Literature DB >> 21541381

Conditional reversible work method for molecular coarse graining applications.

Emiliano Brini1, Valentina Marcon, Nico F A van der Vegt.   

Abstract

Systematically coarse grained models for complex fluids usually lack chemical and thermodynamic transferability. Efforts to improve transferability require the development of effective potentials with unequivocal physical significance. In this paper, we introduce conditional reversible work (CRW) potentials that describe nonbonded interactions in coarse grained models at the pair level. The method used to obtain these potentials is straightforward to implement, can be readily extended to compute hydration contributions in implicit-solvent potentials, and is easy to automize. As a first illustration of the method, we present CRW potentials for 3-site models of hexane and toluene. The temperature-transferability of the liquid phase density obtained with these potentials has been investigated, and a comparison has been made with effective potentials obtained by the iterative Boltzmann inversion method. This journal is © the Owner Societies 2011

Entities:  

Year:  2011        PMID: 21541381     DOI: 10.1039/c0cp02888f

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  4 in total

1.  PRIMO: A Transferable Coarse-grained Force Field for Proteins.

Authors:  Parimal Kar; Srinivasa Murthy Gopal; Yi-Ming Cheng; Alexander Predeus; Michael Feig
Journal:  J Chem Theory Comput       Date:  2013-08-13       Impact factor: 6.006

Review 2.  Bottom-up Coarse-Graining: Principles and Perspectives.

Authors:  Jaehyeok Jin; Alexander J Pak; Aleksander E P Durumeric; Timothy D Loose; Gregory A Voth
Journal:  J Chem Theory Comput       Date:  2022-09-07       Impact factor: 6.578

3.  Multiscale simulations of the structure and dynamics of stereoregular poly(methyl methacrylate)s.

Authors:  Chaofu Wu
Journal:  J Mol Model       Date:  2014-08-02       Impact factor: 1.810

4.  Melt-phase behavior of collapsed PMMA/PVC chains revealed by multiscale simulations.

Authors:  Chaofu Wu
Journal:  J Mol Model       Date:  2016-04-01       Impact factor: 1.810

  4 in total

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