Literature DB >> 21528859

Selective biomolecular nanoarrays for parallel single-molecule investigations.

Matteo Palma1, Justin J Abramson, Alon A Gorodetsky, Erika Penzo, Ruben L Gonzalez, Michael P Sheetz, Colin Nuckolls, James Hone, Shalom J Wind.   

Abstract

The ability to direct the self-assembly of biomolecules on surfaces with true nanoscale control is key for the creation of functional substrates. Herein we report the fabrication of nanoscale biomolecular arrays via selective self-assembly on nanopatterned surfaces and minimized nonspecific adsorption. We demonstrate that the platform developed allows for the simultaneous screening of specific protein-DNA binding events at the single-molecule level. The strategy presented here is generally applicable and enables high-throughput monitoring of biological activity in real time and with single-molecule resolution.

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Year:  2011        PMID: 21528859      PMCID: PMC3108261          DOI: 10.1021/ja201031g

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  28 in total

1.  Quantifying DNA-protein interactions by double-stranded DNA arrays.

Authors:  M L Bulyk; E Gentalen; D J Lockhart; G M Church
Journal:  Nat Biotechnol       Date:  1999-06       Impact factor: 54.908

Review 2.  Designing materials for biology and medicine.

Authors:  Robert Langer; David A Tirrell
Journal:  Nature       Date:  2004-04-01       Impact factor: 49.962

3.  Spontaneous assembly of subnanometre-ordered domains in the ligand shell of monolayer-protected nanoparticles.

Authors:  Alicia M Jackson; Jacob W Myerson; Francesco Stellacci
Journal:  Nat Mater       Date:  2004-04-18       Impact factor: 43.841

4.  Two-component graded deposition of biomolecules with a double-barreled nanopipette.

Authors:  Kit T Rodolfa; Andreas Bruckbauer; Dejian Zhou; Yuri E Korchev; David Klenerman
Journal:  Angew Chem Int Ed Engl       Date:  2005-10-28       Impact factor: 15.336

5.  Application of supramolecular nanostamping to the replication of DNA nanoarrays.

Authors:  Ozge Akbulut; Jin-Mi Jung; Ryan D Bennett; Ying Hu; Hee-Tae Jung; Robert E Cohen; Anne M Mayes; Francesco Stellacci
Journal:  Nano Lett       Date:  2007-10-17       Impact factor: 11.189

6.  Micro-nanostructured protein arrays: a tool for geometrically controlled ligand presentation.

Authors:  Daniel Aydin; Marco Schwieder; Ilia Louban; Stefan Knoppe; Jens Ulmer; Tobias L Haas; Henning Walczak; Joachim P Spatz
Journal:  Small       Date:  2009-05       Impact factor: 13.281

7.  Single-molecule experiments in biological physics: methods and applications.

Authors:  F Ritort
Journal:  J Phys Condens Matter       Date:  2006-07-25       Impact factor: 2.333

8.  Crystal structure of PvuII endonuclease reveals extensive structural homologies to EcoRV.

Authors:  A Athanasiadis; M Vlassi; D Kotsifaki; P A Tucker; K S Wilson; M Kokkinidis
Journal:  Nat Struct Biol       Date:  1994-07

9.  Direct patterning of modified oligonucleotides on metals and insulators by dip-pen nanolithography.

Authors:  L M Demers; D S Ginger; S-J Park; Z Li; S-W Chung; C A Mirkin
Journal:  Science       Date:  2002-06-07       Impact factor: 47.728

10.  One- and two-metal ion catalysis: global single-turnover kinetic analysis of the PvuII endonuclease mechanism.

Authors:  Fuqian Xie; Shabir H Qureshi; Grigorios A Papadakos; Cynthia M Dupureur
Journal:  Biochemistry       Date:  2008-11-25       Impact factor: 3.162

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  10 in total

1.  Label-free electrical detection of pyrophosphate generated from DNA polymerase reactions on field-effect devices.

Authors:  Grace M Credo; Xing Su; Kai Wu; Oguz H Elibol; David J Liu; Bobby Reddy; Ta-Wei Tsai; Brian R Dorvel; Jonathan S Daniels; Rashid Bashir; Madoo Varma
Journal:  Analyst       Date:  2012-01-19       Impact factor: 4.616

2.  Bifunctional nanoarrays for probing the immune response at the single-molecule level.

Authors:  Haogang Cai; David Depoil; Matteo Palma; Michael P Sheetz; Michael L Dustin; Shalom J Wind
Journal:  J Vac Sci Technol B Nanotechnol Microelectron       Date:  2013-10-08

3.  Single-molecule protein arrays enabled by scanning probe block copolymer lithography.

Authors:  Jinan Chai; Lu Shin Wong; Louise Giam; Chad A Mirkin
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-21       Impact factor: 11.205

4.  Single molecule protein patterning using hole mask colloidal lithography.

Authors:  William Lum; Dinesh Gautam; Jixin Chen; Laura B Sagle
Journal:  Nanoscale       Date:  2019-08-27       Impact factor: 7.790

5.  Low-cost fabrication of centimetre-scale periodic arrays of single plasmid DNA molecules.

Authors:  Brett Kirkland; Zhibin Wang; Peipei Zhang; Shin-Ichiro Takebayashi; Steven Lenhert; David M Gilbert; Jingjiao Guan
Journal:  Lab Chip       Date:  2013-07-04       Impact factor: 6.799

6.  Molecular Occupancy of Nanodot Arrays.

Authors:  Haogang Cai; Haguy Wolfenson; David Depoil; Michael L Dustin; Michael P Sheetz; Shalom J Wind
Journal:  ACS Nano       Date:  2016-03-15       Impact factor: 15.881

7.  Improved Glass Surface Passivation for Single-Molecule Nanoarrays.

Authors:  Haogang Cai; Shalom J Wind
Journal:  Langmuir       Date:  2016-09-26       Impact factor: 3.882

8.  Robustly passivated, gold nanoaperture arrays for single-molecule fluorescence microscopy.

Authors:  Colin D Kinz-Thompson; Matteo Palma; Dileep K Pulukkunat; Daniel Chenet; James Hone; Shalom J Wind; Ruben L Gonzalez
Journal:  ACS Nano       Date:  2013-09-06       Impact factor: 15.881

9.  High-throughput single-molecule analysis of DNA-protein interactions by tethered particle motion.

Authors:  Thomas Plénat; Catherine Tardin; Philippe Rousseau; Laurence Salomé
Journal:  Nucleic Acids Res       Date:  2012-03-15       Impact factor: 16.971

10.  High speed e-beam lithography for gold nanoarray fabrication and use in nanotechnology.

Authors:  Jorge Trasobares; François Vaurette; Marc François; Hans Romijn; Jean-Louis Codron; Dominique Vuillaume; Didier Théron; Nicolas Clément
Journal:  Beilstein J Nanotechnol       Date:  2014-10-30       Impact factor: 3.649

  10 in total

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