Literature DB >> 21523057

1,1'-[4-(2,4-Dichloro-phen-yl)-2,6-di-methyl-1,4-di-hydro-pyridine-3,5-di-yl]diethanone.

J Kalyana Sundar, B Palakshi Reddy, V Vijayakumar, S Natarajan, J Suresh, P L Nilantha Lakshman.   

Abstract

In the title compound, C(17)H(17)Cl(2)NO(2), the central 1,4-dihydro-pyridine ring adopts a flattened-boat conformation. The ethanone substituents of the dihydro-pyridine ring at positions 3 and 5 have synperiplanar (cis) or anti-periplanar (trans) conformations with respect to the adjacent C=C bonds in the dihydro-pyridine ring. The 2,4-dichloro-phenyl ring is almost planar [r.m.s. deviation = 0.0045 (1) Å] and almost perpendicular [89.27 (3)°] to the mean plane of the dihydro-pyridine ring. In the crystal, an N-H⋯O hydrogen bond links mol-ecules into a zigzag chain along the ac diagonal. C-H⋯Cl contacts form centrosymmetric dimers and additional weak C-H⋯O contacts further consolidate the packing.

Entities:  

Year:  2011        PMID: 21523057      PMCID: PMC3051630          DOI: 10.1107/S1600536810052839

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the pharmaceutical applications of 1,4-dihydro­pyridine derivatives, see: Rose (1989 ▶, 1990 ▶); Salehi & Guo (2004 ▶). For structure–activity relationships among 1,4-dihydro­pyridines, see: Triggle et al. (1980 ▶); Janis & Triggle (1984 ▶); Langs & Triggle (1985 ▶).

Experimental

Crystal data

C17H17Cl2NO2 M = 338.22 Monoclinic, a = 10.307 (4) Å b = 13.745 (3) Å c = 11.312 (2) Å β = 93.80 (2)° V = 1599.0 (8) Å3 Z = 4 Mo Kα radiation μ = 0.41 mm−1 T = 293 K 0.23 × 0.21 × 0.18 mm

Data collection

Nonius MACH3 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.910, T max = 0.929 3247 measured reflections 2811 independent reflections 2265 reflections with I > 2σ(I) R int = 0.014 3 standard reflections every 60 min intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.096 S = 1.05 2811 reflections 207 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.21 e Å−3 Δρmin = −0.21 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1996 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810052839/sj5076sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810052839/sj5076Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H17Cl2NO2F(000) = 704
Mr = 338.22Dx = 1.405 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 25 reflections
a = 10.307 (4) Åθ = 2–25°
b = 13.745 (3) ŵ = 0.41 mm1
c = 11.312 (2) ÅT = 293 K
β = 93.80 (2)°Block, colourless
V = 1599.0 (8) Å30.23 × 0.21 × 0.18 mm
Z = 4
Nonius MACH3 diffractometer2265 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.014
graphiteθmax = 25.0°, θmin = 2.3°
ω–2θ scansh = 0→12
Absorption correction: ψ scan (North et al., 1968)k = −1→16
Tmin = 0.910, Tmax = 0.929l = −13→13
3247 measured reflections3 standard reflections every 60 min
2811 independent reflections intensity decay: none
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.096H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0451P)2 + 0.6776P] where P = (Fo2 + 2Fc2)/3
2811 reflections(Δ/σ)max < 0.001
207 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.21 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C20.09331 (17)0.23909 (14)0.35680 (16)0.0368 (4)
C30.21210 (16)0.23609 (13)0.41766 (15)0.0333 (4)
C40.32545 (16)0.18638 (13)0.36213 (15)0.0325 (4)
H40.37700.15170.42470.039*
C50.27979 (18)0.11313 (13)0.26722 (15)0.0371 (4)
C60.16077 (19)0.12296 (14)0.21010 (16)0.0405 (4)
C70.1058 (2)0.06292 (16)0.1077 (2)0.0573 (6)
H7A0.01300.07060.09980.069*
H7B0.1267−0.00430.12160.069*
H7C0.14240.08410.03620.069*
C8−0.02898 (18)0.28757 (18)0.3917 (2)0.0536 (6)
H8A−0.09610.27970.32950.064*
H8B−0.01280.35560.40500.064*
H8C−0.05620.25840.46310.064*
C90.24581 (18)0.28036 (14)0.53385 (16)0.0388 (4)
C100.1592 (2)0.34902 (17)0.59460 (18)0.0538 (6)
H10A0.20280.37110.66730.065*
H10B0.08030.31620.61140.065*
H10C0.13900.40380.54400.065*
C110.3678 (2)0.03428 (15)0.23582 (19)0.0485 (5)
C120.4571 (3)−0.00851 (18)0.3312 (2)0.0695 (7)
H12A0.4768−0.07450.31140.083*
H12B0.4159−0.00720.40490.083*
H12C0.53600.02870.33890.083*
C130.41271 (16)0.26267 (13)0.30834 (15)0.0313 (4)
C140.54362 (16)0.27779 (13)0.34248 (15)0.0348 (4)
C150.61739 (18)0.34868 (15)0.29079 (17)0.0422 (5)
H150.70410.35800.31660.051*
C160.56114 (19)0.40453 (15)0.20163 (17)0.0446 (5)
C170.4322 (2)0.39221 (15)0.16311 (17)0.0457 (5)
H170.39430.43020.10220.055*
C180.36099 (18)0.32216 (14)0.21721 (16)0.0394 (4)
H180.27400.31420.19160.047*
Cl10.62411 (4)0.20669 (4)0.45204 (5)0.05059 (17)
Cl20.65383 (6)0.49418 (5)0.13777 (6)0.0727 (2)
N10.07592 (16)0.19087 (13)0.25047 (15)0.0438 (4)
O10.35315 (14)0.26245 (14)0.58271 (14)0.0638 (5)
O20.3688 (2)0.00154 (15)0.13564 (16)0.0885 (7)
H10.006 (2)0.1959 (17)0.213 (2)0.053 (7)*
U11U22U33U12U13U23
C20.0286 (9)0.0424 (10)0.0386 (10)−0.0049 (8)−0.0028 (7)0.0092 (8)
C30.0286 (9)0.0395 (10)0.0314 (9)−0.0029 (7)−0.0007 (7)0.0038 (7)
C40.0304 (9)0.0363 (9)0.0297 (9)−0.0005 (7)−0.0065 (7)0.0013 (7)
C50.0417 (10)0.0348 (10)0.0339 (9)−0.0050 (8)−0.0049 (8)0.0011 (8)
C60.0483 (11)0.0366 (10)0.0351 (10)−0.0091 (9)−0.0095 (8)0.0048 (8)
C70.0707 (15)0.0496 (13)0.0480 (12)−0.0153 (11)−0.0231 (11)−0.0001 (10)
C80.0283 (10)0.0693 (15)0.0624 (13)0.0005 (10)−0.0016 (9)0.0081 (11)
C90.0347 (10)0.0472 (11)0.0345 (9)−0.0049 (8)0.0019 (8)0.0016 (8)
C100.0600 (13)0.0636 (14)0.0379 (11)0.0095 (11)0.0043 (9)−0.0027 (10)
C110.0546 (12)0.0396 (11)0.0503 (12)−0.0021 (9)−0.0034 (9)−0.0076 (9)
C120.0770 (17)0.0506 (14)0.0778 (17)0.0214 (12)−0.0178 (14)−0.0106 (12)
C130.0282 (9)0.0359 (9)0.0295 (8)0.0005 (7)−0.0009 (7)−0.0063 (7)
C140.0294 (9)0.0392 (10)0.0351 (9)0.0036 (7)−0.0025 (7)−0.0043 (8)
C150.0290 (9)0.0505 (12)0.0469 (11)−0.0040 (8)0.0010 (8)−0.0042 (9)
C160.0454 (11)0.0459 (11)0.0431 (11)−0.0097 (9)0.0076 (9)−0.0009 (9)
C170.0492 (11)0.0492 (12)0.0377 (10)−0.0045 (9)−0.0051 (9)0.0058 (9)
C180.0333 (9)0.0474 (11)0.0365 (10)−0.0038 (8)−0.0060 (8)−0.0003 (8)
Cl10.0328 (3)0.0580 (3)0.0589 (3)0.0034 (2)−0.0119 (2)0.0099 (2)
Cl20.0696 (4)0.0779 (5)0.0706 (4)−0.0307 (3)0.0044 (3)0.0198 (3)
N10.0329 (9)0.0529 (10)0.0431 (9)−0.0060 (7)−0.0163 (7)0.0043 (8)
O10.0408 (8)0.0997 (13)0.0485 (9)0.0097 (8)−0.0152 (7)−0.0258 (9)
O20.1091 (16)0.0922 (15)0.0621 (11)0.0329 (12)−0.0095 (10)−0.0350 (10)
C2—C31.365 (2)C10—H10A0.9600
C2—N11.375 (3)C10—H10B0.9600
C2—C81.502 (3)C10—H10C0.9600
C3—C91.469 (3)C11—O21.220 (3)
C3—C41.524 (2)C11—C121.492 (3)
C4—C51.524 (2)C12—H12A0.9600
C4—C131.533 (2)C12—H12B0.9600
C4—H40.9800C12—H12C0.9600
C5—C61.355 (3)C13—C181.394 (3)
C5—C111.472 (3)C13—C141.394 (2)
C6—N11.378 (3)C14—C151.389 (3)
C6—C71.503 (3)C14—Cl11.7444 (18)
C7—H7A0.9600C15—C161.366 (3)
C7—H7B0.9600C15—H150.9300
C7—H7C0.9600C16—C171.382 (3)
C8—H8A0.9600C16—Cl21.745 (2)
C8—H8B0.9600C17—C181.378 (3)
C8—H8C0.9600C17—H170.9300
C9—O11.228 (2)C18—H180.9300
C9—C101.497 (3)N1—H10.81 (2)
C3—C2—N1119.17 (17)H10A—C10—H10B109.5
C3—C2—C8128.40 (18)C9—C10—H10C109.5
N1—C2—C8112.41 (16)H10A—C10—H10C109.5
C2—C3—C9126.14 (17)H10B—C10—H10C109.5
C2—C3—C4119.48 (16)O2—C11—C5122.6 (2)
C9—C3—C4114.33 (15)O2—C11—C12118.9 (2)
C5—C4—C3112.16 (14)C5—C11—C12118.43 (18)
C5—C4—C13109.52 (14)C11—C12—H12A109.5
C3—C4—C13110.04 (14)C11—C12—H12B109.5
C5—C4—H4108.3H12A—C12—H12B109.5
C3—C4—H4108.3C11—C12—H12C109.5
C13—C4—H4108.3H12A—C12—H12C109.5
C6—C5—C11120.76 (17)H12B—C12—H12C109.5
C6—C5—C4119.86 (17)C18—C13—C14115.67 (16)
C11—C5—C4119.35 (16)C18—C13—C4119.28 (15)
C5—C6—N1118.96 (17)C14—C13—C4125.05 (16)
C5—C6—C7126.61 (19)C15—C14—C13122.33 (17)
N1—C6—C7114.35 (18)C15—C14—Cl1116.38 (13)
C6—C7—H7A109.5C13—C14—Cl1121.28 (14)
C6—C7—H7B109.5C16—C15—C14119.20 (17)
H7A—C7—H7B109.5C16—C15—H15120.4
C6—C7—H7C109.5C14—C15—H15120.4
H7A—C7—H7C109.5C15—C16—C17121.10 (18)
H7B—C7—H7C109.5C15—C16—Cl2119.04 (15)
C2—C8—H8A109.5C17—C16—Cl2119.85 (16)
C2—C8—H8B109.5C18—C17—C16118.35 (18)
H8A—C8—H8B109.5C18—C17—H17120.8
C2—C8—H8C109.5C16—C17—H17120.8
H8A—C8—H8C109.5C17—C18—C13123.34 (17)
H8B—C8—H8C109.5C17—C18—H18118.3
O1—C9—C3118.17 (17)C13—C18—H18118.3
O1—C9—C10117.81 (17)C2—N1—C6124.61 (16)
C3—C9—C10123.98 (17)C2—N1—H1118.2 (16)
C9—C10—H10A109.5C6—N1—H1116.5 (16)
C9—C10—H10B109.5
N1—C2—C3—C9−177.66 (17)C4—C5—C11—C1234.8 (3)
C8—C2—C3—C90.5 (3)C5—C4—C13—C1862.3 (2)
N1—C2—C3—C44.8 (3)C3—C4—C13—C18−61.4 (2)
C8—C2—C3—C4−177.01 (18)C5—C4—C13—C14−116.97 (18)
C2—C3—C4—C5−22.3 (2)C3—C4—C13—C14119.30 (18)
C9—C3—C4—C5159.92 (15)C18—C13—C14—C151.2 (3)
C2—C3—C4—C1399.89 (18)C4—C13—C14—C15−179.54 (16)
C9—C3—C4—C13−77.89 (18)C18—C13—C14—Cl1−177.96 (13)
C3—C4—C5—C624.6 (2)C4—C13—C14—Cl11.3 (2)
C13—C4—C5—C6−97.9 (2)C13—C14—C15—C16−1.4 (3)
C3—C4—C5—C11−157.55 (16)Cl1—C14—C15—C16177.78 (15)
C13—C4—C5—C1180.0 (2)C14—C15—C16—C170.6 (3)
C11—C5—C6—N1173.01 (18)C14—C15—C16—Cl2179.48 (15)
C4—C5—C6—N1−9.1 (3)C15—C16—C17—C180.2 (3)
C11—C5—C6—C7−3.6 (3)Cl2—C16—C17—C18−178.61 (16)
C4—C5—C6—C7174.23 (18)C16—C17—C18—C13−0.4 (3)
C2—C3—C9—O1172.37 (19)C14—C13—C18—C17−0.3 (3)
C4—C3—C9—O1−10.0 (3)C4—C13—C18—C17−179.59 (18)
C2—C3—C9—C10−10.0 (3)C3—C2—N1—C613.8 (3)
C4—C3—C9—C10167.64 (18)C8—C2—N1—C6−164.67 (18)
C6—C5—C11—O231.2 (3)C5—C6—N1—C2−11.5 (3)
C4—C5—C11—O2−146.6 (2)C7—C6—N1—C2165.50 (18)
C6—C5—C11—C12−147.4 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.81 (2)2.16 (2)2.951 (2)163 (2)
C8—H8B···O2ii0.962.563.397 (3)147
C10—H10C···O2ii0.962.433.341 (3)158
C4—H4···Cl10.982.653.190 (2)115
C17—H17···Cl2iii0.93 (1)2.92 (1)3.796 (2)158.(1)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O1i0.81 (2)2.16 (2)2.951 (2)163 (2)
C8—H8B⋯O2ii0.962.563.397 (3)147
C10—H10C⋯O2ii0.962.433.341 (3)158
C17—H17⋯Cl2iii0.93 (1)2.92 (1)3.796 (2)158 (1)

Symmetry codes: (i) ; (ii) ; (iii) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Conformational features of calcium channel agonist and antagonist analogs of nifedipine.

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3.  [Calcium modulators of the anellated dihydropyridine type. Synthesis and pharmacologic action].

Authors:  U Rose
Journal:  Arzneimittelforschung       Date:  1989-11

4.  [Hexahydroquinolinones with calcium-modulatory effects--synthesis and pharmacologic action].

Authors:  U Rose
Journal:  Arch Pharm (Weinheim)       Date:  1990-05       Impact factor: 3.751

5.  Crystal structures of calcium channel antagonists: 2,6-dimethyl-3,5-dicarbomethoxy-4-[2-nitro-, 3-cyano-, 4-(dimethylamino)-, and 2,3,4,5,6-pentafluorophenyl]-1,4-dihydropyridine.

Authors:  A M Triggle; E Shefter; D J Triggle
Journal:  J Med Chem       Date:  1980-12       Impact factor: 7.446

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total

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