:  Biochemistry       Date:  1972-09-26       Impact factor: 3.162

Review 5.  Motions in proteins.

Authors:  F R Gurd; T M Rothgeb
Journal:  Adv Protein Chem       Date:  1979

6.  Affinity labeling of the polyphosphate binding site of hemoglobin.

Authors:  R E Benesch; R Benesch; R D Renthal; N Maeda
Journal:  Biochemistry       Date:  1972-09-12       Impact factor: 3.162

7.  A simple method for determination of rotational correlation times and separation of rotational and polarity effects from EPR spectra of spin-labeled biomolecules in a wide correlation time range.

Authors:  H J Steinhoff
Journal:  J Biochem Biophys Methods       Date:  1988-12

8.  Apparent hydrogen bonding by strongly immobilized spin-labels.

Authors:  M E Johnson
Journal:  Biochemistry       Date:  1981-06-09       Impact factor: 3.162

9.  Viscosity scaling and protein dynamics.

Authors:  W Doster
Journal:  Biophys Chem       Date:  1983-03       Impact factor: 2.352

10.  Solvent viscosity and protein dynamics.

Authors:  D Beece; L Eisenstein; H Frauenfelder; D Good; M C Marden; L Reinisch; A H Reynolds; L B Sorensen; K T Yue
Journal:  Biochemistry       Date:  1980-11-11       Impact factor: 3.162

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  5 in total

1.  Calculation of electron paramagnetic resonance spectra from Brownian dynamics trajectories: application to nitroxide side chains in proteins.

Authors:  H J Steinhoff; W L Hubbell
Journal:  Biophys J       Date:  1996-10       Impact factor: 4.033

2.  Two dimensional diffusion of small molecules on protein surfaces: an EPR study of the restricted translational diffusion of protein-bound spin labels.

Authors:  O Dombrowsky; C Karin; C Schneiderhahn
Journal:  Eur Biophys J       Date:  1991       Impact factor: 1.733

3.  Rotational and translational water diffusion in the hemoglobin hydration shell: dielectric and proton nuclear relaxation measurements.

Authors:  H J Steinhoff; B Kramm; G Hess; C Owerdieck; A Redhardt
Journal:  Biophys J       Date:  1993-10       Impact factor: 4.033

4.  Electron-electron spin-spin interaction in spin-labeled low-spin methemoglobin.

Authors:  V Budker; J L Du; M Seiter; G R Eaton; S S Eaton
Journal:  Biophys J       Date:  1995-06       Impact factor: 4.033

5.  Glycerol effects on protein flexibility: a tryptophan phosphorescence study.

Authors:  M Gonnelli; G B Strambini
Journal:  Biophys J       Date:  1993-07       Impact factor: 4.033

  5 in total

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