Literature DB >> 21550682

Evolutionary genetics of plant adaptation.

Jill T Anderson1, John H Willis, Thomas Mitchell-Olds.   

Abstract

Plants provide unique opportunities to study the mechanistic basis and evolutionary processes of adaptation to diverse environmental conditions. Complementary laboratory and field experiments are important for testing hypotheses reflecting long-term ecological and evolutionary history. For example, these approaches can infer whether local adaptation results from genetic tradeoffs (antagonistic pleiotropy), where native alleles are best adapted to local conditions, or if local adaptation is caused by conditional neutrality at many loci, where alleles show fitness differences in one environment, but not in a contrasting environment. Ecological genetics in natural populations of perennial or outcrossing plants can also differ substantially from model systems. In this review of the evolutionary genetics of plant adaptation, we emphasize the importance of field studies for understanding the evolutionary dynamics of model and nonmodel systems, highlight a key life history trait (flowering time) and discuss emerging conservation issues.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21550682      PMCID: PMC3123387          DOI: 10.1016/j.tig.2011.04.001

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  87 in total

1.  QTL x environment interactions in rice. I. heading date and plant height.

Authors:  Z K Li; S B Yu; H R Lafitte; N Huang; B Courtois; S Hittalmani; C H M Vijayakumar; G F Liu; G C Wang; H E Shashidhar; J Y Zhuang; K L Zheng; V P Singh; J S Sidhu; S Srivantaneeyakul; G S Khush
Journal:  Theor Appl Genet       Date:  2003-09-05       Impact factor: 5.699

2.  Characterizing selection on phenotypic plasticity in response to natural environmental heterogeneity.

Authors:  Brooke S Baythavong; Maureen L Stanton
Journal:  Evolution       Date:  2010-08-19       Impact factor: 3.694

3.  Exploring genetic and expression differences between physiologically extreme ecotypes: comparative genomic hybridization and gene expression studies of Kas-1 and Tsu-1 accessions of Arabidopsis thaliana.

Authors:  Thomas E Juenger; Saunak Sen; Elizabeth Bray; Eli Stahl; Tierney Wayne; John McKay; James H Richards
Journal:  Plant Cell Environ       Date:  2010-03-18       Impact factor: 7.228

4.  Using environmental correlations to identify loci underlying local adaptation.

Authors:  Graham Coop; David Witonsky; Anna Di Rienzo; Jonathan K Pritchard
Journal:  Genetics       Date:  2010-06-01       Impact factor: 4.562

Review 5.  Combining population genomics and quantitative genetics: finding the genes underlying ecologically important traits.

Authors:  J R Stinchcombe; H E Hoekstra
Journal:  Heredity (Edinb)       Date:  2007-02-21       Impact factor: 3.821

6.  The role of recently derived FT paralogs in sunflower domestication.

Authors:  Benjamin K Blackman; Jared L Strasburg; Andrew R Raduski; Scott D Michaels; Loren H Rieseberg
Journal:  Curr Biol       Date:  2010-03-18       Impact factor: 10.834

7.  FLOWERING LOCUS T protein may act as the long-distance florigenic signal in the cucurbits.

Authors:  Ming-Kuem Lin; Helene Belanger; Young-Jin Lee; Erika Varkonyi-Gasic; Ken-Ichiro Taoka; Eriko Miura; Beatriz Xoconostle-Cázares; Karla Gendler; Richard A Jorgensen; Brett Phinney; Tony J Lough; William J Lucas
Journal:  Plant Cell       Date:  2007-05-31       Impact factor: 11.277

8.  Allelic variation in the perennial ryegrass FLOWERING LOCUS T gene is associated with changes in flowering time across a range of populations.

Authors:  Leif Skøt; Ruth Sanderson; Ann Thomas; Kirsten Skøt; Danny Thorogood; Galina Latypova; Torben Asp; Ian Armstead
Journal:  Plant Physiol       Date:  2010-11-29       Impact factor: 8.340

9.  Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines.

Authors:  Susanna Atwell; Yu S Huang; Bjarni J Vilhjálmsson; Glenda Willems; Matthew Horton; Yan Li; Dazhe Meng; Alexander Platt; Aaron M Tarone; Tina T Hu; Rong Jiang; N Wayan Muliyati; Xu Zhang; Muhammad Ali Amer; Ivan Baxter; Benjamin Brachi; Joanne Chory; Caroline Dean; Marilyne Debieu; Juliette de Meaux; Joseph R Ecker; Nathalie Faure; Joel M Kniskern; Jonathan D G Jones; Todd Michael; Adnane Nemri; Fabrice Roux; David E Salt; Chunlao Tang; Marco Todesco; M Brian Traw; Detlef Weigel; Paul Marjoram; Justin O Borevitz; Joy Bergelson; Magnus Nordborg
Journal:  Nature       Date:  2010-03-24       Impact factor: 49.962

10.  The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation.

Authors:  Jonathan K Pritchard; Joseph K Pickrell; Graham Coop
Journal:  Curr Biol       Date:  2010-02-23       Impact factor: 10.834

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  74 in total

1.  Lower plasticity exhibited by high- versus mid-elevation species in their phenological responses to manipulated temperature and drought.

Authors:  Simona Gugger; Halil Kesselring; Jürg Stöcklin; Elena Hamann
Journal:  Ann Bot       Date:  2015-09-30       Impact factor: 4.357

2.  Comparative genomics analysis reveals gene family expansion and changes of expression patterns associated with natural adaptations of flowering time and secondary metabolism in yellow Camellia.

Authors:  Xinlei Li; Zhengqi Fan; Haobo Guo; Ning Ye; Tao Lyu; Wen Yang; Jie Wang; Jia-Tong Wang; Bin Wu; Jiyuan Li; Hengfu Yin
Journal:  Funct Integr Genomics       Date:  2018-06-12       Impact factor: 3.410

Review 3.  Sex differences in local adaptation: what can we learn from reciprocal transplant experiments?

Authors:  Erik I Svensson; Debora Goedert; Miguel A Gómez-Llano; Foteini Spagopoulou; Angela Nava-Bolaños; Isobel Booksmythe
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-10-05       Impact factor: 6.237

4.  Genetic trade-offs and conditional neutrality contribute to local adaptation.

Authors:  Jill T Anderson; Cheng-Ruei Lee; Catherine A Rushworth; Robert I Colautti; Thomas Mitchell-Olds
Journal:  Mol Ecol       Date:  2012-03-15       Impact factor: 6.185

5.  Salinity Is an Agent of Divergent Selection Driving Local Adaptation of Arabidopsis to Coastal Habitats.

Authors:  Silvia Busoms; Joana Teres; Xin-Yuan Huang; Kirsten Bomblies; John Danku; Alex Douglas; Detlef Weigel; Charlotte Poschenrieder; David E Salt
Journal:  Plant Physiol       Date:  2015-06-01       Impact factor: 8.340

6.  Environmental adaptation contributes to gene polymorphism across the Arabidopsis thaliana genome.

Authors:  Cheng-Ruei Lee; Thomas Mitchell-Olds
Journal:  Mol Biol Evol       Date:  2012-07-13       Impact factor: 16.240

7.  3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture.

Authors:  Christopher N Topp; Anjali S Iyer-Pascuzzi; Jill T Anderson; Cheng-Ruei Lee; Paul R Zurek; Olga Symonova; Ying Zheng; Alexander Bucksch; Yuriy Mileyko; Taras Galkovskyi; Brad T Moore; John Harer; Herbert Edelsbrunner; Thomas Mitchell-Olds; Joshua S Weitz; Philip N Benfey
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-11       Impact factor: 11.205

8.  Contemporary and future studies in plant speciation, morphological/floral evolution and polyploidy: honouring the scientific contributions of Leslie D. Gottlieb to plant evolutionary biology.

Authors:  Daniel J Crawford; Jeffrey J Doyle; Douglas E Soltis; Pamela S Soltis; Jonathan F Wendel
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2014-08-05       Impact factor: 6.237

9.  Genetic mapping of adaptation reveals fitness tradeoffs in Arabidopsis thaliana.

Authors:  Jon Ågrena; Christopher G Oakley; John K McKay; John T Lovell; Douglas W Schemske
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-09       Impact factor: 11.205

Review 10.  Finding the Genomic Basis of Local Adaptation: Pitfalls, Practical Solutions, and Future Directions.

Authors:  Sean Hoban; Joanna L Kelley; Katie E Lotterhos; Michael F Antolin; Gideon Bradburd; David B Lowry; Mary L Poss; Laura K Reed; Andrew Storfer; Michael C Whitlock
Journal:  Am Nat       Date:  2016-08-15       Impact factor: 3.926

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