Literature DB >> 21535477

Chromatin under mechanical stress: from single 30 nm fibers to single nucleosomes.

Jan Bednar1, Stefan Dimitrov.   

Abstract

About a decade ago, the elastic properties of a single chromatin fiber and, subsequently, those of a single nucleosome started to be explored using optical and magnetic tweezers. These techniques have allowed direct measurements of several essential physical parameters of individual nucleosomes and nucleosomal arrays, including the forces responsible for the maintenance of the structure of both the chromatin fiber and the individual nucleosomes, as well as the mechanism of their unwinding under mechanical stress. Experiments on the assembly of individual chromatin fibers have illustrated the complexity of the process and the key role of certain specific components. Nevertheless a substantial disparity exists in the data reported from various experiments. Chromatin, unlike naked DNA, is a system which is extremely sensitive to environmental conditions, and studies carried out under even slightly different conditions are difficult to compare directly. In this review we summarize the available data and their impact on our knowledge of both nucleosomal structure and the dynamics of nucleosome and chromatin fiber assembly and organization. Journal compilation
© 2011 FEBS. No claim to original French government works.

Mesh:

Substances:

Year:  2011        PMID: 21535477     DOI: 10.1111/j.1742-4658.2011.08153.x

Source DB:  PubMed          Journal:  FEBS J        ISSN: 1742-464X            Impact factor:   5.542


  5 in total

1.  Structure-driven homology pairing of chromatin fibers: the role of electrostatics and protein-induced bridging.

Authors:  A G Cherstvy; V B Teif
Journal:  J Biol Phys       Date:  2013-01-17       Impact factor: 1.365

2.  Simple horizontal magnetic tweezers for micromanipulation of single DNA molecules and DNA-protein complexes.

Authors:  Christopher P McAndrew; Christopher Tyson; Joseph Zischkau; Patrick Mehl; Pamela L Tuma; Ian L Pegg; Abhijit Sarkar
Journal:  Biotechniques       Date:  2016-01-01       Impact factor: 1.993

Review 3.  Rules of engagement for base excision repair in chromatin.

Authors:  Ian D Odell; Susan S Wallace; David S Pederson
Journal:  J Cell Physiol       Date:  2013-02       Impact factor: 6.384

4.  Measuring intermolecular rupture forces with a combined TIRF-optical trap microscope and DNA curtains.

Authors:  Ja Yil Lee; Feng Wang; Teresa Fazio; Shalom Wind; Eric C Greene
Journal:  Biochem Biophys Res Commun       Date:  2012-09-04       Impact factor: 3.575

5.  Constructing arrays of nucleosome positioning sequences using Gibson Assembly for single-molecule studies.

Authors:  Graeme A King; Erwin J G Peterman; Gijs J L Wuite; Dian Spakman
Journal:  Sci Rep       Date:  2020-06-18       Impact factor: 4.379

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.