| Literature DB >> 21523090 |
Hoong-Kun Fun, V Sumangala, G K Nagaraja, Boja Poojary, Suchada Chantrapromma.
Abstract
In the title 1,2,4-oxadiazole derivative, C(19)H(18)ClN(3)O(3), the 1,2,4-oxadiazole ring makes dihedral angles of 12.83 (8) and 4.89 (8)°, respectively, with the benzyl and 4-chloro-phenyl rings, while the dihedral angle between the benzyl and 4-chloro-phenyl rings is 11.53 (7)°. In the crystal, mol-ecules are linked by N-H⋯N hydrogen bonds into helical chains along the b axis. A weak C-H⋯π inter-action is also present.Entities:
Year: 2011 PMID: 21523090 PMCID: PMC3051527 DOI: 10.1107/S1600536811001504
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H18ClN3O3 | |
| Melting point = 405–409 K | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 4556 reflections |
| θ = 1.9–28.5° | |
| µ = 0.24 mm−1 | |
| Plate, colorless | |
| 0.41 × 0.35 × 0.21 mm | |
| Bruker APEXII CCD area-detector diffractometer | 4556 independent reflections |
| Radiation source: sealed tube | 3620 reflections with |
| graphite | |
| φ and ω scans | θmax = 28.5°, θmin = 1.9° |
| Absorption correction: multi-scan ( | |
| 15995 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.001 | |
| 4556 reflections | Δρmax = 0.14 e Å−3 |
| 241 parameters | Δρmin = −0.21 e Å−3 |
| 0 restraints | Absolute structure: Flack (1983), 1950 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.01 (6) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 1.06337 (9) | 0.74415 (5) | −0.14993 (2) | 0.08010 (19) | |
| O1 | 0.90644 (16) | 0.42996 (9) | 0.11883 (5) | 0.0490 (3) | |
| O2 | 0.62272 (16) | 0.60054 (11) | 0.29142 (7) | 0.0631 (4) | |
| O3 | 0.71211 (14) | 0.79437 (9) | 0.30763 (6) | 0.0501 (3) | |
| N1 | 1.00418 (18) | 0.59694 (10) | 0.16396 (6) | 0.0422 (3) | |
| N2 | 0.89957 (19) | 0.41084 (11) | 0.18577 (6) | 0.0487 (3) | |
| N3 | 0.90781 (17) | 0.65050 (11) | 0.29774 (6) | 0.0401 (3) | |
| C1 | 1.0718 (2) | 0.70094 (14) | 0.03799 (7) | 0.0470 (4) | |
| H1A | 1.1094 | 0.7446 | 0.0733 | 0.056* | |
| C2 | 1.0945 (2) | 0.74801 (15) | −0.02232 (8) | 0.0522 (4) | |
| H2A | 1.1470 | 0.8233 | −0.0279 | 0.063* | |
| C3 | 1.0385 (2) | 0.68209 (16) | −0.07420 (7) | 0.0499 (4) | |
| C4 | 0.9627 (2) | 0.56952 (14) | −0.06747 (8) | 0.0517 (4) | |
| H4A | 0.9283 | 0.5255 | −0.1031 | 0.062* | |
| C5 | 0.9386 (2) | 0.52308 (13) | −0.00694 (7) | 0.0469 (4) | |
| H5A | 0.8859 | 0.4478 | −0.0017 | 0.056* | |
| C6 | 0.9930 (2) | 0.58868 (12) | 0.04632 (7) | 0.0393 (3) | |
| C7 | 0.96954 (19) | 0.54258 (12) | 0.11114 (7) | 0.0386 (3) | |
| C8 | 0.9582 (2) | 0.51195 (12) | 0.20882 (7) | 0.0371 (3) | |
| C9 | 0.9872 (2) | 0.53376 (12) | 0.27932 (7) | 0.0417 (4) | |
| C10 | 0.7365 (2) | 0.67374 (13) | 0.29808 (7) | 0.0414 (3) | |
| C11 | 0.5372 (2) | 0.83404 (16) | 0.32187 (8) | 0.0528 (4) | |
| H11A | 0.4552 | 0.7744 | 0.3064 | 0.063* | |
| H11B | 0.5141 | 0.9106 | 0.3007 | 0.063* | |
| C12 | 0.51699 (19) | 0.84918 (13) | 0.39282 (7) | 0.0423 (3) | |
| C13 | 0.5898 (2) | 0.94799 (14) | 0.42406 (9) | 0.0545 (4) | |
| H13A | 0.6480 | 1.0070 | 0.4008 | 0.065* | |
| C14 | 0.5766 (3) | 0.95920 (16) | 0.48927 (9) | 0.0621 (5) | |
| H14A | 0.6270 | 1.0253 | 0.5096 | 0.074* | |
| C15 | 0.4903 (3) | 0.87436 (17) | 0.52416 (9) | 0.0591 (5) | |
| H15A | 0.4826 | 0.8825 | 0.5682 | 0.071* | |
| C16 | 0.4146 (2) | 0.77656 (16) | 0.49429 (8) | 0.0572 (4) | |
| H16A | 0.3541 | 0.7191 | 0.5179 | 0.069* | |
| C17 | 0.4292 (2) | 0.76457 (13) | 0.42877 (8) | 0.0496 (4) | |
| H17A | 0.3788 | 0.6981 | 0.4087 | 0.060* | |
| C18 | 1.1805 (2) | 0.54871 (16) | 0.28978 (9) | 0.0562 (5) | |
| H18A | 1.2220 | 0.6155 | 0.2647 | 0.084* | |
| H18B | 1.2389 | 0.4756 | 0.2773 | 0.084* | |
| H18C | 1.2024 | 0.5645 | 0.3340 | 0.084* | |
| C19 | 0.9170 (3) | 0.42786 (14) | 0.31875 (8) | 0.0592 (5) | |
| H19A | 0.7970 | 0.4162 | 0.3092 | 0.089* | |
| H19B | 0.9302 | 0.4456 | 0.3633 | 0.089* | |
| H19C | 0.9799 | 0.3552 | 0.3085 | 0.089* | |
| H1N3 | 0.973 (2) | 0.7115 (14) | 0.2985 (7) | 0.036 (4)* |
| Cl1 | 0.1106 (5) | 0.0857 (4) | 0.0440 (2) | 0.0012 (3) | 0.0132 (3) | 0.0075 (2) |
| O1 | 0.0635 (7) | 0.0416 (5) | 0.0418 (6) | −0.0124 (5) | −0.0050 (6) | −0.0044 (4) |
| O2 | 0.0508 (7) | 0.0552 (7) | 0.0833 (10) | −0.0086 (6) | −0.0013 (7) | 0.0010 (6) |
| O3 | 0.0486 (7) | 0.0433 (5) | 0.0584 (7) | 0.0076 (5) | 0.0118 (6) | 0.0012 (5) |
| N1 | 0.0508 (8) | 0.0373 (6) | 0.0384 (7) | −0.0039 (5) | 0.0004 (6) | −0.0046 (5) |
| N2 | 0.0609 (9) | 0.0431 (7) | 0.0422 (7) | −0.0097 (6) | −0.0013 (7) | −0.0010 (5) |
| N3 | 0.0438 (8) | 0.0338 (6) | 0.0425 (7) | −0.0013 (6) | 0.0046 (6) | −0.0040 (5) |
| C1 | 0.0536 (10) | 0.0451 (8) | 0.0422 (8) | −0.0064 (7) | −0.0001 (8) | −0.0097 (6) |
| C2 | 0.0575 (10) | 0.0478 (8) | 0.0514 (9) | −0.0079 (8) | 0.0081 (8) | −0.0012 (7) |
| C3 | 0.0530 (10) | 0.0577 (9) | 0.0389 (8) | 0.0070 (8) | 0.0062 (8) | −0.0006 (7) |
| C4 | 0.0598 (11) | 0.0534 (9) | 0.0420 (8) | 0.0038 (8) | −0.0090 (8) | −0.0110 (7) |
| C5 | 0.0536 (11) | 0.0415 (8) | 0.0457 (8) | −0.0013 (7) | −0.0070 (8) | −0.0065 (6) |
| C6 | 0.0399 (8) | 0.0388 (7) | 0.0390 (8) | 0.0034 (6) | 0.0000 (7) | −0.0060 (5) |
| C7 | 0.0376 (8) | 0.0352 (7) | 0.0431 (8) | −0.0002 (6) | −0.0026 (7) | −0.0057 (6) |
| C8 | 0.0374 (8) | 0.0328 (6) | 0.0410 (7) | 0.0000 (6) | 0.0007 (6) | −0.0021 (5) |
| C9 | 0.0507 (10) | 0.0357 (7) | 0.0389 (8) | 0.0043 (6) | 0.0017 (7) | −0.0032 (6) |
| C10 | 0.0496 (9) | 0.0419 (7) | 0.0327 (7) | 0.0033 (7) | 0.0047 (7) | 0.0044 (6) |
| C11 | 0.0474 (10) | 0.0591 (10) | 0.0518 (10) | 0.0146 (8) | 0.0031 (8) | 0.0053 (7) |
| C12 | 0.0345 (8) | 0.0425 (7) | 0.0499 (9) | 0.0088 (6) | 0.0019 (7) | 0.0026 (6) |
| C13 | 0.0503 (10) | 0.0438 (8) | 0.0692 (12) | −0.0025 (8) | 0.0048 (9) | 0.0023 (8) |
| C14 | 0.0618 (12) | 0.0539 (10) | 0.0705 (12) | 0.0008 (9) | −0.0075 (11) | −0.0185 (8) |
| C15 | 0.0585 (12) | 0.0680 (11) | 0.0507 (10) | 0.0107 (9) | 0.0034 (9) | −0.0074 (8) |
| C16 | 0.0589 (11) | 0.0567 (10) | 0.0561 (10) | −0.0002 (9) | 0.0101 (9) | 0.0080 (7) |
| C17 | 0.0506 (10) | 0.0423 (8) | 0.0560 (9) | −0.0043 (8) | 0.0001 (8) | −0.0035 (7) |
| C18 | 0.0540 (11) | 0.0618 (10) | 0.0528 (10) | 0.0117 (8) | −0.0128 (9) | −0.0138 (8) |
| C19 | 0.0924 (15) | 0.0401 (8) | 0.0452 (9) | 0.0039 (9) | 0.0064 (10) | 0.0028 (6) |
| Cl1—C3 | 1.7404 (16) | C8—C9 | 1.515 (2) |
| O1—C7 | 1.3422 (16) | C9—C18 | 1.523 (2) |
| O1—N2 | 1.4213 (17) | C9—C19 | 1.529 (2) |
| O2—C10 | 1.2023 (19) | C11—C12 | 1.506 (2) |
| O3—C10 | 1.3558 (18) | C11—H11A | 0.9700 |
| O3—C11 | 1.455 (2) | C11—H11B | 0.9700 |
| N1—C7 | 1.2877 (18) | C12—C17 | 1.378 (2) |
| N1—C8 | 1.3740 (19) | C12—C13 | 1.390 (2) |
| N2—C8 | 1.2955 (18) | C13—C14 | 1.378 (3) |
| N3—C10 | 1.352 (2) | C13—H13A | 0.9300 |
| N3—C9 | 1.4758 (18) | C14—C15 | 1.362 (3) |
| N3—H1N3 | 0.841 (16) | C14—H14A | 0.9300 |
| C1—C2 | 1.379 (2) | C15—C16 | 1.377 (3) |
| C1—C6 | 1.389 (2) | C15—H15A | 0.9300 |
| C1—H1A | 0.9300 | C16—C17 | 1.386 (2) |
| C2—C3 | 1.378 (2) | C16—H16A | 0.9300 |
| C2—H2A | 0.9300 | C17—H17A | 0.9300 |
| C3—C4 | 1.378 (2) | C18—H18A | 0.9600 |
| C4—C5 | 1.382 (2) | C18—H18B | 0.9600 |
| C4—H4A | 0.9300 | C18—H18C | 0.9600 |
| C5—C6 | 1.3957 (19) | C19—H19A | 0.9600 |
| C5—H5A | 0.9300 | C19—H19B | 0.9600 |
| C6—C7 | 1.463 (2) | C19—H19C | 0.9600 |
| C7—O1—N2 | 105.61 (10) | O2—C10—O3 | 124.84 (16) |
| C10—O3—C11 | 116.99 (13) | N3—C10—O3 | 108.82 (14) |
| C7—N1—C8 | 102.66 (12) | O3—C11—C12 | 109.46 (13) |
| C8—N2—O1 | 103.21 (11) | O3—C11—H11A | 109.8 |
| C10—N3—C9 | 125.11 (13) | C12—C11—H11A | 109.8 |
| C10—N3—H1N3 | 116.2 (10) | O3—C11—H11B | 109.8 |
| C9—N3—H1N3 | 116.6 (10) | C12—C11—H11B | 109.8 |
| C2—C1—C6 | 120.39 (14) | H11A—C11—H11B | 108.2 |
| C2—C1—H1A | 119.8 | C17—C12—C13 | 118.11 (15) |
| C6—C1—H1A | 119.8 | C17—C12—C11 | 121.18 (14) |
| C3—C2—C1 | 119.14 (15) | C13—C12—C11 | 120.70 (15) |
| C3—C2—H2A | 120.4 | C14—C13—C12 | 120.56 (16) |
| C1—C2—H2A | 120.4 | C14—C13—H13A | 119.7 |
| C2—C3—C4 | 121.76 (15) | C12—C13—H13A | 119.7 |
| C2—C3—Cl1 | 118.67 (13) | C15—C14—C13 | 120.61 (17) |
| C4—C3—Cl1 | 119.56 (13) | C15—C14—H14A | 119.7 |
| C3—C4—C5 | 118.97 (14) | C13—C14—H14A | 119.7 |
| C3—C4—H4A | 120.5 | C14—C15—C16 | 120.02 (18) |
| C5—C4—H4A | 120.5 | C14—C15—H15A | 120.0 |
| C4—C5—C6 | 120.26 (15) | C16—C15—H15A | 120.0 |
| C4—C5—H5A | 119.9 | C15—C16—C17 | 119.42 (16) |
| C6—C5—H5A | 119.9 | C15—C16—H16A | 120.3 |
| C1—C6—C5 | 119.47 (14) | C17—C16—H16A | 120.3 |
| C1—C6—C7 | 118.68 (13) | C12—C17—C16 | 121.27 (15) |
| C5—C6—C7 | 121.84 (14) | C12—C17—H17A | 119.4 |
| N1—C7—O1 | 113.68 (13) | C16—C17—H17A | 119.4 |
| N1—C7—C6 | 127.82 (13) | C9—C18—H18A | 109.5 |
| O1—C7—C6 | 118.50 (12) | C9—C18—H18B | 109.5 |
| N2—C8—N1 | 114.83 (13) | H18A—C18—H18B | 109.5 |
| N2—C8—C9 | 123.53 (13) | C9—C18—H18C | 109.5 |
| N1—C8—C9 | 121.50 (12) | H18A—C18—H18C | 109.5 |
| N3—C9—C8 | 109.39 (12) | H18B—C18—H18C | 109.5 |
| N3—C9—C18 | 106.14 (13) | C9—C19—H19A | 109.5 |
| C8—C9—C18 | 107.66 (13) | C9—C19—H19B | 109.5 |
| N3—C9—C19 | 111.94 (13) | H19A—C19—H19B | 109.5 |
| C8—C9—C19 | 110.79 (12) | C9—C19—H19C | 109.5 |
| C18—C9—C19 | 110.72 (15) | H19A—C19—H19C | 109.5 |
| O2—C10—N3 | 126.34 (14) | H19B—C19—H19C | 109.5 |
| C7—O1—N2—C8 | −0.08 (16) | C10—N3—C9—C18 | −177.07 (15) |
| C6—C1—C2—C3 | −0.2 (3) | C10—N3—C9—C19 | −56.2 (2) |
| C1—C2—C3—C4 | −1.0 (3) | N2—C8—C9—N3 | −131.00 (16) |
| C1—C2—C3—Cl1 | 178.49 (14) | N1—C8—C9—N3 | 53.48 (19) |
| C2—C3—C4—C5 | 1.6 (3) | N2—C8—C9—C18 | 114.08 (17) |
| Cl1—C3—C4—C5 | −177.88 (13) | N1—C8—C9—C18 | −61.44 (18) |
| C3—C4—C5—C6 | −1.0 (3) | N2—C8—C9—C19 | −7.1 (2) |
| C2—C1—C6—C5 | 0.7 (2) | N1—C8—C9—C19 | 177.35 (15) |
| C2—C1—C6—C7 | −179.32 (15) | C9—N3—C10—O2 | 9.9 (3) |
| C4—C5—C6—C1 | −0.1 (2) | C9—N3—C10—O3 | −170.43 (13) |
| C4—C5—C6—C7 | 179.93 (15) | C11—O3—C10—O2 | 11.3 (2) |
| C8—N1—C7—O1 | −0.38 (18) | C11—O3—C10—N3 | −168.37 (12) |
| C8—N1—C7—C6 | −179.60 (15) | C10—O3—C11—C12 | 98.05 (16) |
| N2—O1—C7—N1 | 0.30 (18) | O3—C11—C12—C17 | −104.15 (17) |
| N2—O1—C7—C6 | 179.60 (13) | O3—C11—C12—C13 | 74.49 (18) |
| C1—C6—C7—N1 | 4.6 (2) | C17—C12—C13—C14 | 1.1 (2) |
| C5—C6—C7—N1 | −175.44 (16) | C11—C12—C13—C14 | −177.57 (16) |
| C1—C6—C7—O1 | −174.60 (14) | C12—C13—C14—C15 | −0.7 (3) |
| C5—C6—C7—O1 | 5.4 (2) | C13—C14—C15—C16 | −0.3 (3) |
| O1—N2—C8—N1 | −0.16 (18) | C14—C15—C16—C17 | 0.9 (3) |
| O1—N2—C8—C9 | −175.95 (14) | C13—C12—C17—C16 | −0.5 (2) |
| C7—N1—C8—N2 | 0.33 (19) | C11—C12—C17—C16 | 178.18 (15) |
| C7—N1—C8—C9 | 176.22 (14) | C15—C16—C17—C12 | −0.5 (3) |
| C10—N3—C9—C8 | 67.03 (18) |
| H··· | ||||
| N3—H1N3···N2i | 0.840 (16) | 2.428 (15) | 3.2492 (18) | 165.7 (14) |
| C16—H16A···Cg1ii | 0.93 | 2.91 | 3.6700 (18) | 140 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the C12–C17 ring.
| H⋯ | ||||
|---|---|---|---|---|
| N3—H1 | 0.840 (16) | 2.428 (15) | 3.2492 (18) | 165.7 (14) |
| C16—H16 | 0.93 | 2.91 | 3.6700 (18) | 140 |
Symmetry codes: (i) ; (ii) .