Literature DB >> 21527917

Controlling gene loss of function in newts with emphasis on lens regeneration.

Panagiotis A Tsonis1, Tracy Haynes, Nobuyasu Maki, Kenta Nakamura, Martin Miguel Casco-Robles, Shouta Yamada, Tomoya Miura, Chikafumi Chiba, Katia Del Rio-Tsonis.   

Abstract

Here we describe a protocol for gene loss of function during regeneration in newts, specifically applied to lens regeneration. Knockdown with the use of morpholinos can be achieved both in vitro and in vivo, depending on the experimental design. These methods achieve desirable levels of gene knockdown, and thus can be compared with methods developed for use in other animals, such as zebrafish. The technology has been applied to study molecular mechanisms during the process of lens regeneration by knocking down genes at specific stages and examining their effects on other genes and lens differentiation. The protocol can take a few days or up to 20 d to complete, depending on the duration of the experiment.

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Mesh:

Year:  2011        PMID: 21527917     DOI: 10.1038/nprot.2011.341

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  10 in total

Review 1.  Regeneration in vertebrates.

Authors:  P A Tsonis
Journal:  Dev Biol       Date:  2000-05-15       Impact factor: 3.582

Review 2.  Lens and retina regeneration: transdifferentiation, stem cells and clinical applications.

Authors:  Panagiotis A Tsonis; Katia Del Rio-Tsonis
Journal:  Exp Eye Res       Date:  2004-02       Impact factor: 3.467

Review 3.  Eye regeneration at the molecular age.

Authors:  Katia Del Rio-Tsonis; Panagiotis A Tsonis
Journal:  Dev Dyn       Date:  2003-02       Impact factor: 3.780

4.  Oocyte-type linker histone B4 is required for transdifferentiation of somatic cells in vivo.

Authors:  Nobuyasu Maki; Rinako Suetsugu-Maki; Shozo Sano; Kenta Nakamura; Osamu Nishimura; Hiroshi Tarui; Katia Del Rio-Tsonis; Keita Ohsumi; Kiyokazu Agata; Panagiotis A Tsonis
Journal:  FASEB J       Date:  2010-05-11       Impact factor: 5.191

Review 5.  Bridging the regeneration gap: genetic insights from diverse animal models.

Authors:  Alejandro Sánchez Alvarado; Panagiotis A Tsonis
Journal:  Nat Rev Genet       Date:  2006-11       Impact factor: 53.242

6.  BMP inhibition-driven regulation of six-3 underlies induction of newt lens regeneration.

Authors:  Matthew W Grogg; Mindy K Call; Mitsumasa Okamoto; M Natalia Vergara; Katia Del Rio-Tsonis; Panagiotis A Tsonis
Journal:  Nature       Date:  2005-12-08       Impact factor: 49.962

7.  Expressing exogenous genes in newts by transgenesis.

Authors:  Martin Miguel Casco-Robles; Shouta Yamada; Tomoya Miura; Kenta Nakamura; Tracy Haynes; Nobuyasu Maki; Katia Del Rio-Tsonis; Panagiotis A Tsonis; Chikafumi Chiba
Journal:  Nat Protoc       Date:  2011-04-14       Impact factor: 13.491

8.  The role of Pax-6 in lens regeneration.

Authors:  Mayur Madhavan; Tracy L Haynes; Nicholas C Frisch; Mindy K Call; Craig M Minich; Panagiotis A Tsonis; Katia Del Rio-Tsonis
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-26       Impact factor: 11.205

9.  Expression of stem cell pluripotency factors during regeneration in newts.

Authors:  Nobuyasu Maki; Rinako Suetsugu-Maki; Hiroshi Tarui; Kiyokazu Agata; Katia Del Rio-Tsonis; Panagiotis A Tsonis
Journal:  Dev Dyn       Date:  2009-06       Impact factor: 3.780

10.  Cells keep a memory of their tissue origin during axolotl limb regeneration.

Authors:  Martin Kragl; Dunja Knapp; Eugen Nacu; Shahryar Khattak; Malcolm Maden; Hans Henning Epperlein; Elly M Tanaka
Journal:  Nature       Date:  2009-07-02       Impact factor: 49.962

  10 in total
  8 in total

1.  Expressing exogenous genes in newts by transgenesis.

Authors:  Martin Miguel Casco-Robles; Shouta Yamada; Tomoya Miura; Kenta Nakamura; Tracy Haynes; Nobuyasu Maki; Katia Del Rio-Tsonis; Panagiotis A Tsonis; Chikafumi Chiba
Journal:  Nat Protoc       Date:  2011-04-14       Impact factor: 13.491

2.  Inducible genetic system for the axolotl.

Authors:  Jessica L Whited; Jessica A Lehoczky; Clifford J Tabin
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-06       Impact factor: 11.205

Review 3.  Insights into regeneration tool box: An animal model approach.

Authors:  Abijeet S Mehta; Amit Singh
Journal:  Dev Biol       Date:  2019-04-13       Impact factor: 3.582

4.  E2F8 as a Novel Therapeutic Target for Lung Cancer.

Authors:  Sin-Aye Park; James Platt; Jong Woo Lee; Francesc López-Giráldez; Roy S Herbst; Ja Seok Koo
Journal:  J Natl Cancer Inst       Date:  2015-06-18       Impact factor: 13.506

5.  Lessons learned from vivo-morpholinos: How to avoid vivo-morpholino toxicity.

Authors:  David P Ferguson; Lawrence J Dangott; J Timothy Lightfoot
Journal:  Biotechniques       Date:  2014-05-01       Impact factor: 1.993

6.  A transcriptome for the study of early processes of retinal regeneration in the adult newt, Cynops pyrrhogaster.

Authors:  Kenta Nakamura; Md Rafiqul Islam; Miyako Takayanagi; Hirofumi Yasumuro; Wataru Inami; Ailidana Kunahong; Roman M Casco-Robles; Fubito Toyama; Chikafumi Chiba
Journal:  PLoS One       Date:  2014-10-07       Impact factor: 3.240

7.  TALEN-mediated gene editing of the thrombospondin-1 locus in axolotl.

Authors:  Tzu-Hsing Kuo; Johanna E Kowalko; Tia DiTommaso; Mandi Nyambi; Daniel T Montoro; Jeffrey J Essner; Jessica L Whited
Journal:  Regeneration (Oxf)       Date:  2015-04-08

8.  Transcriptome analysis of newt lens regeneration reveals distinct gradients in gene expression patterns.

Authors:  Konstantinos Sousounis; Mario Looso; Nobuyasu Maki; Clifford J Ivester; Thomas Braun; Panagiotis A Tsonis
Journal:  PLoS One       Date:  2013-04-16       Impact factor: 3.240

  8 in total

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