Literature DB >> 21522932

Bis(4-carb-oxy-pyridine-2-carboxyl-ato-κN,O)copper(II) dimethyl sulfoxide disolvate.

Hossein Aghabozorg, Saba Goodarzi, Masoud Mirzaei, Behrouz Notash.   

Abstract

In the title complex, [Cu(C(7)H(4)NO(4))(2)]·2C(2)H(6)OS, the Cu(II) atom is situated on an inversion centre and is N,O-chelated by two monoanionic 4-carb-oxy-pyridine-2-carboxyl-ate ligands in a slightly distorted square-planar coordination geometry. The dimethyl sulfoxide solvent mol-ecules and Cu(II) complex mol-ecules are linked by O-H⋯O hydrogen bonding. In addition, C-H⋯O contacts and π-π inter-actions [centroid-centroid distance = 3.590 (1) Å] occur.

Entities:  

Year:  2011        PMID: 21522932      PMCID: PMC3051791          DOI: 10.1107/S1600536811003424

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the design and synthesis of coordination compounds and complexes derived from pyridine-2,4-dicarb­oxy­lic acid, see: Aghabozorg et al. (2008 ▶); Noro et al. (2005 ▶).

Experimental

Crystal data

[Cu(C7H4NO4)2]·2C2H6OS M = 552.05 Triclinic, a = 6.8831 (14) Å b = 7.5218 (15) Å c = 11.719 (2) Å α = 102.95 (3)° β = 91.86 (3)° γ = 111.12 (3)° V = 547.3 (2) Å3 Z = 1 Mo Kα radiation μ = 1.25 mm−1 T = 298 K 0.2 × 0.10 × 0.05 mm

Data collection

Stoe IPDS II diffractometer 6125 measured reflections 2928 independent reflections 2428 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.092 S = 1.08 2928 reflections 157 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.38 e Å−3 Δρmin = −0.30 e Å−3 Data collection: X-AREA (Stoe & Cie, 2005 ▶); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811003424/bt5466sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811003424/bt5466Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C7H4NO4)2]·2C2H6OSZ = 1
Mr = 552.05F(000) = 283
Triclinic, P1Dx = 1.675 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.8831 (14) ÅCell parameters from 2928 reflections
b = 7.5218 (15) Åθ = 3.0–29.1°
c = 11.719 (2) ŵ = 1.25 mm1
α = 102.95 (3)°T = 298 K
β = 91.86 (3)°Plate, purple
γ = 111.12 (3)°0.2 × 0.1 × 0.05 mm
V = 547.3 (2) Å3
Stoe IPDS II diffractometer2428 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.034
graphiteθmax = 29.1°, θmin = 3.0°
Detector resolution: 0.15 mm pixels mm-1h = −9→9
rotation method scansk = −10→10
6125 measured reflectionsl = −16→15
2928 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.092H atoms treated by a mixture of independent and constrained refinement
S = 1.08w = 1/[σ2(Fo2) + (0.0365P)2 + 0.2725P] where P = (Fo2 + 2Fc2)/3
2928 reflections(Δ/σ)max = 0.002
157 parametersΔρmax = 0.38 e Å3
0 restraintsΔρmin = −0.30 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O50.7477 (3)0.7579 (3)0.25725 (15)0.0572 (5)
S10.74093 (10)0.67910 (10)0.12483 (5)0.04660 (16)
Cu10.50000.00000.50000.03607 (12)
O10.3689 (2)0.0279 (3)0.36230 (14)0.0448 (4)
C60.4947 (3)0.1284 (4)0.30111 (19)0.0383 (5)
C20.8846 (3)0.3107 (3)0.29424 (18)0.0362 (4)
H20.85510.34180.22490.043*
C10.7250 (3)0.2025 (3)0.34780 (18)0.0339 (4)
O20.4440 (3)0.1668 (3)0.21140 (16)0.0540 (5)
N10.7628 (3)0.1553 (3)0.44860 (15)0.0331 (4)
C71.2654 (4)0.4892 (4)0.28672 (19)0.0387 (5)
C50.9603 (3)0.2151 (3)0.49832 (18)0.0358 (4)
H50.98570.18250.56780.043*
C41.1283 (3)0.3242 (3)0.44914 (19)0.0368 (4)
H41.26480.36470.48530.044*
C31.0910 (3)0.3727 (3)0.34541 (19)0.0355 (4)
O31.4430 (3)0.5841 (3)0.35694 (15)0.0481 (4)
O41.2395 (3)0.4936 (3)0.18477 (15)0.0526 (5)
C80.6304 (5)0.8138 (5)0.0578 (2)0.0612 (7)
H8A0.48820.78470.07440.092*
H8B0.63230.7782−0.02600.092*
H8C0.71040.95220.08830.092*
C91.0046 (5)0.7850 (6)0.0982 (3)0.0713 (9)
H9A1.05770.92460.13230.107*
H9B1.01110.75970.01470.107*
H9C1.08790.72800.13320.107*
H31.538 (6)0.645 (5)0.320 (3)0.076 (11)*
U11U22U33U12U13U23
O50.0428 (9)0.0775 (13)0.0357 (9)0.0011 (9)0.0015 (7)0.0208 (9)
S10.0437 (3)0.0481 (4)0.0400 (3)0.0059 (3)0.0025 (2)0.0150 (3)
Cu10.03021 (19)0.0481 (2)0.03117 (19)0.01310 (16)0.00208 (14)0.01565 (16)
O10.0315 (8)0.0623 (11)0.0408 (8)0.0127 (7)−0.0007 (6)0.0226 (8)
C60.0351 (11)0.0454 (12)0.0332 (10)0.0140 (9)−0.0016 (8)0.0110 (9)
C20.0378 (11)0.0411 (11)0.0286 (9)0.0131 (9)−0.0010 (8)0.0105 (8)
C10.0341 (10)0.0378 (11)0.0288 (9)0.0133 (8)−0.0010 (8)0.0077 (8)
O20.0437 (9)0.0719 (12)0.0461 (10)0.0140 (9)−0.0067 (7)0.0293 (9)
N10.0336 (8)0.0394 (9)0.0272 (8)0.0142 (7)0.0019 (6)0.0096 (7)
C70.0362 (11)0.0479 (13)0.0343 (10)0.0167 (10)0.0045 (8)0.0134 (9)
C50.0359 (10)0.0437 (12)0.0296 (9)0.0161 (9)−0.0002 (8)0.0117 (8)
C40.0321 (10)0.0452 (12)0.0324 (10)0.0149 (9)−0.0008 (8)0.0089 (9)
C30.0354 (10)0.0402 (11)0.0302 (9)0.0146 (9)0.0032 (8)0.0072 (8)
O30.0342 (8)0.0658 (12)0.0363 (8)0.0073 (8)0.0045 (7)0.0169 (8)
O40.0450 (10)0.0746 (13)0.0379 (9)0.0159 (9)0.0047 (7)0.0249 (9)
C80.0671 (18)0.079 (2)0.0426 (14)0.0313 (16)0.0007 (13)0.0185 (14)
C90.0473 (16)0.109 (3)0.0604 (18)0.0251 (17)0.0136 (14)0.0325 (18)
O5—S11.5247 (19)C7—O41.212 (3)
S1—C81.760 (3)C7—O31.313 (3)
S1—C91.770 (3)C7—C31.499 (3)
Cu1—O11.9123 (16)C5—C41.384 (3)
Cu1—O1i1.9123 (16)C5—H50.9300
Cu1—N11.9657 (19)C4—C31.387 (3)
Cu1—N1i1.9657 (19)C4—H40.9300
O1—C61.284 (3)O3—H30.84 (4)
C6—O21.223 (3)C8—H8A0.9600
C6—C11.514 (3)C8—H8B0.9600
C2—C11.376 (3)C8—H8C0.9600
C2—C31.392 (3)C9—H9A0.9600
C2—H20.9300C9—H9B0.9600
C1—N11.351 (3)C9—H9C0.9600
N1—C51.334 (3)
O5—S1—C8105.52 (14)O3—C7—C3113.21 (19)
O5—S1—C9104.03 (14)N1—C5—C4121.70 (19)
C8—S1—C999.68 (17)N1—C5—H5119.2
O1—Cu1—O1i180.00 (5)C4—C5—H5119.2
O1—Cu1—N184.57 (7)C5—C4—C3119.3 (2)
O1i—Cu1—N195.43 (7)C5—C4—H4120.4
O1—Cu1—N1i95.43 (7)C3—C4—H4120.4
O1i—Cu1—N1i84.57 (7)C4—C3—C2118.7 (2)
N1—Cu1—N1i180.0C4—C3—C7122.2 (2)
C6—O1—Cu1115.22 (14)C2—C3—C7119.08 (19)
O2—C6—O1125.9 (2)C7—O3—H3111 (2)
O2—C6—C1119.3 (2)S1—C8—H8A109.5
O1—C6—C1114.78 (18)S1—C8—H8B109.5
C1—C2—C3118.97 (19)H8A—C8—H8B109.5
C1—C2—H2120.5S1—C8—H8C109.5
C3—C2—H2120.5H8A—C8—H8C109.5
N1—C1—C2121.90 (19)H8B—C8—H8C109.5
N1—C1—C6114.33 (19)S1—C9—H9A109.5
C2—C1—C6123.77 (18)S1—C9—H9B109.5
C5—N1—C1119.41 (19)H9A—C9—H9B109.5
C5—N1—Cu1129.51 (15)S1—C9—H9C109.5
C1—N1—Cu1111.07 (14)H9A—C9—H9C109.5
O4—C7—O3124.8 (2)H9B—C9—H9C109.5
O4—C7—C3122.0 (2)
N1—Cu1—O1—C6−0.79 (18)O1i—Cu1—N1—C50.0 (2)
N1i—Cu1—O1—C6179.21 (18)O1—Cu1—N1—C1−0.07 (15)
Cu1—O1—C6—O2−178.7 (2)O1i—Cu1—N1—C1179.93 (15)
Cu1—O1—C6—C11.4 (3)C1—N1—C5—C4−0.1 (3)
C3—C2—C1—N10.1 (3)Cu1—N1—C5—C4179.81 (16)
C3—C2—C1—C6179.5 (2)N1—C5—C4—C3−0.1 (3)
O2—C6—C1—N1178.6 (2)C5—C4—C3—C20.4 (3)
O1—C6—C1—N1−1.5 (3)C5—C4—C3—C7−179.5 (2)
O2—C6—C1—C2−0.8 (4)C1—C2—C3—C4−0.4 (3)
O1—C6—C1—C2179.2 (2)C1—C2—C3—C7179.5 (2)
C2—C1—N1—C50.1 (3)O4—C7—C3—C4162.8 (2)
C6—C1—N1—C5−179.27 (19)O3—C7—C3—C4−17.7 (3)
C2—C1—N1—Cu1−179.83 (17)O4—C7—C3—C2−17.1 (4)
C6—C1—N1—Cu10.8 (2)O3—C7—C3—C2162.4 (2)
O1—Cu1—N1—C5180.0 (2)
D—H···AD—HH···AD···AD—H···A
O3—H3···O5ii0.84 (4)1.68 (4)2.518 (3)173 (4)
C4—H4···O3iii0.932.553.427 (3)158
C5—H5···O5iv0.932.553.370 (3)147
C8—H8B···O2v0.962.383.223 (3)147
C9—H9C···O40.962.513.448 (4)164
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3⋯O5i0.84 (4)1.68 (4)2.518 (3)173 (4)
C4—H4⋯O3ii0.932.553.427 (3)158
C5—H5⋯O5iii0.932.553.370 (3)147
C8—H8B⋯O2iv0.962.383.223 (3)147
C9—H9C⋯O40.962.513.448 (4)164

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Framework control by a metalloligand having multicoordination ability: new synthetic approach for crystal structures and magnetic properties.

Authors:  Shin-Ichiro Noro; Hitoshi Miyasaka; Susumu Kitagawa; Tatsuo Wada; Takashi Okubo; Masahiro Yamashita; Tadaoki Mitani
Journal:  Inorg Chem       Date:  2005-01-10       Impact factor: 5.165

  2 in total
  1 in total

1.  Poly[tri-μ(2)-aqua-(μ(3)-pyridine-2,4-dicarboxyl-ato-κN,O:O:O)barium].

Authors:  Hoda Pasdar; Shadi Siabi; Behrouz Notash; Hossein Aghabozorg; Naser Foroughifar
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-06-04
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.