Literature DB >> 21538244

Sphingomonas jejuensis sp. nov., isolated from marine sponge Hymeniacidon flavia.

Sanghwa Park1, Akira Yokota, Takashi Itoh, Jin-Sook Park.   

Abstract

A Gram-negative, non-motile, rod shaped, and orange-pigmented chemoheterotrophic bacterium, strain MS-31(T) was isolated from the marine sponge Hymeniacidon flavia, collected from near Jeju Island, Korea. The Strain MS-31(T) was subjected to a polyphasic taxonomic study. The phylogenetic analysis based on the 16S rRNA gene sequences revealed that the novel isolate could be affiliated within the genus Sphingomonas. The strain MS-31(T) showed 95.6% of 16S rRNA gene sequence similarity with the most closely related species Sphingomonas koreensis JSS26(T). The DNA G+C content of the strain MS-31(T) was 69.4 mol%. The major isoprenoid quinone was ubiqunone 10 and predominant cellular fatty acids were summed feature 7 (comprising C(18:1) ω7c, C(18:1) Ω9t and/or C(18:1) ωl2t, 39.7%), C(16:0) (16.3%), C(14:0) 2OH (15.9%) and summed feature 3 (comprising C(16:1) ω7c and/or C(15:0) iso 2OH, 11.7%). The polar lipids were sphingoglycolipid, phosphatidyletha-nolamine, phosphatidylglycerol, diphosphatidylglycerol and unidentified glycolipid. Based on the evidence from the polyphasic taxonomic study, the strain should be classified as a new species of the genus Sphingomonas. As a result, the name Sphingomonas jejuensis sp. nov. (type strain MS-31(T) =KCTC 23321(T) =NBRC 107775(T)) is proposed.

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Year:  2011        PMID: 21538244     DOI: 10.1007/s12275-011-0500-z

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   3.422


  17 in total

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Authors:  J C DITTMER; R L LESTER
Journal:  J Lipid Res       Date:  1964-01       Impact factor: 5.922

2.  16S ribosomal DNA amplification for phylogenetic study.

Authors:  W G Weisburg; S M Barns; D A Pelletier; D J Lane
Journal:  J Bacteriol       Date:  1991-01       Impact factor: 3.490

3.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

4.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

5.  Sphingomonas pituitosa sp. nov., an exopolysaccharide-producing bacterium that secretes an unusual type of sphingan.

Authors:  E B Denner; S Paukner; P Kämpfer; E R Moore; W R Abraham; H J Busse; G Wanner; W Lubitz
Journal:  Int J Syst Evol Microbiol       Date:  2001-05       Impact factor: 2.747

6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

7.  Sphingomonas aquatilis sp. nov., Sphingomonas koreensis sp. nov., and Sphingomonas taejonensis sp. nov., yellow-pigmented bacteria isolated from natural mineral water.

Authors:  J S Lee; Y K Shin; J H Yoon; M Takeuchi; Y R Pyun; Y H Park
Journal:  Int J Syst Evol Microbiol       Date:  2001-07       Impact factor: 2.747

8.  Sphingomonas dokdonensis sp. nov., isolated from soil.

Authors:  Jung-Hoon Yoon; Mi-Hwa Lee; So-Jung Kang; Soo-Young Lee; Tae-Kwang Oh
Journal:  Int J Syst Evol Microbiol       Date:  2006-09       Impact factor: 2.747

9.  Sphingomonas molluscorum sp. nov., a novel marine isolate with antimicrobial activity.

Authors:  Lyudmila A Romanenko; Masataka Uchino; Galina M Frolova; Naoto Tanaka; Natalia I Kalinovskaya; Nicolai Latyshev; Valery V Mikhailov
Journal:  Int J Syst Evol Microbiol       Date:  2007-02       Impact factor: 2.747

10.  Polar lipid and fatty acid profiles--re-vitalizing old approaches as a modern tool for the classification of mycoplasmas?

Authors:  Hanna Lucia Worliczek; Peter Kämpfer; Renate Rosengarten; Brian J Tindall; Hans-Jürgen Busse
Journal:  Syst Appl Microbiol       Date:  2007-05-07       Impact factor: 4.022

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