| Literature DB >> 21522944 |
Jia Jia1.
Abstract
The title hydrated molecular salt, 2C(12)H(9)N(2) (+)·C(14)H(6)O(8)S(2) (2-)·6H(2)O, consists of 1,10-phenanthrolinium (phen-H(+)) cations, anthraquinone-1,5-disulfonate (AQDS(2-)) anions, which occupy a centre of inversion, and water molecules of crystal-lization. In the crystal, a supra-molecular network structure is formed via N-H⋯O and O-H⋯O hydrogen bonds and weak C-H⋯O and π-π stacking inter-actions [centroid-centroid distances = 3.651 (6) and 3.545 (8) Å].Entities:
Year: 2011 PMID: 21522944 PMCID: PMC3051516 DOI: 10.1107/S1600536810053456
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| 2C12H9N2+·C14H6O8S22−·6H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 3063 reflections | |
| θ = 2.4–27.6° | |
| µ = 0.22 mm−1 | |
| α = 111.591 (1)° | |
| β = 98.848 (1)° | Block, yellow |
| γ = 111.234 (1)° | 0.24 × 0.22 × 0.20 mm |
| Bruker APEXII CCD area-detector diffractometer | 3499 independent reflections |
| Radiation source: fine-focus sealed tube | 2964 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.7°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 5035 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3499 reflections | (Δ/σ)max < 0.001 |
| 265 parameters | Δρmax = 0.42 e Å−3 |
| 0 restraints | Δρmin = −0.39 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| N1 | 0.7261 (2) | 0.6318 (3) | 0.6490 (2) | 0.0508 (5) | |
| H1A | 0.777 (3) | 0.583 (3) | 0.616 (3) | 0.061* | |
| N2 | 0.7525 (2) | 0.5796 (3) | 0.3953 (2) | 0.0529 (5) | |
| C1 | 0.6554 (3) | 0.6801 (3) | 0.5725 (3) | 0.0473 (6) | |
| C2 | 0.7199 (3) | 0.6540 (3) | 0.7734 (3) | 0.0614 (7) | |
| H2A | 0.7702 | 0.6189 | 0.8220 | 0.074* | |
| C3 | 0.6388 (4) | 0.7293 (4) | 0.8305 (3) | 0.0678 (8) | |
| H3A | 0.6351 | 0.7461 | 0.9179 | 0.081* | |
| C4 | 0.5642 (3) | 0.7788 (3) | 0.7575 (3) | 0.0654 (8) | |
| H4A | 0.5086 | 0.8285 | 0.7953 | 0.078* | |
| C5 | 0.5701 (3) | 0.7558 (3) | 0.6260 (3) | 0.0547 (7) | |
| C6 | 0.4937 (3) | 0.8035 (3) | 0.5441 (4) | 0.0657 (8) | |
| H6 | 0.4366 | 0.8533 | 0.5779 | 0.079* | |
| C7 | 0.5030 (3) | 0.7776 (3) | 0.4189 (4) | 0.0661 (8) | |
| H7 | 0.4522 | 0.8101 | 0.3678 | 0.079* | |
| C8 | 0.5896 (3) | 0.7008 (3) | 0.3618 (3) | 0.0536 (7) | |
| C9 | 0.6022 (3) | 0.6695 (3) | 0.2310 (3) | 0.0643 (8) | |
| H9A | 0.5532 | 0.6992 | 0.1756 | 0.077* | |
| C10 | 0.6866 (4) | 0.5954 (4) | 0.1856 (3) | 0.0652 (8) | |
| H10A | 0.6953 | 0.5735 | 0.0990 | 0.078* | |
| C11 | 0.7599 (3) | 0.5531 (4) | 0.2714 (3) | 0.0610 (7) | |
| H11A | 0.8174 | 0.5030 | 0.2392 | 0.073* | |
| C12 | 0.6670 (3) | 0.6521 (3) | 0.4392 (3) | 0.0469 (6) | |
| S1 | 0.78814 (8) | 0.11641 (9) | 0.22241 (7) | 0.05292 (19) | |
| O1 | 0.6380 (2) | 0.0104 (3) | 0.2065 (3) | 0.0829 (7) | |
| O2 | 0.8478 (2) | 0.2720 (2) | 0.3366 (2) | 0.0633 (5) | |
| O3 | 0.8023 (3) | 0.1250 (4) | 0.0977 (2) | 0.1002 (9) | |
| O4 | 0.7954 (2) | 0.1068 (3) | 0.4845 (2) | 0.0661 (6) | |
| C13 | 0.9069 (3) | 0.0280 (3) | 0.2540 (2) | 0.0395 (5) | |
| C14 | 0.9501 (2) | 0.0149 (3) | 0.3743 (2) | 0.0346 (5) | |
| C15 | 0.8932 (3) | 0.0643 (3) | 0.4908 (2) | 0.0383 (5) | |
| C16 | 1.0474 (2) | −0.0535 (3) | 0.3832 (2) | 0.0365 (5) | |
| C17 | 1.0957 (3) | −0.1127 (3) | 0.2735 (3) | 0.0506 (6) | |
| H17 | 1.1599 | −0.1583 | 0.2805 | 0.061* | |
| C18 | 1.0489 (3) | −0.1042 (4) | 0.1554 (3) | 0.0602 (8) | |
| H18 | 1.0788 | −0.1465 | 0.0812 | 0.072* | |
| C19 | 0.9570 (3) | −0.0324 (3) | 0.1471 (3) | 0.0524 (6) | |
| H19 | 0.9281 | −0.0245 | 0.0674 | 0.063* | |
| O5 | 0.8925 (2) | 0.4707 (2) | 0.6231 (2) | 0.0661 (6) | |
| H5A | 0.9758 | 0.5440 | 0.6439 | 0.099* | |
| H5B | 0.8657 | 0.3892 | 0.5524 | 0.099* | |
| O6 | 0.6538 (3) | 0.2203 (3) | 0.9409 (3) | 0.1278 (13) | |
| H6A | 0.6893 | 0.1913 | 0.9919 | 0.192* | |
| H6B | 0.5678 | 0.1470 | 0.9015 | 0.192* | |
| O7 | 0.8515 (4) | 0.4711 (3) | 0.9125 (3) | 0.1289 (12) | |
| H7A | 0.7860 | 0.3911 | 0.9080 | 0.193* | |
| H7B | 0.9314 | 0.4878 | 0.9619 | 0.193* | 0.50 |
| H7C | 0.8613 | 0.4715 | 0.8406 | 0.193* | 0.50 |
| N1 | 0.0456 (13) | 0.0436 (12) | 0.0565 (14) | 0.0198 (10) | 0.0116 (10) | 0.0190 (11) |
| N2 | 0.0491 (13) | 0.0509 (13) | 0.0583 (14) | 0.0265 (11) | 0.0134 (11) | 0.0228 (11) |
| C1 | 0.0359 (13) | 0.0337 (12) | 0.0602 (16) | 0.0118 (10) | 0.0078 (11) | 0.0169 (12) |
| C2 | 0.0577 (18) | 0.0542 (17) | 0.0579 (18) | 0.0174 (14) | 0.0096 (14) | 0.0233 (14) |
| C3 | 0.0648 (19) | 0.0566 (18) | 0.0622 (19) | 0.0178 (16) | 0.0222 (16) | 0.0171 (15) |
| C4 | 0.0542 (17) | 0.0481 (16) | 0.077 (2) | 0.0190 (14) | 0.0266 (16) | 0.0151 (15) |
| C5 | 0.0419 (14) | 0.0389 (14) | 0.0711 (19) | 0.0155 (12) | 0.0154 (13) | 0.0173 (13) |
| C6 | 0.0515 (17) | 0.0521 (17) | 0.094 (2) | 0.0305 (14) | 0.0218 (16) | 0.0285 (17) |
| C7 | 0.0518 (17) | 0.0539 (17) | 0.095 (2) | 0.0287 (14) | 0.0111 (16) | 0.0376 (17) |
| C8 | 0.0426 (14) | 0.0402 (14) | 0.0718 (19) | 0.0154 (12) | 0.0078 (13) | 0.0275 (13) |
| C9 | 0.0605 (18) | 0.0559 (17) | 0.076 (2) | 0.0212 (15) | 0.0093 (15) | 0.0398 (16) |
| C10 | 0.0660 (19) | 0.0627 (19) | 0.0659 (19) | 0.0239 (16) | 0.0191 (15) | 0.0350 (16) |
| C11 | 0.0562 (17) | 0.0614 (18) | 0.0654 (19) | 0.0291 (15) | 0.0193 (14) | 0.0271 (15) |
| C12 | 0.0368 (13) | 0.0355 (13) | 0.0595 (16) | 0.0132 (11) | 0.0079 (11) | 0.0196 (12) |
| S1 | 0.0617 (4) | 0.0595 (4) | 0.0475 (4) | 0.0369 (4) | 0.0117 (3) | 0.0279 (3) |
| O1 | 0.0439 (12) | 0.0733 (15) | 0.1110 (19) | 0.0275 (11) | 0.0012 (12) | 0.0309 (14) |
| O2 | 0.0819 (14) | 0.0497 (11) | 0.0684 (13) | 0.0355 (11) | 0.0266 (11) | 0.0308 (10) |
| O3 | 0.161 (3) | 0.153 (3) | 0.0635 (14) | 0.122 (2) | 0.0502 (16) | 0.0712 (16) |
| O4 | 0.0783 (14) | 0.1073 (17) | 0.0764 (14) | 0.0750 (14) | 0.0483 (12) | 0.0644 (13) |
| C13 | 0.0372 (12) | 0.0404 (12) | 0.0392 (12) | 0.0173 (10) | 0.0100 (10) | 0.0182 (10) |
| C14 | 0.0320 (11) | 0.0330 (11) | 0.0369 (12) | 0.0143 (9) | 0.0106 (9) | 0.0151 (9) |
| C15 | 0.0385 (12) | 0.0396 (12) | 0.0464 (13) | 0.0227 (10) | 0.0181 (10) | 0.0229 (11) |
| C16 | 0.0356 (12) | 0.0370 (12) | 0.0375 (12) | 0.0179 (10) | 0.0138 (9) | 0.0160 (10) |
| C17 | 0.0522 (15) | 0.0625 (17) | 0.0479 (15) | 0.0370 (14) | 0.0225 (12) | 0.0228 (13) |
| C18 | 0.0671 (19) | 0.083 (2) | 0.0429 (15) | 0.0455 (17) | 0.0283 (14) | 0.0256 (15) |
| C19 | 0.0560 (16) | 0.0664 (18) | 0.0388 (13) | 0.0302 (14) | 0.0160 (12) | 0.0258 (13) |
| O5 | 0.0582 (12) | 0.0608 (12) | 0.0744 (14) | 0.0309 (10) | 0.0177 (10) | 0.0243 (11) |
| O6 | 0.0916 (19) | 0.0847 (18) | 0.170 (3) | 0.0179 (15) | −0.0330 (19) | 0.074 (2) |
| O7 | 0.123 (2) | 0.091 (2) | 0.150 (3) | 0.0416 (19) | −0.005 (2) | 0.061 (2) |
| N1—C2 | 1.330 (4) | S1—O1 | 1.439 (2) |
| N1—C1 | 1.359 (3) | S1—O2 | 1.443 (2) |
| N1—H1A | 0.87 (3) | S1—O3 | 1.445 (2) |
| N2—C11 | 1.320 (4) | S1—C13 | 1.801 (2) |
| N2—C12 | 1.359 (3) | O4—C15 | 1.211 (3) |
| C1—C5 | 1.408 (4) | C13—C19 | 1.384 (3) |
| C1—C12 | 1.433 (4) | C13—C14 | 1.409 (3) |
| C2—C3 | 1.382 (4) | C14—C16 | 1.402 (3) |
| C2—H2A | 0.9300 | C14—C15 | 1.487 (3) |
| C3—C4 | 1.364 (4) | C15—C16i | 1.494 (3) |
| C3—H3A | 0.9300 | C16—C17 | 1.391 (3) |
| C4—C5 | 1.406 (4) | C16—C15i | 1.494 (3) |
| C4—H4A | 0.9300 | C17—C18 | 1.369 (4) |
| C5—C6 | 1.427 (4) | C17—H17 | 0.9300 |
| C6—C7 | 1.341 (4) | C18—C19 | 1.381 (4) |
| C6—H6 | 0.9300 | C18—H18 | 0.9300 |
| C7—C8 | 1.439 (4) | C19—H19 | 0.9300 |
| C7—H7 | 0.9300 | O5—H5A | 0.8200 |
| C8—C9 | 1.405 (4) | O5—H5B | 0.8200 |
| C8—C12 | 1.406 (3) | O6—H6A | 0.8201 |
| C9—C10 | 1.363 (4) | O6—H6B | 0.8200 |
| C9—H9A | 0.9300 | O7—H7A | 0.8199 |
| C10—C11 | 1.398 (4) | O7—H7B | 0.8200 |
| C10—H10A | 0.9300 | O7—H7C | 0.8200 |
| C11—H11A | 0.9300 | ||
| C2—N1—C1 | 123.0 (3) | C10—C11—H11A | 117.9 |
| C2—N1—H1A | 117.5 (19) | N2—C12—C8 | 123.9 (3) |
| C1—N1—H1A | 119.5 (19) | N2—C12—C1 | 117.7 (2) |
| C11—N2—C12 | 116.6 (2) | C8—C12—C1 | 118.4 (2) |
| N1—C1—C5 | 118.8 (3) | O1—S1—O2 | 113.37 (14) |
| N1—C1—C12 | 120.0 (2) | O1—S1—O3 | 113.36 (17) |
| C5—C1—C12 | 121.2 (2) | O2—S1—O3 | 111.51 (15) |
| N1—C2—C3 | 120.1 (3) | O1—S1—C13 | 106.06 (12) |
| N1—C2—H2A | 119.9 | O2—S1—C13 | 108.18 (11) |
| C3—C2—H2A | 119.9 | O3—S1—C13 | 103.59 (12) |
| C4—C3—C2 | 119.3 (3) | C19—C13—C14 | 119.0 (2) |
| C4—C3—H3A | 120.3 | C19—C13—S1 | 114.84 (18) |
| C2—C3—H3A | 120.3 | C14—C13—S1 | 126.17 (18) |
| C3—C4—C5 | 121.0 (3) | C16—C14—C13 | 118.6 (2) |
| C3—C4—H4A | 119.5 | C16—C14—C15 | 117.95 (19) |
| C5—C4—H4A | 119.5 | C13—C14—C15 | 123.4 (2) |
| C4—C5—C1 | 117.7 (3) | O4—C15—C14 | 122.0 (2) |
| C4—C5—C6 | 123.7 (3) | O4—C15—C16i | 118.9 (2) |
| C1—C5—C6 | 118.6 (3) | C14—C15—C16i | 119.07 (19) |
| C7—C6—C5 | 121.0 (3) | C17—C16—C14 | 120.7 (2) |
| C7—C6—H6 | 119.5 | C17—C16—C15i | 116.5 (2) |
| C5—C6—H6 | 119.5 | C14—C16—C15i | 122.7 (2) |
| C6—C7—C8 | 121.6 (3) | C18—C17—C16 | 120.1 (2) |
| C6—C7—H7 | 119.2 | C18—C17—H17 | 119.9 |
| C8—C7—H7 | 119.2 | C16—C17—H17 | 119.9 |
| C9—C8—C12 | 116.7 (3) | C17—C18—C19 | 119.7 (2) |
| C9—C8—C7 | 124.0 (3) | C17—C18—H18 | 120.2 |
| C12—C8—C7 | 119.3 (3) | C19—C18—H18 | 120.2 |
| C10—C9—C8 | 119.8 (3) | C18—C19—C13 | 121.8 (2) |
| C10—C9—H9A | 120.1 | C18—C19—H19 | 119.1 |
| C8—C9—H9A | 120.1 | C13—C19—H19 | 119.1 |
| C9—C10—C11 | 118.9 (3) | H5A—O5—H5B | 117.0 |
| C9—C10—H10A | 120.5 | H6A—O6—H6B | 100.6 |
| C11—C10—H10A | 120.5 | H7A—O7—H7B | 106.1 |
| N2—C11—C10 | 124.1 (3) | H7A—O7—H7C | 118.2 |
| N2—C11—H11A | 117.9 | H7B—O7—H7C | 109.6 |
| C2—N1—C1—C5 | −0.7 (4) | C5—C1—C12—N2 | 179.5 (2) |
| C2—N1—C1—C12 | 180.0 (2) | N1—C1—C12—C8 | 178.7 (2) |
| C1—N1—C2—C3 | 0.0 (4) | C5—C1—C12—C8 | −0.6 (4) |
| N1—C2—C3—C4 | 0.7 (4) | O1—S1—C13—C19 | 109.1 (2) |
| C2—C3—C4—C5 | −0.7 (4) | O2—S1—C13—C19 | −129.0 (2) |
| C3—C4—C5—C1 | 0.0 (4) | O3—S1—C13—C19 | −10.6 (2) |
| C3—C4—C5—C6 | 179.5 (3) | O1—S1—C13—C14 | −70.5 (2) |
| N1—C1—C5—C4 | 0.7 (4) | O2—S1—C13—C14 | 51.5 (2) |
| C12—C1—C5—C4 | 180.0 (2) | O3—S1—C13—C14 | 169.9 (2) |
| N1—C1—C5—C6 | −178.8 (2) | C19—C13—C14—C16 | 2.4 (3) |
| C12—C1—C5—C6 | 0.5 (4) | S1—C13—C14—C16 | −178.08 (17) |
| C4—C5—C6—C7 | −179.7 (3) | C19—C13—C14—C15 | −175.1 (2) |
| C1—C5—C6—C7 | −0.2 (4) | S1—C13—C14—C15 | 4.4 (3) |
| C5—C6—C7—C8 | 0.1 (5) | C16—C14—C15—O4 | −171.1 (2) |
| C6—C7—C8—C9 | 179.4 (3) | C13—C14—C15—O4 | 6.4 (4) |
| C6—C7—C8—C12 | −0.3 (4) | C16—C14—C15—C16i | 5.7 (3) |
| C12—C8—C9—C10 | 0.0 (4) | C13—C14—C15—C16i | −176.7 (2) |
| C7—C8—C9—C10 | −179.7 (3) | C13—C14—C16—C17 | −2.4 (3) |
| C8—C9—C10—C11 | −0.4 (4) | C15—C14—C16—C17 | 175.3 (2) |
| C12—N2—C11—C10 | 0.3 (4) | C13—C14—C16—C15i | 176.4 (2) |
| C9—C10—C11—N2 | 0.3 (5) | C15—C14—C16—C15i | −5.9 (4) |
| C11—N2—C12—C8 | −0.8 (4) | C14—C16—C17—C18 | 0.3 (4) |
| C11—N2—C12—C1 | 179.1 (2) | C15i—C16—C17—C18 | −178.6 (2) |
| C9—C8—C12—N2 | 0.7 (4) | C16—C17—C18—C19 | 1.8 (4) |
| C7—C8—C12—N2 | −179.6 (2) | C17—C18—C19—C13 | −1.8 (5) |
| C9—C8—C12—C1 | −179.2 (2) | C14—C13—C19—C18 | −0.4 (4) |
| C7—C8—C12—C1 | 0.5 (4) | S1—C13—C19—C18 | −179.9 (2) |
| N1—C1—C12—N2 | −1.3 (3) |
| H··· | ||||
| N1—H1A···O5 | 0.87 (3) | 1.91 (3) | 2.713 (3) | 153 (3) |
| O5—H5A···O2ii | 0.82 | 1.97 | 2.776 (3) | 168 |
| O5—H5B···O2 | 0.82 | 2.19 | 2.931 (3) | 150 |
| O5—H5B···O4 | 0.82 | 2.48 | 3.131 (3) | 138 |
| O6—H6A···O3iii | 0.82 | 1.96 | 2.775 (3) | 170 |
| O6—H6B···O1iv | 0.82 | 1.92 | 2.739 (3) | 172 |
| O7—H7A···O6 | 0.82 | 1.97 | 2.774 (4) | 167 |
| O7—H7B···O7v | 0.82 | 2.20 | 3.021 (6) | 178 |
| O7—H7C···O5 | 0.82 | 2.48 | 3.301 (4) | 179 |
| C2—H2A···O7 | 0.93 | 2.39 | 3.300 (4) | 167 |
| C4—H4A···O1vi | 0.93 | 2.58 | 3.418 (4) | 151 |
| C6—H6···O4vi | 0.93 | 2.54 | 3.350 (3) | 145 |
| C18—H18···O3vii | 0.93 | 2.51 | 3.357 (4) | 152 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.87 (3) | 1.91 (3) | 2.713 (3) | 153 (3) |
| O5—H5 | 0.82 | 1.97 | 2.776 (3) | 168 |
| O5—H5 | 0.82 | 2.19 | 2.931 (3) | 150 |
| O5—H5 | 0.82 | 2.48 | 3.131 (3) | 138 |
| O6—H6 | 0.82 | 1.96 | 2.775 (3) | 170 |
| O6—H6 | 0.82 | 1.92 | 2.739 (3) | 172 |
| O7—H7 | 0.82 | 1.97 | 2.774 (4) | 167 |
| O7—H7 | 0.82 | 2.20 | 3.021 (6) | 178 |
| O7—H7 | 0.82 | 2.48 | 3.301 (4) | 179 |
| C2—H2 | 0.93 | 2.39 | 3.300 (4) | 167 |
| C4—H4 | 0.93 | 2.58 | 3.418 (4) | 151 |
| C6—H6⋯O4v | 0.93 | 2.54 | 3.350 (3) | 145 |
| C18—H18⋯O3vi | 0.93 | 2.51 | 3.357 (4) | 152 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .