Literature DB >> 21523110

4-[5-(Pyridin-4-yl)-1,3,4-oxadiazol-2-yl]pyridinium benzoate.

Meng Ting Han1, Yuan Zhang.   

Abstract

In the title compound, C(12)H(9)N(4)O(+)·C(7)H(5)O(2) (-), π-π stacking inter-actions [centroid-centroid distance = 3.6275 (14)  Å] stabilize the crystal structure. The dihedral angles between the central ring and the terminal rings are 3.27 (12) and 10.30 (13)°.

Entities:  

Year:  2011        PMID: 21523110      PMCID: PMC3051668          DOI: 10.1107/S1600536811001358

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the development of ferroelectric compounds, see: Haertling et al. (1999 ▶); Homes et al. (2001 ▶). For the synthesis of a variety of compounds with potential piezoelectric and ferroelectric properties, see: Ye et al. (2006 ▶); Zhang et al. (2008 ▶).

Experimental

Crystal data

C12H9N4O+·C7H5O2 M = 346.34 Monoclinic, a = 20.459 (4) Å b = 7.1958 (14) Å c = 11.249 (2) Å β = 90.53 (3)° V = 1656.0 (5) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.20 × 0.20 × 0.20 mm

Data collection

Rigaku Mercury2 diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.854, T max = 1.000 16725 measured reflections 3808 independent reflections 2248 reflections with I > 2σ(I) R int = 0.064

Refinement

R[F 2 > 2σ(F 2)] = 0.059 wR(F 2) = 0.171 S = 1.02 3808 reflections 236 parameters H-atom parameters constrained Δρmax = 0.27 e Å−3 Δρmin = −0.28 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811001358/jh2244sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811001358/jh2244Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H9N4O+·C7H5O2F(000) = 720
Mr = 346.34Dx = 1.389 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3808 reflections
a = 20.459 (4) Åθ = 2.6–27.5°
b = 7.1958 (14) ŵ = 0.10 mm1
c = 11.249 (2) ÅT = 293 K
β = 90.53 (3)°Prism, colourless
V = 1656.0 (5) Å30.20 × 0.20 × 0.20 mm
Z = 4
Rigaku Mercury2 diffractometer3808 independent reflections
Radiation source: fine-focus sealed tube2248 reflections with I > 2σ(I)
graphiteRint = 0.064
Detector resolution: 13.6612 pixels mm-1θmax = 27.5°, θmin = 3.0°
CCD_Profile_fitting scansh = −26→26
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −9→9
Tmin = 0.854, Tmax = 1.000l = −14→14
16725 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.059H-atom parameters constrained
wR(F2) = 0.171w = 1/[σ2(Fo2) + (0.079P)2 + 0.2253P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
3808 reflectionsΔρmax = 0.27 e Å3
236 parametersΔρmin = −0.28 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0130 (18)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.11341 (11)0.8827 (3)0.1577 (2)0.0468 (5)
C20.18546 (10)0.8838 (3)0.13768 (18)0.0406 (5)
C30.22890 (10)0.9438 (3)0.22500 (19)0.0453 (5)
H30.21330.98530.29770.054*
C40.29500 (11)0.9420 (3)0.2041 (2)0.0529 (6)
H40.32400.98310.26260.064*
C50.31834 (12)0.8796 (3)0.0974 (2)0.0602 (7)
H50.36310.87800.08390.072*
C60.27599 (13)0.8197 (3)0.0105 (2)0.0625 (7)
H60.29210.7771−0.06150.075*
C70.20926 (12)0.8224 (3)0.02954 (19)0.0510 (6)
H70.18050.7831−0.02990.061*
C80.04872 (11)0.3443 (3)0.0797 (2)0.0566 (6)
H80.01710.31370.02310.068*
C90.11320 (10)0.3396 (3)0.0482 (2)0.0494 (6)
H90.12510.3092−0.02900.059*
C100.16028 (10)0.3805 (3)0.13262 (18)0.0398 (5)
C110.14062 (10)0.4269 (3)0.2463 (2)0.0471 (6)
H110.17120.45380.30540.057*
C120.07469 (11)0.4324 (3)0.2698 (2)0.0545 (6)
H120.06120.46620.34550.065*
C130.22928 (10)0.3753 (3)0.10114 (18)0.0391 (5)
C140.33195 (10)0.3951 (3)0.12671 (18)0.0401 (5)
C150.50844 (12)0.4366 (4)0.2044 (3)0.0739 (8)
H150.54810.44100.16490.089*
C160.45215 (11)0.4228 (4)0.1364 (2)0.0634 (7)
H160.45410.41840.05390.076*
C170.39284 (10)0.4158 (3)0.19378 (19)0.0430 (5)
C180.39322 (11)0.4232 (3)0.3154 (2)0.0572 (7)
H180.35420.41950.35720.069*
C190.45201 (13)0.4362 (4)0.3748 (2)0.0721 (8)
H190.45130.44000.45750.086*
N10.02979 (9)0.3912 (3)0.1885 (2)0.0577 (6)
H1A−0.01110.39470.20580.069*
N20.25515 (9)0.3426 (3)−0.00105 (16)0.0489 (5)
N30.32318 (9)0.3568 (3)0.01599 (16)0.0493 (5)
N40.50991 (10)0.4439 (3)0.3221 (2)0.0726 (7)
O10.07395 (8)0.8483 (3)0.08005 (16)0.0711 (5)
O20.09672 (7)0.9211 (2)0.26772 (15)0.0629 (5)
O30.27482 (6)0.40949 (19)0.18688 (12)0.0406 (4)
U11U22U33U12U13U23
C10.0439 (13)0.0411 (12)0.0553 (15)−0.0043 (10)−0.0113 (11)−0.0002 (10)
C20.0444 (12)0.0344 (11)0.0429 (12)−0.0029 (9)−0.0044 (9)0.0034 (9)
C30.0413 (12)0.0522 (13)0.0422 (12)−0.0002 (10)−0.0042 (9)0.0024 (10)
C40.0401 (13)0.0595 (15)0.0591 (15)−0.0068 (11)−0.0098 (11)0.0076 (11)
C50.0448 (14)0.0601 (16)0.0758 (18)−0.0034 (12)0.0100 (13)0.0098 (13)
C60.0682 (18)0.0578 (16)0.0618 (16)−0.0058 (13)0.0178 (13)−0.0026 (12)
C70.0615 (15)0.0460 (13)0.0456 (13)−0.0091 (11)−0.0039 (11)0.0015 (10)
C80.0395 (13)0.0617 (15)0.0682 (17)−0.0021 (11)−0.0132 (12)−0.0008 (12)
C90.0428 (13)0.0561 (14)0.0492 (13)0.0003 (10)−0.0092 (10)−0.0042 (11)
C100.0370 (11)0.0373 (11)0.0451 (12)−0.0022 (9)−0.0050 (9)0.0046 (9)
C110.0388 (12)0.0560 (14)0.0464 (13)−0.0034 (10)−0.0063 (10)0.0027 (10)
C120.0451 (13)0.0617 (16)0.0569 (15)0.0032 (11)0.0027 (11)0.0064 (11)
C130.0407 (11)0.0394 (12)0.0372 (11)−0.0030 (9)−0.0074 (9)−0.0002 (9)
C140.0353 (11)0.0432 (12)0.0419 (12)−0.0020 (9)0.0049 (9)0.0026 (9)
C150.0372 (14)0.103 (2)0.081 (2)−0.0078 (14)0.0073 (13)−0.0025 (16)
C160.0410 (13)0.092 (2)0.0574 (15)−0.0070 (13)0.0037 (11)0.0018 (13)
C170.0362 (11)0.0467 (13)0.0460 (13)−0.0023 (9)0.0008 (9)0.0057 (9)
C180.0394 (13)0.0816 (18)0.0506 (14)−0.0053 (12)−0.0014 (11)0.0011 (12)
C190.0539 (16)0.104 (2)0.0579 (16)−0.0041 (15)−0.0127 (13)0.0004 (15)
N10.0328 (10)0.0649 (13)0.0754 (15)0.0006 (9)0.0003 (10)0.0121 (11)
N20.0457 (11)0.0590 (12)0.0419 (11)0.0019 (9)−0.0016 (8)−0.0020 (8)
N30.0417 (11)0.0635 (12)0.0427 (11)0.0022 (9)−0.0006 (8)−0.0010 (9)
N40.0459 (13)0.0927 (17)0.0788 (17)−0.0042 (11)−0.0120 (11)0.0011 (13)
O10.0483 (10)0.0923 (14)0.0722 (12)−0.0078 (9)−0.0216 (9)−0.0066 (10)
O20.0431 (9)0.0843 (13)0.0613 (11)−0.0048 (8)0.0007 (8)−0.0140 (9)
O30.0325 (8)0.0515 (9)0.0379 (8)−0.0036 (6)−0.0017 (6)0.0002 (6)
C1—O11.210 (2)C11—C121.377 (3)
C1—O21.316 (3)C11—H110.9300
C1—C21.493 (3)C12—N11.323 (3)
C2—C71.387 (3)C12—H120.9300
C2—C31.387 (3)C13—N21.292 (3)
C3—C41.375 (3)C13—O31.357 (2)
C3—H30.9300C14—N31.287 (3)
C4—C51.372 (3)C14—O31.360 (2)
C4—H40.9300C14—C171.458 (3)
C5—C61.370 (3)C15—N41.324 (3)
C5—H50.9300C15—C161.380 (3)
C6—C71.384 (3)C15—H150.9300
C6—H60.9300C16—C171.381 (3)
C7—H70.9300C16—H160.9300
C8—N11.332 (3)C17—C181.369 (3)
C8—C91.369 (3)C18—C191.374 (3)
C8—H80.9300C18—H180.9300
C9—C101.378 (3)C19—N41.331 (3)
C9—H90.9300C19—H190.9300
C10—C111.385 (3)N1—H1A0.8600
C10—C131.459 (3)N2—N31.407 (2)
O1—C1—O2123.0 (2)C10—C11—H11120.7
O1—C1—C2123.0 (2)N1—C12—C11122.4 (2)
O2—C1—C2113.95 (18)N1—C12—H12118.8
C7—C2—C3119.5 (2)C11—C12—H12118.8
C7—C2—C1119.06 (19)N2—C13—O3112.41 (18)
C3—C2—C1121.43 (19)N2—C13—C10128.76 (19)
C4—C3—C2120.0 (2)O3—C13—C10118.84 (17)
C4—C3—H3120.0N3—C14—O3112.67 (18)
C2—C3—H3120.0N3—C14—C17129.31 (19)
C5—C4—C3120.2 (2)O3—C14—C17117.96 (18)
C5—C4—H4119.9N4—C15—C16124.6 (2)
C3—C4—H4119.9N4—C15—H15117.7
C6—C5—C4120.3 (2)C16—C15—H15117.7
C6—C5—H5119.9C15—C16—C17118.4 (2)
C4—C5—H5119.9C15—C16—H16120.8
C5—C6—C7120.2 (2)C17—C16—H16120.8
C5—C6—H6119.9C18—C17—C16118.0 (2)
C7—C6—H6119.9C18—C17—C14121.20 (19)
C6—C7—C2119.7 (2)C16—C17—C14120.8 (2)
C6—C7—H7120.2C17—C18—C19119.1 (2)
C2—C7—H7120.2C17—C18—H18120.5
N1—C8—C9122.2 (2)C19—C18—H18120.5
N1—C8—H8118.9N4—C19—C18124.4 (3)
C9—C8—H8118.9N4—C19—H19117.8
C8—C9—C10119.1 (2)C18—C19—H19117.8
C8—C9—H9120.5C12—N1—C8119.1 (2)
C10—C9—H9120.5C12—N1—H1A120.5
C9—C10—C11118.7 (2)C8—N1—H1A120.5
C9—C10—C13119.94 (19)C13—N2—N3106.18 (17)
C11—C10—C13121.35 (18)C14—N3—N2106.04 (17)
C12—C11—C10118.5 (2)C15—N4—C19115.6 (2)
C12—C11—H11120.7C13—O3—C14102.71 (15)
O1—C1—C2—C7−7.7 (3)C15—C16—C17—C180.1 (4)
O2—C1—C2—C7171.85 (19)C15—C16—C17—C14−178.0 (2)
O1—C1—C2—C3172.7 (2)N3—C14—C17—C18−167.8 (2)
O2—C1—C2—C3−7.7 (3)O3—C14—C17—C189.0 (3)
C7—C2—C3—C40.0 (3)N3—C14—C17—C1610.2 (4)
C1—C2—C3—C4179.54 (19)O3—C14—C17—C16−172.9 (2)
C2—C3—C4—C5−0.5 (3)C16—C17—C18—C19−0.3 (4)
C3—C4—C5—C60.4 (4)C14—C17—C18—C19177.8 (2)
C4—C5—C6—C70.3 (4)C17—C18—C19—N40.6 (4)
C5—C6—C7—C2−0.8 (4)C11—C12—N1—C8−0.6 (3)
C3—C2—C7—C60.7 (3)C9—C8—N1—C12−0.9 (4)
C1—C2—C7—C6−178.9 (2)O3—C13—N2—N3−0.5 (2)
N1—C8—C9—C101.5 (4)C10—C13—N2—N3179.14 (19)
C8—C9—C10—C11−0.6 (3)O3—C14—N3—N2−0.4 (2)
C8—C9—C10—C13179.7 (2)C17—C14—N3—N2176.6 (2)
C9—C10—C11—C12−0.8 (3)C13—N2—N3—C140.5 (2)
C13—C10—C11—C12178.89 (19)C16—C15—N4—C190.3 (4)
C10—C11—C12—N11.4 (3)C18—C19—N4—C15−0.5 (4)
C9—C10—C13—N22.8 (3)N2—C13—O3—C140.2 (2)
C11—C10—C13—N2−176.8 (2)C10—C13—O3—C14−179.42 (17)
C9—C10—C13—O3−177.63 (18)N3—C14—O3—C130.1 (2)
C11—C10—C13—O32.7 (3)C17—C14—O3—C13−177.24 (18)
N4—C15—C16—C17−0.1 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O2i0.861.792.648 (2)174
C8—H8···O1ii0.932.483.371 (3)161
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O2i0.861.792.648 (2)174
C8—H8⋯O1ii0.932.483.371 (3)161

Symmetry codes: (i) ; (ii) .

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3.  A short history of SHELX.

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