| Literature DB >> 21523177 |
Louise N Dawe, Abeer Ahmed, Mohsen Daneshtalab.
Abstract
In the title mol-ecule, C(16)H(9)NO(5)S, there is an intra-molecular O-H⋯O hydrogen bond involving the quinolone carbonyl O atom and a carboxyl OH group. In the crystal, inter-molecular O-H⋯O hydrogen bonds between the carbonyl group of the quinolone carboxyl group, and a second carboxyl group on the thia-zeto moiety lead to the formation of chains propagating along [201] and perpendicular to the π-stacks of mol-ecules.Entities:
Year: 2011 PMID: 21523177 PMCID: PMC3051750 DOI: 10.1107/S1600536811003333
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H9NO5S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 4915 reflections |
| θ = 2.2–30.6° | |
| µ = 0.27 mm−1 | |
| β = 106.081 (8)° | Needle, colourless |
| 0.18 × 0.04 × 0.04 mm | |
| Rigaku Saturn diffractometer | 2769 independent reflections |
| Radiation source: fine-focus sealed tube | 2614 reflections with |
| graphite - Rigaku SHINE | |
| Detector resolution: 14.63 pixels mm-1 | θmax = 26.5°, θmin = 2.5° |
| ω scans | |
| Absorption correction: numerical ( | |
| 17300 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2769 reflections | (Δ/σ)max < 0.001 |
| 214 parameters | Δρmax = 0.31 e Å−3 |
| 2 restraints | Δρmin = −0.31 e Å−3 |
| Experimental. Spectroscopic data:1H-NMR: (500 MHz, DMSO-d6): δ= 8.27(1 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.60834 (14) | 0.26465 (6) | 0.14885 (8) | 0.0347 (3) | |
| O1 | 0.5029 (4) | −0.01520 (17) | 0.3384 (2) | 0.0387 (7) | |
| O2 | 0.2537 (4) | 0.33079 (19) | −0.0999 (3) | 0.0512 (8) | |
| O3 | 0.1270 (4) | 0.25356 (17) | 0.0178 (2) | 0.0370 (6) | |
| O4 | 0.7870 (4) | 0.20609 (17) | 0.3966 (2) | 0.0379 (7) | |
| O5 | 0.7226 (4) | 0.08587 (19) | 0.4695 (2) | 0.0439 (7) | |
| N1 | 0.4277 (4) | 0.14703 (17) | 0.0711 (2) | 0.0257 (6) | |
| C1 | 0.5397 (5) | 0.1656 (2) | 0.1790 (3) | 0.0274 (7) | |
| C2 | 0.5731 (5) | 0.1139 (2) | 0.2722 (3) | 0.0289 (8) | |
| C3 | 0.4829 (5) | 0.0354 (2) | 0.2544 (3) | 0.0303 (8) | |
| C4 | 0.3696 (5) | 0.0139 (2) | 0.1369 (3) | 0.0277 (8) | |
| C5 | 0.2892 (5) | −0.0668 (2) | 0.1153 (3) | 0.0318 (8) | |
| H5 | 0.3105 | −0.1057 | 0.1774 | 0.038* | |
| C6 | 0.1828 (5) | −0.0887 (2) | 0.0074 (3) | 0.0317 (8) | |
| H6 | 0.1297 | −0.1428 | −0.0048 | 0.038* | |
| C7 | 0.1484 (5) | −0.0329 (2) | −0.0882 (3) | 0.0281 (8) | |
| C8 | 0.0343 (5) | −0.0566 (2) | −0.2002 (3) | 0.0327 (8) | |
| H8 | −0.0180 | −0.1108 | −0.2118 | 0.039* | |
| C9 | −0.0019 (5) | −0.0027 (3) | −0.2920 (3) | 0.0364 (9) | |
| H9 | −0.0819 | −0.0190 | −0.3661 | 0.044* | |
| C10 | 0.0790 (6) | 0.0762 (2) | −0.2765 (3) | 0.0359 (9) | |
| H10 | 0.0552 | 0.1130 | −0.3410 | 0.043* | |
| C11 | 0.1927 (5) | 0.1015 (2) | −0.1696 (3) | 0.0324 (8) | |
| H11 | 0.2475 | 0.1553 | −0.1611 | 0.039* | |
| C12 | 0.2288 (5) | 0.0480 (2) | −0.0719 (3) | 0.0275 (8) | |
| C13 | 0.3401 (5) | 0.0702 (2) | 0.0439 (3) | 0.0254 (7) | |
| C14 | 0.4427 (5) | 0.2249 (2) | 0.0104 (3) | 0.0298 (8) | |
| H14 | 0.5090 | 0.2174 | −0.0521 | 0.036* | |
| C15 | 0.2618 (5) | 0.2759 (2) | −0.0304 (3) | 0.0327 (8) | |
| C16 | 0.7025 (5) | 0.1379 (2) | 0.3852 (3) | 0.0332 (9) | |
| H5A | 0.649 (6) | 0.039 (2) | 0.432 (4) | 0.052* | |
| H3 | 0.008 (4) | 0.277 (2) | −0.029 (3) | 0.044* |
| S1 | 0.0343 (5) | 0.0303 (5) | 0.0351 (5) | −0.0046 (4) | 0.0023 (4) | −0.0016 (4) |
| O1 | 0.0403 (16) | 0.0408 (16) | 0.0313 (14) | 0.0000 (12) | 0.0036 (12) | 0.0104 (12) |
| O2 | 0.0460 (17) | 0.0450 (17) | 0.062 (2) | 0.0053 (14) | 0.0138 (15) | 0.0244 (16) |
| O3 | 0.0304 (14) | 0.0391 (15) | 0.0396 (15) | 0.0034 (12) | 0.0065 (12) | 0.0059 (12) |
| O4 | 0.0335 (14) | 0.0420 (16) | 0.0337 (14) | −0.0013 (13) | 0.0022 (11) | −0.0073 (12) |
| O5 | 0.0438 (17) | 0.0558 (19) | 0.0260 (14) | −0.0055 (14) | −0.0006 (12) | 0.0038 (13) |
| N1 | 0.0257 (15) | 0.0240 (15) | 0.0263 (15) | −0.0017 (12) | 0.0053 (12) | 0.0024 (12) |
| C1 | 0.0220 (17) | 0.0300 (18) | 0.0289 (18) | −0.0005 (14) | 0.0051 (14) | −0.0049 (15) |
| C2 | 0.0265 (18) | 0.033 (2) | 0.0273 (18) | −0.0005 (15) | 0.0080 (14) | −0.0024 (15) |
| C3 | 0.0285 (18) | 0.036 (2) | 0.0268 (18) | 0.0060 (16) | 0.0076 (14) | 0.0044 (15) |
| C4 | 0.0243 (17) | 0.0300 (19) | 0.0294 (18) | 0.0035 (15) | 0.0087 (14) | 0.0009 (15) |
| C5 | 0.0285 (19) | 0.0283 (19) | 0.040 (2) | 0.0039 (15) | 0.0111 (16) | 0.0066 (16) |
| C6 | 0.0278 (18) | 0.0252 (19) | 0.042 (2) | 0.0007 (15) | 0.0092 (16) | 0.0008 (16) |
| C7 | 0.0237 (17) | 0.0275 (18) | 0.0326 (19) | 0.0035 (14) | 0.0072 (14) | −0.0029 (15) |
| C8 | 0.0259 (18) | 0.033 (2) | 0.039 (2) | −0.0002 (15) | 0.0076 (16) | −0.0087 (17) |
| C9 | 0.0282 (19) | 0.045 (2) | 0.031 (2) | 0.0022 (17) | 0.0004 (15) | −0.0106 (17) |
| C10 | 0.039 (2) | 0.038 (2) | 0.0280 (19) | 0.0004 (18) | 0.0058 (16) | 0.0025 (17) |
| C11 | 0.034 (2) | 0.0300 (19) | 0.0323 (19) | −0.0032 (16) | 0.0082 (16) | −0.0041 (16) |
| C12 | 0.0220 (17) | 0.0298 (19) | 0.0303 (18) | 0.0010 (14) | 0.0065 (14) | −0.0007 (15) |
| C13 | 0.0224 (16) | 0.0250 (17) | 0.0302 (18) | 0.0013 (14) | 0.0094 (14) | 0.0003 (15) |
| C14 | 0.0265 (18) | 0.0290 (19) | 0.0329 (19) | 0.0002 (15) | 0.0065 (15) | 0.0027 (15) |
| C15 | 0.035 (2) | 0.0271 (19) | 0.0325 (19) | −0.0016 (16) | 0.0029 (16) | −0.0013 (16) |
| C16 | 0.0300 (19) | 0.044 (2) | 0.0267 (19) | 0.0051 (17) | 0.0093 (15) | −0.0021 (17) |
| S1—C1 | 1.744 (4) | C5—C6 | 1.351 (5) |
| S1—C14 | 1.866 (4) | C5—H5 | 0.9500 |
| O1—C3 | 1.271 (4) | C6—C7 | 1.421 (5) |
| O2—C15 | 1.205 (4) | C6—H6 | 0.9500 |
| O3—C15 | 1.314 (5) | C7—C8 | 1.416 (5) |
| O3—H3 | 0.963 (19) | C7—C12 | 1.423 (5) |
| O4—C16 | 1.250 (5) | C8—C9 | 1.366 (5) |
| O5—C16 | 1.288 (5) | C8—H8 | 0.9500 |
| O5—H5A | 0.965 (19) | C9—C10 | 1.394 (6) |
| N1—C1 | 1.350 (4) | C9—H9 | 0.9500 |
| N1—C13 | 1.392 (4) | C10—C11 | 1.375 (5) |
| N1—C14 | 1.472 (4) | C10—H10 | 0.9500 |
| C1—C2 | 1.358 (5) | C11—C12 | 1.416 (5) |
| C2—C3 | 1.416 (5) | C11—H11 | 0.9500 |
| C2—C16 | 1.464 (5) | C12—C13 | 1.438 (5) |
| C3—C4 | 1.456 (5) | C14—C15 | 1.509 (5) |
| C4—C13 | 1.406 (5) | C14—H14 | 1.0000 |
| C4—C5 | 1.423 (5) | ||
| C1—S1—C14 | 73.49 (16) | C7—C8—H8 | 119.5 |
| C15—O3—H3 | 107 (3) | C8—C9—C10 | 119.8 (3) |
| C16—O5—H5A | 103 (3) | C8—C9—H9 | 120.1 |
| C1—N1—C13 | 122.3 (3) | C10—C9—H9 | 120.1 |
| C1—N1—C14 | 99.9 (3) | C11—C10—C9 | 121.1 (4) |
| C13—N1—C14 | 137.7 (3) | C11—C10—H10 | 119.5 |
| N1—C1—C2 | 124.6 (3) | C9—C10—H10 | 119.5 |
| N1—C1—S1 | 97.9 (2) | C10—C11—C12 | 120.5 (3) |
| C2—C1—S1 | 137.5 (3) | C10—C11—H11 | 119.7 |
| C1—C2—C3 | 117.2 (3) | C12—C11—H11 | 119.7 |
| C1—C2—C16 | 121.0 (3) | C11—C12—C7 | 118.3 (3) |
| C3—C2—C16 | 121.8 (3) | C11—C12—C13 | 124.3 (3) |
| O1—C3—C2 | 120.8 (3) | C7—C12—C13 | 117.3 (3) |
| O1—C3—C4 | 121.0 (3) | N1—C13—C4 | 115.7 (3) |
| C2—C3—C4 | 118.2 (3) | N1—C13—C12 | 123.0 (3) |
| C13—C4—C5 | 119.1 (3) | C4—C13—C12 | 121.3 (3) |
| C13—C4—C3 | 121.8 (3) | N1—C14—C15 | 116.8 (3) |
| C5—C4—C3 | 119.1 (3) | N1—C14—S1 | 88.6 (2) |
| C6—C5—C4 | 120.6 (3) | C15—C14—S1 | 112.6 (3) |
| C6—C5—H5 | 119.7 | N1—C14—H14 | 112.3 |
| C4—C5—H5 | 119.7 | C15—C14—H14 | 112.3 |
| C5—C6—C7 | 121.7 (3) | S1—C14—H14 | 112.3 |
| C5—C6—H6 | 119.2 | O2—C15—O3 | 127.1 (4) |
| C7—C6—H6 | 119.2 | O2—C15—C14 | 119.8 (4) |
| C8—C7—C6 | 120.8 (3) | O3—C15—C14 | 113.1 (3) |
| C8—C7—C12 | 119.2 (3) | O4—C16—O5 | 123.0 (3) |
| C6—C7—C12 | 120.0 (3) | O4—C16—C2 | 120.2 (3) |
| C9—C8—C7 | 121.0 (4) | O5—C16—C2 | 116.8 (4) |
| C9—C8—H8 | 119.5 |
| H··· | ||||
| O5—H5A···O1 | 0.96 (4) | 1.57 (4) | 2.504 (4) | 161 (4) |
| O3—H3···O4i | 0.97 (3) | 1.62 (3) | 2.569 (4) | 166 (3) |
| π···π | Distance | Angle of Elevation |
| Cg1···Cg2i | 3.560 (2) | 19.56 |
| Cg3···Cg2i | 3.644 (2) | 22.75 |
| Cg3···Cg3i | 3.688 (2) | 24.39 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O5—H5 | 0.96 (4) | 1.57 (4) | 2.504 (4) | 161 (4) |
| O3—H3⋯O4i | 0.97 (3) | 1.62 (3) | 2.569 (4) | 166 (3) |
Symmetry code: (i) .
π⋯π interactions (Å, °)
Angle of elevation defined as the angle of the Cg(I)→Cg(J) vector and the normal to plane J. Cg1, Cg2 and Cg3 are the centroids of the C7–C12, N1/C1–C4/C13 and C4–C7/C12/C13 rings, respectively.
| π⋯π | Distance | Angle of Elevation |
|---|---|---|
| 3.560 (2) | 19.56 | |
| 3.644 (2) | 22.75 | |
| 3.688 (2) | 24.39 |
Symmetry code: (i) −x + 1, −y, −z.