Literature DB >> 21522912

Dibromido{2-morpholino-N-[1-(2-pyrid-yl)ethyl-idene]ethanamine-κN,N',N''}zinc(II).

Yan-Wei Ding, Xiao-Ling Wang, Li-Li Ni.   

Abstract

In the title complex, [ZnBr(2)(C(13)H(19)N(3)O)], the Zn(II) atom is five-coordinated by the three N-donor atoms of the Schiff base ligand and by two Br atoms in a distorted square-pyramidal geometry. The morpholine ring adopts a chair conformation.

Entities:  

Year:  2011        PMID: 21522912      PMCID: PMC3051576          DOI: 10.1107/S1600536811002753

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to Schiff base complexes, see: Dhar & Chakravarty (2003 ▶); Das et al. (2006 ▶); Nayak et al. (2006 ▶). For the crystal structures of similar Schiff basezinc(II) complexes, see: Wang (2010 ▶); Zhu et al. (2007 ▶); Li & Zhang (2004 ▶); Zhu & Yang (2008 ▶).

Experimental

Crystal data

[ZnBr2(C13H19N3O)] M = 458.50 Monoclinic, a = 9.831 (4) Å b = 13.985 (6) Å c = 12.183 (5) Å β = 106.626 (4)° V = 1604.9 (11) Å3 Z = 4 Mo Kα radiation μ = 6.51 mm−1 T = 298 K 0.35 × 0.32 × 0.32 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.209, T max = 0.230 12426 measured reflections 3411 independent reflections 2159 reflections with I > 2σ(I) R int = 0.108

Refinement

R[F 2 > 2σ(F 2)] = 0.065 wR(F 2) = 0.177 S = 1.05 3411 reflections 182 parameters H-atom parameters constrained Δρmax = 1.35 e Å−3 Δρmin = −1.26 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAIn class="Chemical">NT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811002753/su2250sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811002753/su2250Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[ZnBr2(C13H19N3O)]F(000) = 904
Mr = 458.50Dx = 1.898 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 1887 reflections
a = 9.831 (4) Åθ = 2.3–25.1°
b = 13.985 (6) ŵ = 6.51 mm1
c = 12.183 (5) ÅT = 298 K
β = 106.626 (4)°Block, colourless
V = 1604.9 (11) Å30.35 × 0.32 × 0.32 mm
Z = 4
Bruker SMART CCD area-detector diffractometer3411 independent reflections
Radiation source: fine-focus sealed tube2159 reflections with I > 2σ(I)
graphiteRint = 0.108
ω scansθmax = 27.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −12→12
Tmin = 0.209, Tmax = 0.230k = −17→17
12426 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.065Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.177H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0584P)2 + 5.9893P] where P = (Fo2 + 2Fc2)/3
3411 reflections(Δ/σ)max < 0.001
182 parametersΔρmax = 1.35 e Å3
0 restraintsΔρmin = −1.26 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Zn10.27265 (9)0.91109 (6)0.83908 (8)0.0207 (3)
Br10.45896 (10)0.79761 (8)0.87089 (9)0.0448 (3)
Br20.04314 (10)0.86043 (7)0.72941 (9)0.0418 (3)
O10.3163 (7)0.9365 (6)0.4853 (6)0.0490 (19)
N10.2385 (7)0.8835 (5)1.0100 (6)0.0247 (16)
N20.2537 (7)1.0444 (5)0.9095 (6)0.0252 (16)
N30.3418 (6)1.0118 (5)0.7105 (5)0.0227 (15)
C10.1995 (7)0.9617 (6)1.0565 (6)0.0210 (18)
C20.1623 (9)0.9559 (7)1.1573 (7)0.033 (2)
H20.13491.01051.18890.040*
C30.1660 (11)0.8680 (8)1.2116 (8)0.044 (3)
H30.13940.86301.27880.053*
C40.2089 (10)0.7900 (8)1.1649 (8)0.042 (3)
H40.21550.73071.20060.051*
C50.2422 (10)0.8003 (7)1.0642 (8)0.036 (2)
H50.26900.74601.03140.043*
C60.2071 (8)1.0522 (6)0.9937 (7)0.0251 (19)
C70.1620 (9)1.1447 (6)1.0362 (8)0.036 (2)
H7A0.24391.17701.08400.054*
H7B0.09671.13151.07970.054*
H7C0.11671.18470.97210.054*
C80.2824 (10)1.1260 (6)0.8452 (8)0.036 (2)
H8A0.32041.17850.89690.043*
H8B0.19541.14720.79020.043*
C90.3870 (10)1.0959 (6)0.7849 (8)0.037 (2)
H9A0.40311.14890.73880.045*
H9B0.47641.08150.84140.045*
C100.4615 (9)0.9792 (7)0.6732 (8)0.038 (2)
H10A0.53390.95380.73840.045*
H10B0.50201.03310.64340.045*
C110.4195 (12)0.9037 (7)0.5826 (9)0.046 (3)
H11A0.50260.88350.56100.055*
H11B0.38290.84870.61350.055*
C120.1956 (11)0.9629 (8)0.5184 (8)0.048 (3)
H12A0.15940.90730.54850.057*
H12B0.12230.98500.45160.057*
C130.2283 (9)1.0409 (7)0.6081 (8)0.036 (2)
H13A0.25731.09820.57590.043*
H13B0.14321.05580.62980.043*
U11U22U33U12U13U23
Zn10.0158 (5)0.0246 (5)0.0212 (5)−0.0006 (4)0.0046 (4)−0.0044 (4)
Br10.0322 (6)0.0540 (7)0.0475 (7)0.0094 (5)0.0102 (5)0.0007 (5)
Br20.0264 (5)0.0500 (6)0.0486 (7)−0.0049 (4)0.0101 (4)−0.0081 (5)
O10.038 (4)0.083 (5)0.030 (4)0.004 (4)0.016 (3)−0.002 (4)
N10.022 (4)0.032 (4)0.019 (4)0.004 (3)0.004 (3)−0.001 (3)
N20.024 (4)0.027 (4)0.022 (4)0.000 (3)0.001 (3)−0.004 (3)
N30.018 (3)0.028 (4)0.020 (4)−0.003 (3)0.004 (3)0.005 (3)
C10.007 (4)0.037 (5)0.015 (4)0.000 (3)−0.003 (3)−0.005 (3)
C20.025 (5)0.049 (6)0.027 (5)−0.005 (4)0.007 (4)−0.015 (4)
C30.046 (6)0.070 (8)0.014 (5)−0.009 (5)0.006 (4)0.002 (5)
C40.052 (6)0.049 (6)0.025 (5)−0.006 (5)0.010 (5)0.009 (5)
C50.035 (5)0.034 (5)0.036 (6)0.006 (4)0.007 (4)0.000 (4)
C60.021 (4)0.028 (4)0.023 (5)−0.003 (3)0.002 (4)−0.010 (4)
C70.028 (5)0.034 (5)0.047 (6)0.010 (4)0.014 (4)−0.012 (4)
C80.051 (6)0.026 (5)0.031 (5)−0.008 (4)0.012 (5)−0.006 (4)
C90.040 (6)0.032 (5)0.037 (6)−0.023 (4)0.006 (4)−0.002 (4)
C100.020 (5)0.055 (6)0.041 (6)−0.003 (4)0.011 (4)0.008 (5)
C110.051 (6)0.055 (7)0.041 (6)0.007 (5)0.027 (5)−0.003 (5)
C120.043 (6)0.072 (8)0.023 (5)−0.005 (5)0.002 (5)−0.003 (5)
C130.030 (5)0.042 (6)0.035 (5)0.002 (4)0.007 (4)0.008 (4)
Zn1—N22.083 (7)C4—H40.9300
Zn1—N12.235 (7)C5—H50.9300
Zn1—N32.347 (6)C6—C71.507 (11)
Zn1—Br12.3701 (15)C7—H7A0.9600
Zn1—Br22.3775 (15)C7—H7B0.9600
O1—C111.398 (12)C7—H7C0.9600
O1—C121.407 (12)C8—C91.485 (13)
N1—C51.334 (11)C8—H8A0.9700
N1—C11.337 (10)C8—H8B0.9700
N2—C61.241 (11)C9—H9A0.9700
N2—C81.457 (11)C9—H9B0.9700
N3—C101.451 (11)C10—C111.496 (13)
N3—C131.474 (10)C10—H10A0.9700
N3—C91.474 (10)C10—H10B0.9700
C1—C21.380 (12)C11—H11A0.9700
C1—C61.492 (11)C11—H11B0.9700
C2—C31.391 (14)C12—C131.512 (13)
C2—H20.9300C12—H12A0.9700
C3—C41.352 (14)C12—H12B0.9700
C3—H30.9300C13—H13A0.9700
C4—C51.365 (13)C13—H13B0.9700
N2—Zn1—N173.5 (3)C6—C7—H7B109.5
N2—Zn1—N379.4 (3)H7A—C7—H7B109.5
N1—Zn1—N3151.0 (2)C6—C7—H7C109.5
N2—Zn1—Br1133.48 (18)H7A—C7—H7C109.5
N1—Zn1—Br192.70 (17)H7B—C7—H7C109.5
N3—Zn1—Br198.80 (16)N2—C8—C9108.2 (7)
N2—Zn1—Br2108.40 (19)N2—C8—H8A110.1
N1—Zn1—Br295.80 (18)C9—C8—H8A110.1
N3—Zn1—Br2102.32 (16)N2—C8—H8B110.1
Br1—Zn1—Br2117.20 (6)C9—C8—H8B110.1
C11—O1—C12108.1 (7)H8A—C8—H8B108.4
C5—N1—C1118.3 (8)N3—C9—C8113.6 (7)
C5—N1—Zn1128.4 (6)N3—C9—H9A108.8
C1—N1—Zn1113.1 (5)C8—C9—H9A108.8
C6—N2—C8123.3 (7)N3—C9—H9B108.8
C6—N2—Zn1121.2 (6)C8—C9—H9B108.8
C8—N2—Zn1115.2 (5)H9A—C9—H9B107.7
C10—N3—C13107.9 (7)N3—C10—C11112.0 (7)
C10—N3—C9108.4 (7)N3—C10—H10A109.2
C13—N3—C9108.8 (7)C11—C10—H10A109.2
C10—N3—Zn1115.9 (5)N3—C10—H10B109.2
C13—N3—Zn1115.9 (5)C11—C10—H10B109.2
C9—N3—Zn199.3 (5)H10A—C10—H10B107.9
N1—C1—C2120.6 (8)O1—C11—C10112.0 (8)
N1—C1—C6114.4 (7)O1—C11—H11A109.2
C2—C1—C6124.9 (8)C10—C11—H11A109.2
C1—C2—C3119.9 (9)O1—C11—H11B109.2
C1—C2—H2120.1C10—C11—H11B109.2
C3—C2—H2120.1H11A—C11—H11B107.9
C4—C3—C2118.7 (9)O1—C12—C13112.0 (8)
C4—C3—H3120.6O1—C12—H12A109.2
C2—C3—H3120.6C13—C12—H12A109.2
C3—C4—C5118.5 (9)O1—C12—H12B109.2
C3—C4—H4120.7C13—C12—H12B109.2
C5—C4—H4120.7H12A—C12—H12B107.9
N1—C5—C4123.9 (9)N3—C13—C12111.5 (8)
N1—C5—H5118.1N3—C13—H13A109.3
C4—C5—H5118.1C12—C13—H13A109.3
N2—C6—C1115.7 (7)N3—C13—H13B109.3
N2—C6—C7125.1 (8)C12—C13—H13B109.3
C1—C6—C7119.3 (8)H13A—C13—H13B108.0
C6—C7—H7A109.5
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