Literature DB >> 21542619

On the role of nonbonded interactions in vibrational energy relaxation of cyanide in water.

Myung Won Lee1, Markus Meuwly.   

Abstract

The vibrationally excited cyanide ion (CN(-)) in H2O or D2O relaxes back to the ground state within several tens of picoseconds. Pump-probe infrared spectroscopy has determined relaxation times of T1 = 28 ± 7 and 71 ± 3 ps in H2O and D2O, respectively. Atomistic simulations of this process using nonequilibrium molecular dynamics simulations allow determination of whether it is possible at all to describe such a process, what level of accuracy in the force fields is required, and whether the information can be used to understand the molecular mechanisms underlying vibrational relaxation. It is found that, by using the best electrostatic models investigated, absolute relaxation times can be described rather more qualitatively (T1(H2O) = 19 ps and T1(D2O) = 34 ps) whereas the relative change in going from water to deuterated water is more quantitatively captured (factor of 2 vs 2.5 from experiment). However, moderate adjustment of the van der Waals ranges by less than 20% (for NVT) and 7.5% (for NVE), respectively, leads to almost quantitative agreement with experiment. Analysis of the energy redistribution establishes that the major pathway for CN(-) relaxation in H2O or D2O proceeds through coupling to the water-bending plus libration mode.

Entities:  

Year:  2011        PMID: 21542619     DOI: 10.1021/jp202503m

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  4 in total

Review 1.  Quantitative molecular simulations.

Authors:  Kai Töpfer; Meenu Upadhyay; Markus Meuwly
Journal:  Phys Chem Chem Phys       Date:  2022-06-01       Impact factor: 3.945

2.  Quantifying the importance of protein conformation on ligand migration in myoglobin.

Authors:  Nuria Plattner; Markus Meuwly
Journal:  Biophys J       Date:  2012-01-18       Impact factor: 4.033

3.  Energy Redistribution Following CO2 Formation on Cold Amorphous Solid Water.

Authors:  Meenu Upadhyay; Markus Meuwly
Journal:  Front Chem       Date:  2022-02-08       Impact factor: 5.221

Review 4.  Ultrafast dynamics induced by the interaction of molecules with electromagnetic fields: Several quantum, semiclassical, and classical approaches.

Authors:  Sergey V Antipov; Swarnendu Bhattacharyya; Krystel El Hage; Zhen-Hao Xu; Markus Meuwly; Ursula Rothlisberger; Jiří Vaníček
Journal:  Struct Dyn       Date:  2018-01-08       Impact factor: 2.920

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.