Literature DB >> 21523074

Ethyl 1-formamido-4-oxo-2,6-diphenyl-cyclo-hexa-necarboxyl-ate.

Dawei Zhang, Xianxiu Xu, Qun Liu.   

Abstract

In the title compound, C(22)H(23)NO(4), the central six-membered ring is in a twist-boat conformation, the two aryl groups are in equatorial positions and the dihedral angle between the two aromatic rings is 75.98 (12)°.

Entities:  

Year:  2011        PMID: 21523074      PMCID: PMC3051433          DOI: 10.1107/S1600536811000985

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis, see: Tan et al. (2009 ▶); Zhang et al. (2010 ▶). For related structures, see: Rowland & Gill (1988 ▶); Rowland et al. (1998 ▶); Aleman et al. (2009 ▶). Cyclic constrained analogues of phenyl­alanine (Phe) are of particular inter­est in the construction of peptide analogues with controlled folds in the backbone because they play an important role in both restricting the χ1 torsion angle and in peptide receptor recognition processes, see: Cativiela & Díaz-de-Villegas (1998 ▶, 2000 ▶, 2007 ▶); Cativiela & Ordóñez (2009 ▶); Lasa & Cativiela (2006 ▶).

Experimental

Crystal data

C22H23NO4 M = 365.41 Monoclinic, a = 11.3240 (12) Å b = 13.5100 (15) Å c = 12.5870 (14) Å β = 99.149 (2)° V = 1901.2 (4) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 293 K 0.21 × 0.16 × 0.14 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.982, T max = 0.988 11361 measured reflections 4439 independent reflections 3120 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.116 S = 1.02 4439 reflections 244 parameters H-atom parameters constrained Δρmax = 0.22 e Å−3 Δρmin = −0.19 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811000985/nc2214sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811000985/nc2214Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C22H23NO4F(000) = 776
Mr = 365.41Dx = 1.277 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71069 Å
a = 11.3240 (12) ÅCell parameters from 132 reflections
b = 13.5100 (15) Åθ = 1.3–26.0°
c = 12.5870 (14) ŵ = 0.09 mm1
β = 99.149 (2)°T = 293 K
V = 1901.2 (4) Å3Block, colorless
Z = 40.21 × 0.16 × 0.14 mm
Bruker SMART APEXII CCD area-detector diffractometer4439 independent reflections
Radiation source: fine-focus sealed tube3120 reflections with I > 2σ(I)
graphiteRint = 0.021
ω scansθmax = 28.3°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −15→14
Tmin = 0.982, Tmax = 0.988k = −16→17
11361 measured reflectionsl = −14→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.116H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0534P)2 + 0.306P] where P = (Fo2 + 2Fc2)/3
4439 reflections(Δ/σ)max < 0.001
244 parametersΔρmax = 0.22 e Å3
0 restraintsΔρmin = −0.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O21.03050 (10)0.14890 (8)0.47576 (8)0.0541 (3)
O10.94334 (8)0.26361 (7)0.36180 (7)0.0426 (2)
C190.98394 (11)0.17327 (10)0.38744 (10)0.0364 (3)
N11.01302 (10)0.00919 (8)0.33120 (9)0.0401 (3)
C80.95919 (11)0.10312 (9)0.29070 (10)0.0339 (3)
C10.75462 (12)0.08726 (11)0.35380 (11)0.0416 (3)
O40.95020 (11)−0.09967 (8)0.19437 (10)0.0637 (3)
O30.76178 (11)0.15572 (10)−0.01954 (9)0.0699 (4)
C70.81977 (11)0.09052 (10)0.25754 (10)0.0366 (3)
H70.80830.02510.22390.044*
C100.94777 (13)0.11160 (11)0.08583 (11)0.0443 (3)
H10A0.98700.13680.02830.053*
H10B0.94970.03990.08320.053*
C131.14993 (12)0.13184 (11)0.20876 (11)0.0408 (3)
C91.01555 (12)0.14705 (10)0.19429 (10)0.0378 (3)
H91.00310.21880.19610.045*
C120.76820 (13)0.16456 (11)0.17030 (11)0.0448 (3)
H12A0.68190.15790.15540.054*
H12B0.78700.23150.19550.054*
C200.94851 (15)0.33379 (11)0.45037 (13)0.0534 (4)
H20A1.03080.35160.47730.064*
H20B0.91370.30500.50880.064*
C110.81977 (13)0.14617 (11)0.06898 (11)0.0456 (3)
C181.20075 (13)0.04802 (12)0.17129 (12)0.0510 (4)
H181.15180.00000.13420.061*
C141.22578 (14)0.20301 (12)0.26263 (12)0.0496 (4)
H141.19360.26010.28780.060*
C20.70022 (14)0.16996 (13)0.38990 (13)0.0550 (4)
H20.70060.22950.35280.066*
C60.74950 (14)−0.00068 (14)0.40968 (14)0.0563 (4)
H60.7837−0.05760.38610.068*
C221.00363 (14)−0.07956 (11)0.28331 (14)0.0500 (4)
H221.0424−0.13180.32250.060*
C151.34882 (15)0.18981 (14)0.27916 (14)0.0610 (5)
H151.39850.23800.31520.073*
C171.32359 (15)0.03502 (15)0.18842 (14)0.0621 (5)
H171.3564−0.02180.16330.075*
C161.39736 (15)0.10596 (16)0.24257 (14)0.0648 (5)
H161.47980.09700.25420.078*
C30.64542 (17)0.16480 (18)0.48052 (17)0.0773 (6)
H30.61050.22120.50440.093*
C50.69387 (18)−0.00491 (19)0.50051 (17)0.0799 (6)
H50.6919−0.06420.53780.096*
C210.87950 (17)0.42237 (12)0.40695 (16)0.0659 (5)
H21A0.88030.47060.46310.099*
H21B0.79840.40360.38030.099*
H21C0.91510.45020.34940.099*
C40.64203 (19)0.0781 (2)0.53508 (17)0.0882 (7)
H40.60460.07530.59570.106*
H1N1.05240.01280.39390.106*
U11U22U33U12U13U23
O20.0651 (7)0.0600 (7)0.0331 (5)0.0161 (5)−0.0045 (5)−0.0018 (5)
O10.0489 (6)0.0382 (5)0.0375 (5)0.0043 (4)−0.0026 (4)−0.0064 (4)
C190.0337 (6)0.0409 (7)0.0339 (7)0.0032 (5)0.0027 (5)−0.0003 (5)
N10.0411 (6)0.0377 (6)0.0415 (6)0.0070 (5)0.0065 (5)0.0038 (5)
C80.0345 (6)0.0335 (6)0.0333 (7)0.0026 (5)0.0039 (5)0.0012 (5)
C10.0298 (6)0.0528 (8)0.0411 (8)0.0000 (6)0.0021 (5)0.0003 (6)
O40.0742 (8)0.0462 (6)0.0687 (8)0.0036 (5)0.0055 (6)−0.0131 (6)
O30.0697 (8)0.0954 (9)0.0387 (6)0.0093 (7)−0.0093 (5)0.0077 (6)
C70.0346 (7)0.0372 (7)0.0367 (7)−0.0003 (5)0.0015 (5)−0.0011 (5)
C100.0484 (8)0.0517 (8)0.0321 (7)−0.0063 (6)0.0044 (6)−0.0016 (6)
C130.0413 (7)0.0501 (8)0.0318 (7)−0.0082 (6)0.0078 (5)0.0002 (6)
C90.0419 (7)0.0388 (7)0.0323 (7)−0.0032 (6)0.0052 (5)−0.0006 (5)
C120.0406 (7)0.0484 (8)0.0424 (8)0.0039 (6)−0.0030 (6)0.0016 (6)
C200.0587 (9)0.0488 (9)0.0482 (9)0.0065 (7)−0.0051 (7)−0.0169 (7)
C110.0518 (8)0.0444 (8)0.0374 (8)−0.0036 (6)−0.0032 (6)0.0040 (6)
C180.0436 (8)0.0646 (10)0.0463 (8)−0.0092 (7)0.0120 (7)−0.0124 (7)
C140.0524 (9)0.0514 (9)0.0445 (8)−0.0142 (7)0.0065 (7)−0.0011 (7)
C20.0445 (8)0.0649 (10)0.0566 (10)0.0045 (7)0.0109 (7)−0.0073 (8)
C60.0443 (8)0.0663 (10)0.0599 (10)0.0038 (7)0.0127 (7)0.0158 (8)
C220.0538 (9)0.0384 (8)0.0602 (10)0.0095 (6)0.0166 (8)0.0050 (7)
C150.0517 (9)0.0753 (12)0.0542 (10)−0.0266 (9)0.0026 (8)0.0007 (9)
C170.0460 (9)0.0851 (13)0.0588 (10)−0.0002 (8)0.0195 (8)−0.0123 (9)
C160.0389 (8)0.0963 (14)0.0615 (11)−0.0126 (9)0.0150 (8)−0.0043 (10)
C30.0604 (11)0.1077 (17)0.0673 (12)0.0159 (11)0.0212 (9)−0.0169 (12)
C50.0580 (11)0.1129 (17)0.0710 (13)0.0032 (11)0.0172 (10)0.0370 (12)
C210.0682 (11)0.0490 (10)0.0774 (12)0.0083 (8)0.0022 (9)−0.0117 (8)
C40.0616 (12)0.148 (2)0.0601 (12)0.0153 (13)0.0267 (10)0.0114 (14)
O2—C191.1983 (15)C12—H12B0.9700
O1—C191.3258 (16)C20—C211.485 (2)
O1—C201.4575 (16)C20—H20A0.9700
C19—C81.5333 (18)C20—H20B0.9700
N1—C221.3386 (19)C18—C171.384 (2)
N1—C81.4639 (16)C18—H180.9300
N1—H1N0.8440C14—C151.387 (2)
C8—C91.5744 (18)C14—H140.9300
C8—C71.5768 (17)C2—C31.384 (3)
C1—C61.387 (2)C2—H20.9300
C1—C21.387 (2)C6—C51.391 (3)
C1—C71.5161 (19)C6—H60.9300
O4—C221.2157 (19)C22—H220.9300
O3—C111.2070 (17)C15—C161.370 (3)
C7—C121.5308 (18)C15—H150.9300
C7—H70.9800C17—C161.378 (2)
C10—C111.505 (2)C17—H170.9300
C10—C91.5326 (18)C16—H160.9300
C10—H10A0.9700C3—C41.361 (3)
C10—H10B0.9700C3—H30.9300
C13—C181.386 (2)C5—C41.369 (3)
C13—C141.392 (2)C5—H50.9300
C13—C91.5176 (19)C21—H21A0.9600
C9—H90.9800C21—H21B0.9600
C12—C111.505 (2)C21—H21C0.9600
C12—H12A0.9700C4—H40.9300
C19—O1—C20116.26 (10)O1—C20—H20B110.4
O2—C19—O1124.27 (12)C21—C20—H20B110.4
O2—C19—C8124.39 (12)H20A—C20—H20B108.6
O1—C19—C8111.30 (10)O3—C11—C12122.48 (14)
C22—N1—C8128.38 (12)O3—C11—C10122.25 (14)
C22—N1—H1N117.8C12—C11—C10115.24 (12)
C8—N1—H1N113.8C17—C18—C13120.78 (15)
N1—C8—C19104.24 (10)C17—C18—H18119.6
N1—C8—C9113.44 (11)C13—C18—H18119.6
C19—C8—C9109.50 (10)C15—C14—C13120.78 (16)
N1—C8—C7110.03 (10)C15—C14—H14119.6
C19—C8—C7109.02 (10)C13—C14—H14119.6
C9—C8—C7110.37 (10)C3—C2—C1120.67 (18)
C6—C1—C2117.88 (15)C3—C2—H2119.7
C6—C1—C7119.68 (13)C1—C2—H2119.7
C2—C1—C7122.44 (13)C1—C6—C5120.85 (18)
C1—C7—C12114.43 (11)C1—C6—H6119.6
C1—C7—C8112.68 (10)C5—C6—H6119.6
C12—C7—C8111.78 (11)O4—C22—N1127.38 (14)
C1—C7—H7105.7O4—C22—H22116.3
C12—C7—H7105.7N1—C22—H22116.3
C8—C7—H7105.7C16—C15—C14120.19 (15)
C11—C10—C9111.29 (12)C16—C15—H15119.9
C11—C10—H10A109.4C14—C15—H15119.9
C9—C10—H10A109.4C16—C17—C18120.25 (17)
C11—C10—H10B109.4C16—C17—H17119.9
C9—C10—H10B109.4C18—C17—H17119.9
H10A—C10—H10B108.0C15—C16—C17119.80 (16)
C18—C13—C14118.20 (14)C15—C16—H16120.1
C18—C13—C9122.16 (12)C17—C16—H16120.1
C14—C13—C9119.63 (13)C4—C3—C2120.76 (19)
C13—C9—C10114.53 (11)C4—C3—H3119.6
C13—C9—C8112.22 (11)C2—C3—H3119.6
C10—C9—C8111.21 (11)C4—C5—C6120.05 (19)
C13—C9—H9106.1C4—C5—H5120.0
C10—C9—H9106.1C6—C5—H5120.0
C8—C9—H9106.1C20—C21—H21A109.5
C11—C12—C7110.16 (12)C20—C21—H21B109.5
C11—C12—H12A109.6H21A—C21—H21B109.5
C7—C12—H12A109.6C20—C21—H21C109.5
C11—C12—H12B109.6H21A—C21—H21C109.5
C7—C12—H12B109.6H21B—C21—H21C109.5
H12A—C12—H12B108.1C3—C4—C5119.78 (19)
O1—C20—C21106.74 (12)C3—C4—H4120.1
O1—C20—H20A110.4C5—C4—H4120.1
C21—C20—H20A110.4
C20—O1—C19—O2−5.0 (2)C7—C8—C9—C13−162.62 (11)
C20—O1—C19—C8172.73 (12)N1—C8—C9—C1091.15 (13)
C22—N1—C8—C19170.75 (13)C19—C8—C9—C10−152.88 (11)
C22—N1—C8—C9−70.21 (17)C7—C8—C9—C10−32.86 (15)
C22—N1—C8—C753.98 (18)C1—C7—C12—C11−167.17 (11)
O2—C19—C8—N1−4.36 (18)C8—C7—C12—C1163.22 (14)
O1—C19—C8—N1177.89 (10)C19—O1—C20—C21−169.98 (13)
O2—C19—C8—C9−126.04 (14)C7—C12—C11—O3143.48 (15)
O1—C19—C8—C956.21 (14)C7—C12—C11—C10−34.51 (16)
O2—C19—C8—C7113.11 (14)C9—C10—C11—O3155.50 (14)
O1—C19—C8—C7−64.64 (14)C9—C10—C11—C12−26.50 (17)
C6—C1—C7—C12148.86 (13)C14—C13—C18—C170.9 (2)
C2—C1—C7—C12−31.95 (18)C9—C13—C18—C17−178.16 (15)
C6—C1—C7—C8−81.98 (16)C18—C13—C14—C15−0.6 (2)
C2—C1—C7—C897.21 (15)C9—C13—C14—C15178.47 (14)
N1—C8—C7—C176.19 (13)C6—C1—C2—C31.6 (2)
C19—C8—C7—C1−37.55 (14)C7—C1—C2—C3−177.59 (14)
C9—C8—C7—C1−157.86 (11)C2—C1—C6—C5−1.5 (2)
N1—C8—C7—C12−153.29 (11)C7—C1—C6—C5177.76 (15)
C19—C8—C7—C1292.97 (13)C8—N1—C22—O42.0 (3)
C9—C8—C7—C12−27.35 (14)C13—C14—C15—C16−0.1 (2)
C18—C13—C9—C10−38.46 (19)C13—C18—C17—C16−0.5 (3)
C14—C13—C9—C10142.52 (14)C14—C15—C16—C170.5 (3)
C18—C13—C9—C889.57 (16)C18—C17—C16—C15−0.3 (3)
C14—C13—C9—C8−89.45 (15)C1—C2—C3—C4−1.1 (3)
C11—C10—C9—C13−169.26 (12)C1—C6—C5—C40.8 (3)
C11—C10—C9—C862.20 (15)C2—C3—C4—C50.4 (3)
N1—C8—C9—C13−38.62 (15)C6—C5—C4—C3−0.2 (3)
C19—C8—C9—C1377.35 (13)
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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Recent Progress on the Stereoselective Synthesis of Cyclic Quaternary alpha-Amino Acids.

Authors:  Carlos Cativiela; Mario Ordóñez
Journal:  Tetrahedron Asymmetry       Date:  2009-01-30

3.  Tandem double-Michael-addition/cyclization/acyl migration of 1,4-dien-3-ones and ethyl isocyanoacetate: stereoselective synthesis of pyrrolizidines.

Authors:  Jing Tan; Xianxiu Xu; Lingjuan Zhang; Yifei Li; Qun Liu
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

4.  Conformational preferences of 1-amino-2-phenylcyclohexanecarboxylic acid, a phenylalanine cyclohexane analogue.

Authors:  Carlos Alemán; Ana I Jiménez; Carlos Cativiela; Ruth Nussinov; Jordi Casanovas
Journal:  J Org Chem       Date:  2009-10-16       Impact factor: 4.354

  4 in total

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