| Literature DB >> 21522917 |
Hossein Eshtiagh-Hosseini, Nafiseh Alfi, Masoud Mirzaei, Philip E Fanwick.
Abstract
The title compound, (C(6)H(9)N(2))(2)[Co(C(6)H(2)N(2)O(4))(2)(H(2)O)(2)]·8H(2)O, was obtained by the reaction of CoCl(2)·6H(2)O with 1,4-pyrazine-2,3-dicarb-oxy-lic acid and 2-amino-6-methyl-pyridine in aqueous solution (molar ratio 1:2:2). The Co(II) ion is situated on an inversion centre and is coordinated by two O and two N atoms of two symmetry-related 1,4-pyrazine-2,3-dicarboxyl-ate ligands and two water mol-ecules and has a disorted octa-hedral coordination environment. The asymmetric unit also contains four water mol-ecules. In the crystal, extensive inter-molecular classical N-H⋯O, O-H⋯O and O-H⋯N hydrogen bonds and π-π stacking inter-actions [centroid-centroid distance = 3.490 (1) Å] connect the various components, forming a three-dimensional network.Entities:
Year: 2011 PMID: 21522917 PMCID: PMC3051538 DOI: 10.1107/S1600536811001127
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| (C6H9N2)2[Co(C6H2N2O4)2(H2O)2]·8H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Cu - |
| Cell parameters from 3181 reflections | |
| θ = 3–71° | |
| µ = 4.68 mm−1 | |
| α = 109.604 (4)° | |
| β = 90.424 (5)° | Chunk, brown |
| γ = 105.524 (4)° | 0.20 × 0.18 × 0.14 mm |
| Rigaku RAPID II diffractometer | 3151 reflections with > 2.0σ( |
| confocal optics | |
| ω scans | θmax = 71.9°, θmin = 3.5° |
| Absorption correction: multi-scan ( | |
| 19137 measured reflections | |
| 3152 independent reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
| (Δ/σ)max = 0.001 | |
| Δρmax = 0.23 e Å−3 | |
| 3152 reflections | Δρmin = −0.40 e Å−3 |
| 285 parameters |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement on |
| Co1 | 1.0000 | 0.5000 | 0.0000 | 0.01861 (12) | |
| O1W | 0.78751 (19) | 0.34893 (13) | −0.12293 (10) | 0.0281 (3) | |
| O21 | 0.79587 (17) | 0.45953 (12) | 0.10552 (10) | 0.0244 (3) | |
| O22 | 0.70494 (18) | 0.32395 (14) | 0.20508 (10) | 0.0309 (3) | |
| O2W | 0.4756 (2) | 0.56148 (13) | 0.22356 (12) | 0.0277 (3) | |
| O31 | 0.97825 (17) | 0.20966 (12) | 0.31826 (9) | 0.0257 (3) | |
| O32 | 0.77764 (18) | 0.02378 (12) | 0.18707 (10) | 0.0278 (3) | |
| O3W | 0.6610 (2) | 0.37101 (15) | 0.42401 (11) | 0.0318 (3) | |
| O4W | 0.3166 (2) | 0.44434 (16) | 0.37295 (12) | 0.0307 (3) | |
| O5W | 0.3645 (2) | 0.92255 (14) | 0.12233 (11) | 0.0301 (3) | |
| N1 | 1.08935 (19) | 0.33770 (13) | 0.03478 (10) | 0.0185 (3) | |
| N4 | 1.1850 (2) | 0.14113 (14) | 0.11111 (11) | 0.0212 (3) | |
| N11 | 0.82673 (19) | 0.07875 (14) | 0.46263 (11) | 0.0201 (3) | |
| N12 | 0.6818 (2) | −0.13230 (16) | 0.32292 (12) | 0.0243 (3) | |
| C2 | 0.9819 (2) | 0.29538 (15) | 0.10633 (12) | 0.0179 (3) | |
| C3 | 1.0303 (2) | 0.19613 (16) | 0.14422 (13) | 0.0188 (3) | |
| C5 | 1.2920 (2) | 0.18647 (17) | 0.04140 (13) | 0.0219 (3) | |
| C6 | 1.2436 (2) | 0.28428 (17) | 0.00249 (13) | 0.0213 (3) | |
| C12 | 0.7163 (2) | −0.06269 (17) | 0.42549 (13) | 0.0200 (3) | |
| C13 | 0.6442 (2) | −0.12847 (18) | 0.49910 (14) | 0.0240 (4) | |
| C14 | 0.6901 (3) | −0.0497 (2) | 0.60314 (15) | 0.0286 (4) | |
| C15 | 0.8071 (3) | 0.0960 (2) | 0.63821 (14) | 0.0281 (4) | |
| C16 | 0.8729 (2) | 0.15970 (18) | 0.56645 (14) | 0.0239 (3) | |
| C17 | 0.9948 (3) | 0.31426 (18) | 0.59367 (16) | 0.0307 (4) | |
| C21 | 0.8125 (2) | 0.36383 (17) | 0.14298 (13) | 0.0215 (3) | |
| C31 | 0.9158 (2) | 0.13968 (17) | 0.22335 (13) | 0.0211 (3) | |
| H5 | 1.4018 | 0.1516 | 0.0183 | 0.026* | |
| H6 | 1.3200 | 0.3128 | −0.0467 | 0.026* | |
| H11 | 0.869 (3) | 0.117 (2) | 0.4202 (17) | 0.023 (5)* | |
| H13 | 0.5660 | −0.2248 | 0.4768 | 0.029* | |
| H14 | 0.6432 | −0.0930 | 0.6518 | 0.034* | |
| H15 | 0.8394 | 0.1485 | 0.7095 | 0.034* | |
| H121 | 0.618 (3) | −0.223 (3) | 0.3014 (17) | 0.032 (5)* | |
| H122 | 0.716 (3) | −0.086 (3) | 0.2827 (19) | 0.035 (6)* | |
| H17A | 1.1225 | 0.3185 | 0.5646 | 0.046* | |
| H17B | 1.0194 | 0.3600 | 0.6684 | 0.046* | |
| H17C | 0.9210 | 0.3636 | 0.5655 | 0.046* | |
| H1W1 | 0.712 (4) | 0.374 (3) | −0.150 (2) | 0.044 (7)* | |
| H1W2 | 0.729 (4) | 0.263 (3) | −0.1249 (19) | 0.045 (7)* | |
| H2W1 | 0.561 (4) | 0.520 (3) | 0.191 (2) | 0.052 (7)* | |
| H2W2 | 0.431 (4) | 0.528 (3) | 0.260 (2) | 0.037 (7)* | |
| H3W1 | 0.728 (4) | 0.345 (3) | 0.378 (2) | 0.046 (7)* | |
| H3W2 | 0.564 (4) | 0.389 (3) | 0.399 (2) | 0.050 (7)* | |
| H4W1 | 0.300 (4) | 0.493 (3) | 0.430 (2) | 0.039 (7)* | |
| H4W2 | 0.219 (4) | 0.375 (3) | 0.356 (2) | 0.051 (7)* | |
| H5W1 | 0.478 (4) | 0.970 (3) | 0.145 (2) | 0.049 (7)* | |
| H5W2 | 0.304 (4) | 0.977 (3) | 0.125 (2) | 0.042 (7)* |
| Co1 | 0.02261 (19) | 0.01812 (18) | 0.0174 (2) | 0.00806 (13) | 0.00137 (13) | 0.00745 (14) |
| O1W | 0.0329 (6) | 0.0208 (6) | 0.0290 (8) | 0.0054 (5) | −0.0089 (5) | 0.0086 (5) |
| O21 | 0.0262 (6) | 0.0268 (6) | 0.0269 (7) | 0.0142 (5) | 0.0064 (5) | 0.0126 (5) |
| O22 | 0.0295 (6) | 0.0455 (7) | 0.0302 (8) | 0.0197 (5) | 0.0137 (5) | 0.0219 (6) |
| O2W | 0.0279 (6) | 0.0239 (6) | 0.0322 (8) | 0.0108 (5) | 0.0006 (5) | 0.0083 (6) |
| O31 | 0.0292 (6) | 0.0268 (6) | 0.0191 (7) | 0.0024 (5) | −0.0001 (5) | 0.0100 (5) |
| O32 | 0.0292 (6) | 0.0258 (6) | 0.0242 (7) | −0.0011 (5) | −0.0008 (5) | 0.0105 (5) |
| O3W | 0.0355 (7) | 0.0367 (7) | 0.0249 (8) | 0.0124 (6) | 0.0078 (6) | 0.0113 (6) |
| O4W | 0.0306 (7) | 0.0281 (6) | 0.0273 (9) | 0.0037 (6) | 0.0009 (5) | 0.0058 (6) |
| O5W | 0.0247 (6) | 0.0248 (6) | 0.0455 (9) | 0.0092 (5) | 0.0019 (5) | 0.0166 (6) |
| N1 | 0.0216 (6) | 0.0175 (6) | 0.0158 (7) | 0.0058 (5) | 0.0009 (5) | 0.0051 (5) |
| N4 | 0.0232 (6) | 0.0203 (6) | 0.0211 (8) | 0.0084 (5) | 0.0008 (5) | 0.0069 (5) |
| N11 | 0.0193 (6) | 0.0221 (6) | 0.0213 (8) | 0.0071 (5) | 0.0034 (5) | 0.0098 (6) |
| N12 | 0.0257 (7) | 0.0217 (7) | 0.0235 (9) | 0.0014 (6) | 0.0001 (6) | 0.0098 (6) |
| C2 | 0.0194 (7) | 0.0173 (7) | 0.0152 (9) | 0.0045 (5) | 0.0001 (6) | 0.0040 (6) |
| C3 | 0.0193 (7) | 0.0178 (7) | 0.0167 (9) | 0.0035 (5) | −0.0015 (6) | 0.0042 (6) |
| C5 | 0.0224 (7) | 0.0232 (7) | 0.0205 (9) | 0.0101 (6) | 0.0038 (6) | 0.0053 (6) |
| C6 | 0.0233 (7) | 0.0223 (7) | 0.0192 (9) | 0.0081 (6) | 0.0061 (6) | 0.0070 (6) |
| C12 | 0.0157 (7) | 0.0239 (7) | 0.0232 (10) | 0.0081 (6) | 0.0024 (6) | 0.0099 (7) |
| C13 | 0.0206 (7) | 0.0264 (8) | 0.0288 (11) | 0.0072 (6) | 0.0056 (6) | 0.0139 (7) |
| C14 | 0.0259 (8) | 0.0404 (10) | 0.0286 (11) | 0.0145 (7) | 0.0109 (7) | 0.0194 (8) |
| C15 | 0.0276 (8) | 0.0383 (9) | 0.0201 (10) | 0.0159 (7) | 0.0057 (7) | 0.0072 (8) |
| C16 | 0.0200 (7) | 0.0268 (8) | 0.0260 (10) | 0.0123 (6) | 0.0021 (6) | 0.0062 (7) |
| C17 | 0.0326 (9) | 0.0248 (8) | 0.0312 (11) | 0.0111 (7) | −0.0016 (7) | 0.0031 (7) |
| C21 | 0.0211 (7) | 0.0243 (8) | 0.0196 (9) | 0.0086 (6) | 0.0009 (6) | 0.0066 (7) |
| C31 | 0.0214 (7) | 0.0220 (7) | 0.0230 (10) | 0.0079 (6) | 0.0019 (6) | 0.0104 (7) |
| Co1—O21i | 2.0790 (12) | N11—C12 | 1.357 (2) |
| Co1—O21 | 2.0790 (11) | N11—C16 | 1.363 (2) |
| Co1—O1W | 2.0841 (12) | N11—H11 | 0.82 (2) |
| Co1—O1Wi | 2.0841 (12) | N12—C12 | 1.325 (2) |
| Co1—N1 | 2.1045 (12) | N12—H121 | 0.86 (2) |
| Co1—N1i | 2.1045 (12) | N12—H122 | 0.84 (2) |
| O1W—H1W1 | 0.77 (3) | C2—C3 | 1.393 (2) |
| O1W—H1W2 | 0.86 (3) | C2—C21 | 1.516 (2) |
| O21—C21 | 1.2760 (19) | C3—C31 | 1.518 (2) |
| O22—C21 | 1.228 (2) | C5—C6 | 1.388 (2) |
| O2W—H2W1 | 0.85 (3) | C5—H5 | 0.9300 |
| O2W—H2W2 | 0.72 (3) | C6—H6 | 0.9300 |
| O31—C31 | 1.256 (2) | C12—C13 | 1.410 (2) |
| O32—C31 | 1.244 (2) | C13—C14 | 1.361 (3) |
| O3W—H3W1 | 0.80 (3) | C13—H13 | 0.9300 |
| O3W—H3W2 | 0.84 (3) | C14—C15 | 1.404 (3) |
| O4W—H4W1 | 0.80 (3) | C14—H14 | 0.9300 |
| O4W—H4W2 | 0.80 (3) | C15—C16 | 1.365 (3) |
| O5W—H5W1 | 0.79 (3) | C15—H15 | 0.9300 |
| O5W—H5W2 | 0.77 (3) | C16—C17 | 1.494 (2) |
| N1—C6 | 1.329 (2) | C17—H17A | 0.9600 |
| N1—C2 | 1.344 (2) | C17—H17B | 0.9600 |
| N4—C5 | 1.335 (2) | C17—H17C | 0.9600 |
| N4—C3 | 1.342 (2) | ||
| O21i—Co1—O21 | 180.00 (7) | N4—C3—C2 | 121.24 (14) |
| O21i—Co1—O1W | 90.50 (5) | N4—C3—C31 | 114.49 (13) |
| O21—Co1—O1W | 89.50 (5) | C2—C3—C31 | 124.27 (14) |
| O21i—Co1—O1Wi | 89.50 (5) | N4—C5—C6 | 121.69 (14) |
| O21—Co1—O1Wi | 90.50 (5) | N4—C5—H5 | 119.20 |
| O1W—Co1—O1Wi | 180.00 (6) | C6—C5—H5 | 119.20 |
| O21i—Co1—N1 | 100.88 (5) | N1—C6—C5 | 120.75 (14) |
| O21—Co1—N1 | 79.12 (5) | N1—C6—H6 | 119.60 |
| O1W—Co1—N1 | 92.48 (5) | C5—C6—H6 | 119.60 |
| O1Wi—Co1—N1 | 87.52 (5) | N12—C12—N11 | 119.07 (15) |
| O21i—Co1—N1i | 79.12 (5) | N12—C12—C13 | 123.23 (15) |
| O21—Co1—N1i | 100.88 (5) | N11—C12—C13 | 117.70 (15) |
| O1W—Co1—N1i | 87.52 (5) | C14—C13—C12 | 119.36 (15) |
| O1Wi—Co1—N1i | 92.48 (5) | C14—C13—H13 | 120.30 |
| N1—Co1—N1i | 180.00 (6) | C12—C13—H13 | 120.30 |
| Co1—O1W—H1W1 | 119.7 (19) | C13—C14—C15 | 121.07 (16) |
| Co1—O1W—H1W2 | 122.8 (17) | C13—C14—H14 | 119.50 |
| H1W1—O1W—H1W2 | 109 (2) | C15—C14—H14 | 119.50 |
| C21—O21—Co1 | 116.29 (10) | C16—C15—C14 | 119.19 (17) |
| H2W1—O2W—H2W2 | 110 (3) | C16—C15—H15 | 120.40 |
| H3W1—O3W—H3W2 | 108 (3) | C14—C15—H15 | 120.40 |
| H4W1—O4W—H4W2 | 104 (3) | N11—C16—C15 | 118.88 (15) |
| H5W1—O5W—H5W2 | 106 (3) | N11—C16—C17 | 116.76 (16) |
| C6—N1—C2 | 118.50 (13) | C15—C16—C17 | 124.35 (17) |
| C6—N1—Co1 | 128.65 (11) | C16—C17—H17A | 109.50 |
| C2—N1—Co1 | 112.57 (10) | C16—C17—H17B | 109.50 |
| C5—N4—C3 | 117.44 (13) | H17A—C17—H17B | 109.50 |
| C12—N11—C16 | 123.77 (15) | C16—C17—H17C | 109.50 |
| C12—N11—H11 | 117.9 (15) | H17A—C17—H17C | 109.50 |
| C16—N11—H11 | 118.3 (15) | H17B—C17—H17C | 109.50 |
| C12—N12—H121 | 117.3 (15) | O22—C21—O21 | 125.85 (15) |
| C12—N12—H122 | 119.2 (16) | O22—C21—C2 | 118.38 (14) |
| H121—N12—H122 | 123 (2) | O21—C21—C2 | 115.77 (13) |
| N1—C2—C3 | 120.37 (14) | O32—C31—O31 | 126.69 (15) |
| N1—C2—C21 | 116.14 (13) | O32—C31—C3 | 116.34 (15) |
| C3—C2—C21 | 123.47 (14) | O31—C31—C3 | 116.80 (13) |
| O21i—Co1—O21—C21 | 113 (47) | C3—N4—C5—C6 | −1.4 (2) |
| O1W—Co1—O21—C21 | 93.19 (12) | C2—N1—C6—C5 | 0.3 (2) |
| O1Wi—Co1—O21—C21 | −86.81 (12) | Co1—N1—C6—C5 | 173.81 (11) |
| N1—Co1—O21—C21 | 0.57 (11) | N4—C5—C6—N1 | 0.9 (2) |
| N1i—Co1—O21—C21 | −179.43 (11) | C16—N11—C12—N12 | −179.22 (14) |
| O21i—Co1—N1—C6 | 3.94 (14) | C16—N11—C12—C13 | 0.6 (2) |
| O21—Co1—N1—C6 | −176.06 (14) | N12—C12—C13—C14 | 178.72 (15) |
| O1W—Co1—N1—C6 | 94.93 (14) | N11—C12—C13—C14 | −1.1 (2) |
| O1Wi—Co1—N1—C6 | −85.07 (14) | C12—C13—C14—C15 | 0.3 (2) |
| N1i—Co1—N1—C6 | 85 (62) | C13—C14—C15—C16 | 1.0 (2) |
| O21i—Co1—N1—C2 | 177.76 (10) | C12—N11—C16—C15 | 0.7 (2) |
| O21—Co1—N1—C2 | −2.24 (10) | C12—N11—C16—C17 | −179.59 (14) |
| O1W—Co1—N1—C2 | −91.26 (11) | C14—C15—C16—N11 | −1.5 (2) |
| O1Wi—Co1—N1—C2 | 88.74 (11) | C14—C15—C16—C17 | 178.83 (15) |
| N1i—Co1—N1—C2 | −102 (62) | Co1—O21—C21—O22 | −179.10 (14) |
| C6—N1—C2—C3 | −0.9 (2) | Co1—O21—C21—C2 | 1.06 (18) |
| Co1—N1—C2—C3 | −175.43 (11) | N1—C2—C21—O22 | 177.04 (14) |
| C6—N1—C2—C21 | 177.95 (13) | C3—C2—C21—O22 | −4.1 (2) |
| Co1—N1—C2—C21 | 3.44 (16) | N1—C2—C21—O21 | −3.1 (2) |
| C5—N4—C3—C2 | 0.7 (2) | C3—C2—C21—O21 | 175.73 (14) |
| C5—N4—C3—C31 | −179.98 (13) | N4—C3—C31—O32 | −85.16 (17) |
| N1—C2—C3—N4 | 0.4 (2) | C2—C3—C31—O32 | 94.11 (19) |
| C21—C2—C3—N4 | −178.37 (14) | N4—C3—C31—O31 | 90.54 (17) |
| N1—C2—C3—C31 | −178.80 (14) | C2—C3—C31—O31 | −90.20 (19) |
| C21—C2—C3—C31 | 2.4 (2) |
| H··· | ||||
| N11—H11···O31 | 0.82 (2) | 1.98 (2) | 2.794 (3) | 179 (2) |
| N12—H121···O2Wii | 0.86 (3) | 2.05 (2) | 2.900 (2) | 170 (2) |
| N12—H122···O32 | 0.84 (3) | 1.97 (3) | 2.804 (3) | 176 (2) |
| O1W—H1W1···O2Wiii | 0.78 (3) | 1.99 (3) | 2.770 (3) | 178 (3) |
| O1W—H1W2···O5Wiii | 0.85 (3) | 1.85 (3) | 2.697 (2) | 172 (3) |
| O2W—H2W1···O21 | 0.85 (3) | 2.10 (3) | 2.942 (3) | 168 (3) |
| O2W—H2W2···O4W | 0.72 (3) | 2.07 (3) | 2.784 (3) | 176 (2) |
| O3W—H3W2···O4W | 0.83 (3) | 1.99 (3) | 2.811 (3) | 167 (3) |
| O4W—H4W1···O3Wiv | 0.80 (3) | 1.98 (2) | 2.755 (2) | 165 (3) |
| O4W—H4W2···O31v | 0.80 (2) | 1.94 (2) | 2.738 (2) | 178 (3) |
| O5W—H5W1···O32vi | 0.79 (2) | 2.00 (3) | 2.767 (2) | 161 (3) |
| O5W—H5W2···N4vii | 0.77 (3) | 2.11 (3) | 2.871 (3) | 167 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N11—H11⋯O31 | 0.82 (2) | 1.98 (2) | 2.794 (3) | 179 (2) |
| N12—H121⋯O2Wi | 0.86 (3) | 2.05 (2) | 2.900 (2) | 170 (2) |
| N12—H122⋯O32 | 0.84 (3) | 1.97 (3) | 2.804 (3) | 176 (2) |
| O1W—H1W1⋯O2Wii | 0.78 (3) | 1.99 (3) | 2.770 (3) | 178 (3) |
| O1W—H1W2⋯O5Wii | 0.85 (3) | 1.85 (3) | 2.697 (2) | 172 (3) |
| O2W—H2W1⋯O21 | 0.85 (3) | 2.10 (3) | 2.942 (3) | 168 (3) |
| O2W—H2W2⋯O4W | 0.72 (3) | 2.07 (3) | 2.784 (3) | 176 (2) |
| O3W—H3W2⋯O4W | 0.83 (3) | 1.99 (3) | 2.811 (3) | 167 (3) |
| O4W—H4W1⋯O3Wiii | 0.80 (3) | 1.98 (2) | 2.755 (2) | 165 (3) |
| O4W—H4W2⋯O31iv | 0.80 (2) | 1.94 (2) | 2.738 (2) | 178 (3) |
| O5W—H5W1⋯O32v | 0.79 (2) | 2.00 (3) | 2.767 (2) | 161 (3) |
| O5W—H5W2⋯N4vi | 0.77 (3) | 2.11 (3) | 2.871 (3) | 167 (3) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .