| Literature DB >> 21522936 |
Yalda Kia, Hasnah Osman, Vikneswaran Al Murugaiyah, Madhukar Hemamalini, Hoong-Kun Fun.
Abstract
The title compound, C(9)H(11)N(3)O, was synthesized by the reaction of 4-methyl-benzaldehyde with semicarbazide. The mol-ecule adopts an E configuration about the central C=N double bond and the dihedral angle between the mean planes of the benzene ring and the carboxamide groups is 17.05 (9)°. The hydrazine N atoms are twisted slightly out of the plane of the carboxamide group [C-C-N-N torsion angle = 178.39 (14)°] and an intra-molecular N-H⋯N bond generates an S(5) ring. In the crystal, adjacent mol-ecules are connected via a pair of N-H⋯O hydrogen bonds, generating R(2) (2)(8) loops, resulting in supra-molecular [001] ribbons.Entities:
Year: 2011 PMID: 21522936 PMCID: PMC3051666 DOI: 10.1107/S1600536810052797
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H11N3O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 1533 reflections |
| θ = 3.4–22.6° | |
| µ = 0.09 mm−1 | |
| β = 93.348 (3)° | Plate, colourless |
| 0.76 × 0.23 × 0.05 mm | |
| Bruker SMART APEXII CCD diffractometer | 1833 independent reflections |
| Radiation source: fine-focus sealed tube | 1285 reflections with |
| graphite | |
| φ and ω scans | θmax = 26.0°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 6322 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1833 reflections | (Δ/σ)max < 0.001 |
| 131 parameters | Δρmax = 0.18 e Å−3 |
| 0 restraints | Δρmin = −0.18 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| O1 | 0.50913 (6) | 0.2012 (3) | 0.63337 (10) | 0.0540 (4) | |
| N1 | 0.34815 (7) | 0.3857 (3) | 0.45522 (11) | 0.0487 (4) | |
| N2 | 0.41216 (8) | 0.2357 (3) | 0.49998 (12) | 0.0505 (4) | |
| H1N2 | 0.4366 (10) | 0.093 (4) | 0.4589 (16) | 0.067 (6)* | |
| N3 | 0.42019 (9) | 0.5689 (3) | 0.64575 (12) | 0.0530 (4) | |
| H2N3 | 0.3792 (10) | 0.660 (5) | 0.6044 (18) | 0.076 (6)* | |
| H1N3 | 0.4490 (10) | 0.643 (4) | 0.7121 (19) | 0.072 (6)* | |
| C1 | 0.20643 (10) | 0.6318 (5) | 0.35353 (17) | 0.0676 (6) | |
| H1A | 0.2179 | 0.6835 | 0.4278 | 0.081* | |
| C2 | 0.14128 (11) | 0.7477 (5) | 0.2966 (2) | 0.0769 (7) | |
| H2A | 0.1093 | 0.8755 | 0.3337 | 0.092* | |
| C3 | 0.12229 (11) | 0.6785 (5) | 0.18552 (18) | 0.0663 (6) | |
| C4 | 0.17074 (11) | 0.4889 (5) | 0.13342 (15) | 0.0671 (6) | |
| H4A | 0.1595 | 0.4394 | 0.0589 | 0.081* | |
| C5 | 0.23599 (10) | 0.3697 (5) | 0.18930 (15) | 0.0647 (6) | |
| H5A | 0.2677 | 0.2417 | 0.1519 | 0.078* | |
| C6 | 0.25475 (9) | 0.4387 (4) | 0.30032 (13) | 0.0520 (5) | |
| C7 | 0.32332 (10) | 0.3054 (4) | 0.35755 (14) | 0.0531 (5) | |
| H7A | 0.3497 | 0.1574 | 0.3216 | 0.064* | |
| C8 | 0.44997 (9) | 0.3340 (4) | 0.59601 (13) | 0.0443 (4) | |
| C9 | 0.05146 (12) | 0.8111 (6) | 0.1244 (2) | 0.0941 (8) | |
| H9A | 0.0215 | 0.6574 | 0.0873 | 0.141* | |
| H9B | 0.0676 | 0.9508 | 0.0702 | 0.141* | |
| H9C | 0.0202 | 0.9092 | 0.1769 | 0.141* |
| O1 | 0.0579 (7) | 0.0596 (8) | 0.0426 (7) | 0.0045 (6) | −0.0143 (6) | 0.0028 (5) |
| N1 | 0.0481 (8) | 0.0571 (9) | 0.0396 (8) | 0.0016 (6) | −0.0072 (6) | 0.0002 (6) |
| N2 | 0.0525 (8) | 0.0584 (9) | 0.0388 (8) | 0.0084 (7) | −0.0125 (6) | −0.0024 (7) |
| N3 | 0.0623 (9) | 0.0541 (9) | 0.0410 (8) | 0.0013 (7) | −0.0105 (7) | −0.0040 (7) |
| C1 | 0.0656 (11) | 0.0847 (14) | 0.0503 (11) | 0.0149 (10) | −0.0135 (9) | −0.0105 (10) |
| C2 | 0.0643 (12) | 0.0895 (15) | 0.0749 (15) | 0.0209 (11) | −0.0122 (11) | −0.0104 (12) |
| C3 | 0.0569 (11) | 0.0752 (13) | 0.0642 (12) | −0.0046 (10) | −0.0192 (10) | 0.0128 (10) |
| C4 | 0.0674 (11) | 0.0875 (14) | 0.0443 (10) | −0.0055 (11) | −0.0160 (9) | 0.0042 (10) |
| C5 | 0.0612 (11) | 0.0872 (14) | 0.0445 (10) | 0.0076 (10) | −0.0080 (8) | −0.0041 (10) |
| C6 | 0.0497 (9) | 0.0642 (11) | 0.0412 (9) | −0.0002 (8) | −0.0056 (7) | 0.0008 (8) |
| C7 | 0.0523 (9) | 0.0656 (11) | 0.0405 (9) | 0.0088 (8) | −0.0050 (8) | −0.0040 (8) |
| C8 | 0.0491 (9) | 0.0485 (10) | 0.0343 (8) | −0.0080 (7) | −0.0058 (7) | 0.0078 (7) |
| C9 | 0.0724 (14) | 0.1056 (18) | 0.100 (2) | 0.0093 (13) | −0.0354 (13) | 0.0148 (15) |
| O1—C8 | 1.2436 (18) | C2—H2A | 0.9300 |
| N1—C7 | 1.275 (2) | C3—C4 | 1.373 (3) |
| N1—N2 | 1.3766 (18) | C3—C9 | 1.510 (2) |
| N2—C8 | 1.363 (2) | C4—C5 | 1.384 (2) |
| N2—H1N2 | 0.93 (2) | C4—H4A | 0.9300 |
| N3—C8 | 1.337 (2) | C5—C6 | 1.386 (2) |
| N3—H2N3 | 0.935 (19) | C5—H5A | 0.9300 |
| N3—H1N3 | 0.97 (2) | C6—C7 | 1.461 (2) |
| C1—C2 | 1.382 (2) | C7—H7A | 0.9300 |
| C1—C6 | 1.388 (3) | C9—H9A | 0.9600 |
| C1—H1A | 0.9300 | C9—H9B | 0.9600 |
| C2—C3 | 1.388 (3) | C9—H9C | 0.9600 |
| C7—N1—N2 | 115.78 (15) | C4—C5—C6 | 120.91 (19) |
| C8—N2—N1 | 119.98 (15) | C4—C5—H5A | 119.5 |
| C8—N2—H1N2 | 117.8 (11) | C6—C5—H5A | 119.5 |
| N1—N2—H1N2 | 120.9 (11) | C5—C6—C1 | 118.08 (16) |
| C8—N3—H2N3 | 114.4 (13) | C5—C6—C7 | 119.61 (17) |
| C8—N3—H1N3 | 116.6 (11) | C1—C6—C7 | 122.30 (15) |
| H2N3—N3—H1N3 | 127.9 (19) | N1—C7—C6 | 122.12 (16) |
| C2—C1—C6 | 120.24 (18) | N1—C7—H7A | 118.9 |
| C2—C1—H1A | 119.9 | C6—C7—H7A | 118.9 |
| C6—C1—H1A | 119.9 | O1—C8—N3 | 123.50 (15) |
| C1—C2—C3 | 121.8 (2) | O1—C8—N2 | 119.12 (16) |
| C1—C2—H2A | 119.1 | N3—C8—N2 | 117.37 (15) |
| C3—C2—H2A | 119.1 | C3—C9—H9A | 109.5 |
| C4—C3—C2 | 117.53 (17) | C3—C9—H9B | 109.5 |
| C4—C3—C9 | 121.5 (2) | H9A—C9—H9B | 109.5 |
| C2—C3—C9 | 120.9 (2) | C3—C9—H9C | 109.5 |
| C3—C4—C5 | 121.45 (18) | H9A—C9—H9C | 109.5 |
| C3—C4—H4A | 119.3 | H9B—C9—H9C | 109.5 |
| C5—C4—H4A | 119.3 | ||
| C7—N1—N2—C8 | 170.10 (15) | C4—C5—C6—C7 | 178.99 (16) |
| C6—C1—C2—C3 | −0.6 (3) | C2—C1—C6—C5 | 0.7 (3) |
| C1—C2—C3—C4 | 0.1 (3) | C2—C1—C6—C7 | −178.66 (19) |
| C1—C2—C3—C9 | −179.11 (19) | N2—N1—C7—C6 | 178.39 (14) |
| C2—C3—C4—C5 | 0.2 (3) | C5—C6—C7—N1 | 171.99 (17) |
| C9—C3—C4—C5 | 179.42 (19) | C1—C6—C7—N1 | −8.7 (3) |
| C3—C4—C5—C6 | −0.1 (3) | N1—N2—C8—O1 | −177.76 (13) |
| C4—C5—C6—C1 | −0.4 (3) | N1—N2—C8—N3 | 3.0 (2) |
| H··· | ||||
| N2—H1N2···O1i | 0.928 (18) | 1.998 (18) | 2.9260 (19) | 177.7 (17) |
| N3—H2N3···N1 | 0.93 (2) | 2.22 (2) | 2.667 (2) | 108.6 (16) |
| N3—H1N3···O1ii | 0.97 (2) | 1.97 (2) | 2.9106 (19) | 163.5 (17) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H1 | 0.928 (18) | 1.998 (18) | 2.9260 (19) | 177.7 (17) |
| N3—H2 | 0.93 (2) | 2.22 (2) | 2.667 (2) | 108.6 (16) |
| N3—H1 | 0.97 (2) | 1.97 (2) | 2.9106 (19) | 163.5 (17) |
Symmetry codes: (i) ; (ii) .