Literature DB >> 21522944

Bis(1,10-phenanthrolin-1-ium) 9,10-di-oxo-9,10-dihydroanthracene-1,5-disul-fonate hexa-hydrate.

Jia Jia1.   

Abstract

The title hydrated molecular salt, 2C(12)H(9)N(2) (+)·C(14)H(6)O(8)S(2) (2-)·6H(2)O, consists of 1,10-phenanthrolinium (phen-H(+)) cations, anthraquinone-1,5-disulfonate (AQDS(2-)) anions, which occupy a centre of inversion, and water molecules of crystal-lization. In the crystal, a supra-molecular network structure is formed via N-H⋯O and O-H⋯O hydrogen bonds and weak C-H⋯O and π-π stacking inter-actions [centroid-centroid distances = 3.651 (6) and 3.545 (8) Å].

Entities:  

Year:  2011        PMID: 21522944      PMCID: PMC3051516          DOI: 10.1107/S1600536810053456

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For examples of multiple binding of 1,5-naphthalene­disulf­onate, see: Gao et al. (2005 ▶); Voogt & Blanch (2005 ▶). For the crystal structure of o-phenanthroline, see: Nishigaki et al. (1978 ▶). For the changes in protonated o-phenanthroline, see: Shriver et al. (1994 ▶). For weakly N—H⋯O hydrogen-bonded sulfonate ligands, see: Onoda et al. (2001 ▶). For graph-set analysis of hydrogen-bond patterns, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

2C12H9N2 +·C14H6O8S2 2−·6H2O M = 836.83 Triclinic, a = 10.0439 (6) Å b = 10.1978 (6) Å c = 11.1070 (6) Å α = 111.591 (1)° β = 98.848 (1)° γ = 111.234 (1)° V = 930.34 (9) Å3 Z = 1 Mo Kα radiation μ = 0.22 mm−1 T = 296 K 0.24 × 0.22 × 0.20 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.782, T max = 1.000 5035 measured reflections 3499 independent reflections 2964 reflections with I > 2σ(I) R int = 0.009

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.100 S = 1.06 3499 reflections 265 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.42 e Å−3 Δρmin = −0.39 e Å−3 Data collection: APEX2 (Bruker, 2003 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶) and DIAMOND (Brandenburg & Berndt, 1999 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810053456/si2318sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810053456/si2318Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
2C12H9N2+·C14H6O8S22·6H2OZ = 1
Mr = 836.83F(000) = 436
Triclinic, P1Dx = 1.494 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 10.0439 (6) ÅCell parameters from 3063 reflections
b = 10.1978 (6) Åθ = 2.4–27.6°
c = 11.1070 (6) ŵ = 0.22 mm1
α = 111.591 (1)°T = 296 K
β = 98.848 (1)°Block, yellow
γ = 111.234 (1)°0.24 × 0.22 × 0.20 mm
V = 930.34 (9) Å3
Bruker APEXII CCD area-detector diffractometer3499 independent reflections
Radiation source: fine-focus sealed tube2964 reflections with I > 2σ(I)
graphiteRint = 0.009
φ and ω scansθmax = 25.7°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −12→9
Tmin = 0.782, Tmax = 1.000k = −11→12
5035 measured reflectionsl = −11→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.100H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.P)2 + 1.1P] where P = (Fo2 + 2Fc2)/3
3499 reflections(Δ/σ)max < 0.001
265 parametersΔρmax = 0.42 e Å3
0 restraintsΔρmin = −0.39 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
N10.7261 (2)0.6318 (3)0.6490 (2)0.0508 (5)
H1A0.777 (3)0.583 (3)0.616 (3)0.061*
N20.7525 (2)0.5796 (3)0.3953 (2)0.0529 (5)
C10.6554 (3)0.6801 (3)0.5725 (3)0.0473 (6)
C20.7199 (3)0.6540 (3)0.7734 (3)0.0614 (7)
H2A0.77020.61890.82200.074*
C30.6388 (4)0.7293 (4)0.8305 (3)0.0678 (8)
H3A0.63510.74610.91790.081*
C40.5642 (3)0.7788 (3)0.7575 (3)0.0654 (8)
H4A0.50860.82850.79530.078*
C50.5701 (3)0.7558 (3)0.6260 (3)0.0547 (7)
C60.4937 (3)0.8035 (3)0.5441 (4)0.0657 (8)
H60.43660.85330.57790.079*
C70.5030 (3)0.7776 (3)0.4189 (4)0.0661 (8)
H70.45220.81010.36780.079*
C80.5896 (3)0.7008 (3)0.3618 (3)0.0536 (7)
C90.6022 (3)0.6695 (3)0.2310 (3)0.0643 (8)
H9A0.55320.69920.17560.077*
C100.6866 (4)0.5954 (4)0.1856 (3)0.0652 (8)
H10A0.69530.57350.09900.078*
C110.7599 (3)0.5531 (4)0.2714 (3)0.0610 (7)
H11A0.81740.50300.23920.073*
C120.6670 (3)0.6521 (3)0.4392 (3)0.0469 (6)
S10.78814 (8)0.11641 (9)0.22241 (7)0.05292 (19)
O10.6380 (2)0.0104 (3)0.2065 (3)0.0829 (7)
O20.8478 (2)0.2720 (2)0.3366 (2)0.0633 (5)
O30.8023 (3)0.1250 (4)0.0977 (2)0.1002 (9)
O40.7954 (2)0.1068 (3)0.4845 (2)0.0661 (6)
C130.9069 (3)0.0280 (3)0.2540 (2)0.0395 (5)
C140.9501 (2)0.0149 (3)0.3743 (2)0.0346 (5)
C150.8932 (3)0.0643 (3)0.4908 (2)0.0383 (5)
C161.0474 (2)−0.0535 (3)0.3832 (2)0.0365 (5)
C171.0957 (3)−0.1127 (3)0.2735 (3)0.0506 (6)
H171.1599−0.15830.28050.061*
C181.0489 (3)−0.1042 (4)0.1554 (3)0.0602 (8)
H181.0788−0.14650.08120.072*
C190.9570 (3)−0.0324 (3)0.1471 (3)0.0524 (6)
H190.9281−0.02450.06740.063*
O50.8925 (2)0.4707 (2)0.6231 (2)0.0661 (6)
H5A0.97580.54400.64390.099*
H5B0.86570.38920.55240.099*
O60.6538 (3)0.2203 (3)0.9409 (3)0.1278 (13)
H6A0.68930.19130.99190.192*
H6B0.56780.14700.90150.192*
O70.8515 (4)0.4711 (3)0.9125 (3)0.1289 (12)
H7A0.78600.39110.90800.193*
H7B0.93140.48780.96190.193*0.50
H7C0.86130.47150.84060.193*0.50
U11U22U33U12U13U23
N10.0456 (13)0.0436 (12)0.0565 (14)0.0198 (10)0.0116 (10)0.0190 (11)
N20.0491 (13)0.0509 (13)0.0583 (14)0.0265 (11)0.0134 (11)0.0228 (11)
C10.0359 (13)0.0337 (12)0.0602 (16)0.0118 (10)0.0078 (11)0.0169 (12)
C20.0577 (18)0.0542 (17)0.0579 (18)0.0174 (14)0.0096 (14)0.0233 (14)
C30.0648 (19)0.0566 (18)0.0622 (19)0.0178 (16)0.0222 (16)0.0171 (15)
C40.0542 (17)0.0481 (16)0.077 (2)0.0190 (14)0.0266 (16)0.0151 (15)
C50.0419 (14)0.0389 (14)0.0711 (19)0.0155 (12)0.0154 (13)0.0173 (13)
C60.0515 (17)0.0521 (17)0.094 (2)0.0305 (14)0.0218 (16)0.0285 (17)
C70.0518 (17)0.0539 (17)0.095 (2)0.0287 (14)0.0111 (16)0.0376 (17)
C80.0426 (14)0.0402 (14)0.0718 (19)0.0154 (12)0.0078 (13)0.0275 (13)
C90.0605 (18)0.0559 (17)0.076 (2)0.0212 (15)0.0093 (15)0.0398 (16)
C100.0660 (19)0.0627 (19)0.0659 (19)0.0239 (16)0.0191 (15)0.0350 (16)
C110.0562 (17)0.0614 (18)0.0654 (19)0.0291 (15)0.0193 (14)0.0271 (15)
C120.0368 (13)0.0355 (13)0.0595 (16)0.0132 (11)0.0079 (11)0.0196 (12)
S10.0617 (4)0.0595 (4)0.0475 (4)0.0369 (4)0.0117 (3)0.0279 (3)
O10.0439 (12)0.0733 (15)0.1110 (19)0.0275 (11)0.0012 (12)0.0309 (14)
O20.0819 (14)0.0497 (11)0.0684 (13)0.0355 (11)0.0266 (11)0.0308 (10)
O30.161 (3)0.153 (3)0.0635 (14)0.122 (2)0.0502 (16)0.0712 (16)
O40.0783 (14)0.1073 (17)0.0764 (14)0.0750 (14)0.0483 (12)0.0644 (13)
C130.0372 (12)0.0404 (12)0.0392 (12)0.0173 (10)0.0100 (10)0.0182 (10)
C140.0320 (11)0.0330 (11)0.0369 (12)0.0143 (9)0.0106 (9)0.0151 (9)
C150.0385 (12)0.0396 (12)0.0464 (13)0.0227 (10)0.0181 (10)0.0229 (11)
C160.0356 (12)0.0370 (12)0.0375 (12)0.0179 (10)0.0138 (9)0.0160 (10)
C170.0522 (15)0.0625 (17)0.0479 (15)0.0370 (14)0.0225 (12)0.0228 (13)
C180.0671 (19)0.083 (2)0.0429 (15)0.0455 (17)0.0283 (14)0.0256 (15)
C190.0560 (16)0.0664 (18)0.0388 (13)0.0302 (14)0.0160 (12)0.0258 (13)
O50.0582 (12)0.0608 (12)0.0744 (14)0.0309 (10)0.0177 (10)0.0243 (11)
O60.0916 (19)0.0847 (18)0.170 (3)0.0179 (15)−0.0330 (19)0.074 (2)
O70.123 (2)0.091 (2)0.150 (3)0.0416 (19)−0.005 (2)0.061 (2)
N1—C21.330 (4)S1—O11.439 (2)
N1—C11.359 (3)S1—O21.443 (2)
N1—H1A0.87 (3)S1—O31.445 (2)
N2—C111.320 (4)S1—C131.801 (2)
N2—C121.359 (3)O4—C151.211 (3)
C1—C51.408 (4)C13—C191.384 (3)
C1—C121.433 (4)C13—C141.409 (3)
C2—C31.382 (4)C14—C161.402 (3)
C2—H2A0.9300C14—C151.487 (3)
C3—C41.364 (4)C15—C16i1.494 (3)
C3—H3A0.9300C16—C171.391 (3)
C4—C51.406 (4)C16—C15i1.494 (3)
C4—H4A0.9300C17—C181.369 (4)
C5—C61.427 (4)C17—H170.9300
C6—C71.341 (4)C18—C191.381 (4)
C6—H60.9300C18—H180.9300
C7—C81.439 (4)C19—H190.9300
C7—H70.9300O5—H5A0.8200
C8—C91.405 (4)O5—H5B0.8200
C8—C121.406 (3)O6—H6A0.8201
C9—C101.363 (4)O6—H6B0.8200
C9—H9A0.9300O7—H7A0.8199
C10—C111.398 (4)O7—H7B0.8200
C10—H10A0.9300O7—H7C0.8200
C11—H11A0.9300
C2—N1—C1123.0 (3)C10—C11—H11A117.9
C2—N1—H1A117.5 (19)N2—C12—C8123.9 (3)
C1—N1—H1A119.5 (19)N2—C12—C1117.7 (2)
C11—N2—C12116.6 (2)C8—C12—C1118.4 (2)
N1—C1—C5118.8 (3)O1—S1—O2113.37 (14)
N1—C1—C12120.0 (2)O1—S1—O3113.36 (17)
C5—C1—C12121.2 (2)O2—S1—O3111.51 (15)
N1—C2—C3120.1 (3)O1—S1—C13106.06 (12)
N1—C2—H2A119.9O2—S1—C13108.18 (11)
C3—C2—H2A119.9O3—S1—C13103.59 (12)
C4—C3—C2119.3 (3)C19—C13—C14119.0 (2)
C4—C3—H3A120.3C19—C13—S1114.84 (18)
C2—C3—H3A120.3C14—C13—S1126.17 (18)
C3—C4—C5121.0 (3)C16—C14—C13118.6 (2)
C3—C4—H4A119.5C16—C14—C15117.95 (19)
C5—C4—H4A119.5C13—C14—C15123.4 (2)
C4—C5—C1117.7 (3)O4—C15—C14122.0 (2)
C4—C5—C6123.7 (3)O4—C15—C16i118.9 (2)
C1—C5—C6118.6 (3)C14—C15—C16i119.07 (19)
C7—C6—C5121.0 (3)C17—C16—C14120.7 (2)
C7—C6—H6119.5C17—C16—C15i116.5 (2)
C5—C6—H6119.5C14—C16—C15i122.7 (2)
C6—C7—C8121.6 (3)C18—C17—C16120.1 (2)
C6—C7—H7119.2C18—C17—H17119.9
C8—C7—H7119.2C16—C17—H17119.9
C9—C8—C12116.7 (3)C17—C18—C19119.7 (2)
C9—C8—C7124.0 (3)C17—C18—H18120.2
C12—C8—C7119.3 (3)C19—C18—H18120.2
C10—C9—C8119.8 (3)C18—C19—C13121.8 (2)
C10—C9—H9A120.1C18—C19—H19119.1
C8—C9—H9A120.1C13—C19—H19119.1
C9—C10—C11118.9 (3)H5A—O5—H5B117.0
C9—C10—H10A120.5H6A—O6—H6B100.6
C11—C10—H10A120.5H7A—O7—H7B106.1
N2—C11—C10124.1 (3)H7A—O7—H7C118.2
N2—C11—H11A117.9H7B—O7—H7C109.6
C2—N1—C1—C5−0.7 (4)C5—C1—C12—N2179.5 (2)
C2—N1—C1—C12180.0 (2)N1—C1—C12—C8178.7 (2)
C1—N1—C2—C30.0 (4)C5—C1—C12—C8−0.6 (4)
N1—C2—C3—C40.7 (4)O1—S1—C13—C19109.1 (2)
C2—C3—C4—C5−0.7 (4)O2—S1—C13—C19−129.0 (2)
C3—C4—C5—C10.0 (4)O3—S1—C13—C19−10.6 (2)
C3—C4—C5—C6179.5 (3)O1—S1—C13—C14−70.5 (2)
N1—C1—C5—C40.7 (4)O2—S1—C13—C1451.5 (2)
C12—C1—C5—C4180.0 (2)O3—S1—C13—C14169.9 (2)
N1—C1—C5—C6−178.8 (2)C19—C13—C14—C162.4 (3)
C12—C1—C5—C60.5 (4)S1—C13—C14—C16−178.08 (17)
C4—C5—C6—C7−179.7 (3)C19—C13—C14—C15−175.1 (2)
C1—C5—C6—C7−0.2 (4)S1—C13—C14—C154.4 (3)
C5—C6—C7—C80.1 (5)C16—C14—C15—O4−171.1 (2)
C6—C7—C8—C9179.4 (3)C13—C14—C15—O46.4 (4)
C6—C7—C8—C12−0.3 (4)C16—C14—C15—C16i5.7 (3)
C12—C8—C9—C100.0 (4)C13—C14—C15—C16i−176.7 (2)
C7—C8—C9—C10−179.7 (3)C13—C14—C16—C17−2.4 (3)
C8—C9—C10—C11−0.4 (4)C15—C14—C16—C17175.3 (2)
C12—N2—C11—C100.3 (4)C13—C14—C16—C15i176.4 (2)
C9—C10—C11—N20.3 (5)C15—C14—C16—C15i−5.9 (4)
C11—N2—C12—C8−0.8 (4)C14—C16—C17—C180.3 (4)
C11—N2—C12—C1179.1 (2)C15i—C16—C17—C18−178.6 (2)
C9—C8—C12—N20.7 (4)C16—C17—C18—C191.8 (4)
C7—C8—C12—N2−179.6 (2)C17—C18—C19—C13−1.8 (5)
C9—C8—C12—C1−179.2 (2)C14—C13—C19—C18−0.4 (4)
C7—C8—C12—C10.5 (4)S1—C13—C19—C18−179.9 (2)
N1—C1—C12—N2−1.3 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O50.87 (3)1.91 (3)2.713 (3)153 (3)
O5—H5A···O2ii0.821.972.776 (3)168
O5—H5B···O20.822.192.931 (3)150
O5—H5B···O40.822.483.131 (3)138
O6—H6A···O3iii0.821.962.775 (3)170
O6—H6B···O1iv0.821.922.739 (3)172
O7—H7A···O60.821.972.774 (4)167
O7—H7B···O7v0.822.203.021 (6)178
O7—H7C···O50.822.483.301 (4)179
C2—H2A···O70.932.393.300 (4)167
C4—H4A···O1vi0.932.583.418 (4)151
C6—H6···O4vi0.932.543.350 (3)145
C18—H18···O3vii0.932.513.357 (4)152
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O50.87 (3)1.91 (3)2.713 (3)153 (3)
O5—H5A⋯O2i0.821.972.776 (3)168
O5—H5B⋯O20.822.192.931 (3)150
O5—H5B⋯O40.822.483.131 (3)138
O6—H6A⋯O3ii0.821.962.775 (3)170
O6—H6B⋯O1iii0.821.922.739 (3)172
O7—H7A⋯O60.821.972.774 (4)167
O7—H7B⋯O7iv0.822.203.021 (6)178
O7—H7C⋯O50.822.483.301 (4)179
C2—H2A⋯O70.932.393.300 (4)167
C4—H4A⋯O1v0.932.583.418 (4)151
C6—H6⋯O4v0.932.543.350 (3)145
C18—H18⋯O3vi0.932.513.357 (4)152

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

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