Literature DB >> 21523100

4-tert-Butyl-pyridinium triiodide-4-tert-butyl-pyridine (1/1).

Hongshan He, Andrew G Sykes.   

Abstract

The title compound, C(9)H(14)N(+)·I(3) (-)·C(9)H(13)N, consists of monoprotonated 4-tert-butyl-pyridinium cations and triiodide anions. The triiodide ion has near-symmetric linear geometry, with bond lengths of 2.9105 (4) Å (I-I) and a bond angle of 177.55 (3)° (I-I-I). For this room-temperature structure, the butyl group on the pyridine ring is disordered and has been treated as a rigid rotator, modeled in three separate positions with 1/3, 1/3, 1/3 occupancies. The cations assemble into dimeric forms by way of N-H⋯N hydrogen bonds.

Entities:  

Year:  2011        PMID: 21523100      PMCID: PMC3051785          DOI: 10.1107/S1600536811001371

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of the 4-t-butyl­pyridine and iodide/triiodide system in dye-sensitized solar cells see: Campbell et al. (2004 ▶); Lee et al. (2010 ▶); Wang et al. (2005 ▶). For related structures, see: Fialho et al. (1996 ▶); Kochel (2006 ▶).

Experimental

Crystal data

C9H14N+·I3 −·C9H13N M = 652.12 Tetragonal, a = 11.6862 (4) Å c = 17.1665 (13) Å V = 2344.4 (2) Å3 Z = 4 Mo Kα radiation μ = 4.00 mm−1 T = 293 K 0.55 × 0.50 × 0.40 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2006 ▶) T min = 0.217, T max = 0.298 23722 measured reflections 2217 independent reflections 1758 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.090 S = 1.04 2217 reflections 119 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.80 e Å−3 Δρmin = −0.77 e Å−3 Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶), WinGX (Farrugia, 1999 ▶) and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811001371/sj5091sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811001371/sj5091Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H14N+·I3·C9H13NDx = 1.848 Mg m3
Mr = 652.12Mo Kα radiation, λ = 0.71073 Å
Tetragonal, P42/nCell parameters from 9942 reflections
Hall symbol: -P 4bcθ = 2.4–25.6°
a = 11.6862 (4) ŵ = 4.00 mm1
c = 17.1665 (13) ÅT = 293 K
V = 2344.4 (2) Å3Block, red
Z = 40.55 × 0.50 × 0.40 mm
F(000) = 1232
Bruker APEXII CCD area-detector diffractometer2217 independent reflections
Radiation source: fine-focus sealed tube1758 reflections with I > 2σ(I)
graphiteRint = 0.027
φ and ω scansθmax = 25.6°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2006)h = −14→14
Tmin = 0.217, Tmax = 0.298k = −14→14
23722 measured reflectionsl = −20→20
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.037H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.090w = 1/[σ2(Fo2) + (0.0303P)2 + 5.5874P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max < 0.001
2217 reflectionsΔρmax = 0.80 e Å3
119 parametersΔρmin = −0.77 e Å3
1 restraintExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.00208 (15)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
C10.0501 (4)0.9717 (5)0.3368 (3)0.0641 (12)
H10.05021.04140.31070.077*
C20.1482 (4)0.9081 (6)0.3407 (3)0.0749 (15)
H20.21400.93580.31690.090*
C30.0595 (5)0.7687 (5)0.4119 (3)0.0694 (14)
H30.06250.69880.43760.083*
C4−0.0414 (4)0.8291 (4)0.4105 (3)0.0608 (12)
H4−0.10550.80010.43600.073*
C5−0.0485 (4)0.9329 (4)0.3715 (2)0.0505 (10)
C6−0.1613 (4)0.9989 (4)0.3681 (3)0.0590 (12)
C7−0.179 (2)1.059 (2)0.2943 (13)0.099 (7)*0.33
H7A−0.15541.00990.25210.148*0.33
H7B−0.13381.12730.29370.148*0.33
H7C−0.25821.07750.28860.148*0.33
C8−0.2650 (16)0.9078 (16)0.3731 (13)0.077 (5)*0.33
H8A−0.26800.86410.32580.116*0.33
H8B−0.33590.94790.38010.116*0.33
H8C−0.25260.85730.41640.116*0.33
C9−0.1911 (15)1.0409 (17)0.4482 (9)0.051 (4)*0.33
H9A−0.13031.08820.46750.076*0.33
H9B−0.20170.97670.48230.076*0.33
H9C−0.26061.08470.44590.076*0.33
C7'−0.144 (2)1.125 (2)0.3487 (17)0.118 (8)*0.33
H7'1−0.11361.16390.39330.177*0.33
H7'2−0.21591.15840.33440.177*0.33
H7'3−0.09121.13160.30600.177*0.33
C8'−0.230 (2)0.953 (2)0.3061 (13)0.091 (7)*0.33
H8'1−0.30070.99470.30310.136*0.33
H8'2−0.24530.87390.31590.136*0.33
H8'3−0.18940.96090.25770.136*0.33
C9'−0.2236 (18)0.9924 (19)0.4480 (12)0.085 (6)*0.33
H9'1−0.16810.99340.48920.127*0.33
H9'2−0.26730.92300.45070.127*0.33
H9'3−0.27391.05690.45340.127*0.33
C8"−0.2550 (14)0.9235 (14)0.3301 (12)0.052 (3)*0.33
H8"1−0.32570.96530.32820.078*0.33
H8"2−0.26530.85530.36040.078*0.33
H8"3−0.23210.90330.27820.078*0.33
C7"−0.1486 (14)1.1071 (15)0.3079 (11)0.057 (4)*0.33
H7"1−0.09321.16020.32800.085*0.33
H7"2−0.22121.14490.30270.085*0.33
H7"3−0.12401.07980.25790.085*0.33
C9"−0.1668 (19)1.0791 (19)0.4363 (13)0.085 (7)*0.33
H9"1−0.09071.10220.45040.127*0.33
H9"2−0.20211.04100.47960.127*0.33
H9"3−0.21101.14520.42240.127*0.33
N10.1527 (4)0.8086 (4)0.3770 (3)0.0699 (12)
I10.25000.25000.38499 (3)0.06646 (18)
I20.05632 (4)0.40649 (4)0.38862 (3)0.1013 (2)
H990.220 (6)0.772 (11)0.381 (5)0.09 (4)*0.50
U11U22U33U12U13U23
C10.060 (3)0.068 (3)0.065 (3)−0.004 (2)0.000 (2)0.009 (2)
C20.048 (3)0.102 (4)0.074 (4)−0.002 (3)0.008 (3)−0.001 (3)
C30.067 (3)0.068 (3)0.073 (3)0.013 (3)−0.004 (3)0.008 (3)
C40.055 (3)0.059 (3)0.068 (3)0.001 (2)0.007 (2)0.007 (2)
C50.050 (2)0.055 (3)0.047 (2)0.0031 (19)−0.0037 (19)−0.0077 (19)
C60.057 (3)0.060 (3)0.061 (3)0.014 (2)−0.006 (2)−0.010 (2)
N10.053 (3)0.091 (3)0.066 (3)0.020 (2)−0.005 (2)−0.011 (2)
I10.0663 (3)0.0676 (3)0.0656 (3)0.0000 (2)0.0000.000
I20.0790 (3)0.1007 (4)0.1243 (4)0.0253 (2)−0.0064 (3)0.0184 (3)
C1—C21.368 (7)C8—H8C0.9600
C1—C51.375 (6)C9—H9A0.9600
C1—H10.9300C9—H9B0.9600
C2—N11.320 (7)C9—H9C0.9600
C2—H20.9300C7'—H7'10.9600
C3—N11.327 (7)C7'—H7'20.9600
C3—C41.374 (7)C7'—H7'30.9600
C3—H30.9300C8'—H8'10.9600
C4—C51.389 (6)C8'—H8'20.9600
C4—H40.9300C8'—H8'30.9600
C5—C61.528 (6)C9'—H9'10.9600
C6—C8'1.44 (2)C9'—H9'20.9600
C6—C71.46 (2)C9'—H9'30.9600
C6—C9"1.50 (2)C8"—H8"10.9600
C6—C91.500 (16)C8"—H8"20.9600
C6—C7'1.52 (3)C8"—H8"30.9600
C6—C8"1.549 (16)C7"—H7"10.9600
C6—C9'1.55 (2)C7"—H7"20.9600
C6—C81.614 (19)C7"—H7"30.9600
C6—C7"1.641 (17)C9"—H9"10.9600
C7—H7A0.9600C9"—H9"20.9600
C7—H7B0.9600C9"—H9"30.9600
C7—H7C0.9600N1—H990.90 (2)
C8—H8A0.9600I1—I2i2.9105 (4)
C8—H8B0.9600I1—I22.9105 (4)
C2—C1—C5120.2 (5)H7A—C7—H7C109.5
C2—C1—H1119.9H7B—C7—H7C109.5
C5—C1—H1119.9C6—C8—H8A109.5
N1—C2—C1122.4 (5)C6—C8—H8B109.5
N1—C2—H2118.8H8A—C8—H8B109.5
C1—C2—H2118.8C6—C8—H8C109.5
N1—C3—C4121.1 (5)H8A—C8—H8C109.5
N1—C3—H3119.4H8B—C8—H8C109.5
C4—C3—H3119.4C6—C9—H9A109.5
C3—C4—C5120.5 (5)C6—C9—H9B109.5
C3—C4—H4119.7H9A—C9—H9B109.5
C5—C4—H4119.7C6—C9—H9C109.5
C1—C5—C4116.5 (4)H9A—C9—H9C109.5
C1—C5—C6122.8 (4)H9B—C9—H9C109.5
C4—C5—C6120.7 (4)C6—C7'—H7'1109.5
C8'—C6—C9"141.9 (13)C6—C7'—H7'2109.5
C7—C6—C9"111.9 (14)H7'1—C7'—H7'2109.5
C8'—C6—C9132.2 (12)C6—C7'—H7'3109.5
C7—C6—C9127.3 (12)H7'1—C7'—H7'3109.5
C8'—C6—C7'105.7 (14)H7'2—C7'—H7'3109.5
C9"—C6—C7'64.7 (14)C6—C8'—H8'1109.5
C9—C6—C7'85.2 (13)C6—C8'—H8'2109.5
C8'—C6—C5108.8 (9)H8'1—C8'—H8'2109.5
C7—C6—C5113.2 (10)C6—C8'—H8'3109.5
C9"—C6—C5108.8 (9)H8'1—C8'—H8'3109.5
C9—C6—C5109.3 (7)H8'2—C8'—H8'3109.5
C7'—C6—C5112.3 (11)C6—C9'—H9'1109.5
C7—C6—C8"78.9 (12)C6—C9'—H9'2109.5
C9"—C6—C8"130.8 (11)H9'1—C9'—H9'2109.5
C9—C6—C8"114.0 (11)C6—C9'—H9'3109.5
C7'—C6—C8"123.5 (13)H9'1—C9'—H9'3109.5
C5—C6—C8"109.8 (6)H9'2—C9'—H9'3109.5
C8'—C6—C9'112.1 (14)C6—C8"—H8"1109.5
C7—C6—C9'136.4 (12)C6—C8"—H8"2109.5
C7'—C6—C9'107.7 (14)H8"1—C8"—H8"2109.5
C5—C6—C9'110.2 (8)C6—C8"—H8"3109.5
C8"—C6—C9'90.7 (11)H8"1—C8"—H8"3109.5
C7—C6—C8104.9 (12)H8"2—C8"—H8"3109.5
C9"—C6—C8109.8 (12)C6—C7"—H7"1109.5
C9—C6—C889.6 (11)C6—C7"—H7"2109.5
C7'—C6—C8138.5 (13)H7"1—C7"—H7"2109.5
C5—C6—C8108.2 (8)C6—C7"—H7"3109.5
C9'—C6—C864.5 (11)H7"1—C7"—H7"3109.5
C8'—C6—C7"82.5 (11)H7"2—C7"—H7"3109.5
C9"—C6—C7"90.8 (11)C6—C9"—H9"1109.5
C9—C6—C7"110.2 (10)C6—C9"—H9"2109.5
C5—C6—C7"109.6 (7)H9"1—C9"—H9"2109.5
C8"—C6—C7"103.7 (10)C6—C9"—H9"3109.5
C9'—C6—C7"129.5 (10)H9"1—C9"—H9"3109.5
C8—C6—C7"127.6 (10)H9"2—C9"—H9"3109.5
C6—C7—H7A109.5C2—N1—C3119.3 (4)
C6—C7—H7B109.5C2—N1—H99120 (9)
H7A—C7—H7B109.5C3—N1—H99121 (9)
C6—C7—H7C109.5I2i—I1—I2177.55 (3)
D—H···AD—HH···AD···AD—H···A
N1—H99···N1ii0.901.762.655 (7)172
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H99⋯N1i0.901.762.655 (7)172

Symmetry code: (i) .

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