Literature DB >> 21522871

Bis[2-(benzyl-amino)-pyridine-κN]bis-(2-formyl-phenolato-κO,O')nickel(II).

Kouassi Ayikoé1, Ray J Butcher, Yilma Gultneh.   

Abstract

In the title complex, [Ni(C(7)H(5)O(2))(2)(C(12)H(12)N(2))(2)], the Ni(II) atom lies on a center of inversion and is coordinated in an octa-hedral geometry by two 2-(benzyl-amino)-pyridine (2-BAP) and two 2-formyl-phenolate ligands with the O-atom donors in the equatorial plane and the pyridine N atoms in axial positions. There are hydrogen-bonding inter-actions between the secondary amine H atom and the phenolate O atom, as well as C-H⋯O inter-actions, which result in the dihedral angle between the aromatic phenyl ring of the 2-formyl-phenolate moiety and the pyridine ring being 80.23 (4)°. In the packing, there are both C-H⋯π inter-actions, which link the mol-ecules into chains along the b axis, and offset π-π inter-actions involving both the pyridine and phenyl rings of the 2-BAP ligands [centroid-centroid distances = 4.0100 (8) Å for the pyridine rings and 3.6601 (8) and 4.8561 (8) Å for the phenyl rings].

Entities:  

Year:  2011        PMID: 21522871      PMCID: PMC3051610          DOI: 10.1107/S1600536811001425

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structures of similar octa­hedral nickel complexes, see: Assey et al. (2010a ▶,b ▶); Butcher et al. (2009 ▶); Gultneh et al. (2008 ▶). For bond-length data, Allen et al. (1987 ▶).

Experimental

Crystal data

[Ni(C7H5O2)2(C12H12N2)2] M = 669.40 Triclinic, a = 8.1747 (5) Å b = 9.3365 (5) Å c = 10.9183 (6) Å α = 73.926 (5)° β = 84.766 (5)° γ = 77.247 (5)° V = 780.58 (8) Å3 Z = 1 Mo Kα radiation μ = 0.67 mm−1 T = 110 K 0.47 × 0.41 × 0.35 mm

Data collection

Oxford Diffraction Xcalibur diffractometer with a Ruby detector Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009 ▶) T min = 0.932, T max = 1.000 9822 measured reflections 5136 independent reflections 4216 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.086 S = 1.05 5136 reflections 218 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.46 e Å−3 Δρmin = −0.27 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536811001425/zl2338sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811001425/zl2338Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C7H5O2)2(C12H12N2)2]Z = 1
Mr = 669.40F(000) = 350
Triclinic, P1Dx = 1.424 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.1747 (5) ÅCell parameters from 5541 reflections
b = 9.3365 (5) Åθ = 4.8–32.6°
c = 10.9183 (6) ŵ = 0.67 mm1
α = 73.926 (5)°T = 110 K
β = 84.766 (5)°Block, pale green
γ = 77.247 (5)°0.47 × 0.41 × 0.35 mm
V = 780.58 (8) Å3
Oxford Diffraction Xcalibur diffractometer with a Ruby (Gemini Mo) detector5136 independent reflections
Radiation source: Enhance (Mo) X-ray Source4216 reflections with I > 2σ(I)
graphiteRint = 0.025
Detector resolution: 10.5081 pixels mm-1θmax = 32.6°, θmin = 4.8°
ω scansh = −12→9
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009)k = −14→13
Tmin = 0.932, Tmax = 1.000l = −16→15
9822 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.086H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0457P)2] where P = (Fo2 + 2Fc2)/3
5136 reflections(Δ/σ)max < 0.001
218 parametersΔρmax = 0.46 e Å3
0 restraintsΔρmin = −0.27 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni0.50001.00000.50000.01289 (7)
O1A0.27528 (11)1.00213 (9)0.43885 (9)0.01507 (18)
O2A0.61193 (11)0.98245 (10)0.32627 (9)0.01674 (18)
C1A0.24508 (15)0.97081 (12)0.33607 (12)0.0140 (2)
C2A0.07923 (16)0.95941 (13)0.31617 (13)0.0172 (2)
H2AA−0.00680.97650.37820.021*
C3A0.04021 (17)0.92416 (14)0.20916 (14)0.0213 (3)
H3AA−0.07210.91840.19900.026*
C4A0.16279 (18)0.89655 (14)0.11473 (14)0.0221 (3)
H4AA0.13460.87130.04190.026*
C5A0.32436 (17)0.90699 (14)0.13020 (13)0.0190 (3)
H5AA0.40810.88850.06700.023*
C6A0.36945 (16)0.94477 (13)0.23829 (12)0.0150 (2)
C7A0.54127 (16)0.95393 (13)0.24225 (12)0.0172 (2)
H7A0.61060.93580.17120.021*
N1B0.55584 (13)0.75527 (11)0.56185 (10)0.0146 (2)
N2B0.28723 (13)0.72549 (12)0.63564 (11)0.0173 (2)
H2BN0.262 (2)0.8111 (19)0.6004 (18)0.026 (4)*
C1B0.71914 (16)0.69158 (14)0.54563 (13)0.0166 (2)
H1BA0.79370.75700.50590.020*
C2B0.78339 (16)0.53754 (14)0.58336 (13)0.0168 (2)
H2BA0.89980.49810.57290.020*
C3B0.67321 (16)0.44103 (13)0.63735 (12)0.0165 (2)
H3BA0.71340.33390.66210.020*
C4B0.50697 (16)0.50075 (13)0.65462 (12)0.0150 (2)
H4BA0.43100.43560.69150.018*
C5B0.44918 (15)0.66092 (13)0.61691 (12)0.0139 (2)
C6B0.16081 (15)0.63865 (14)0.69494 (13)0.0172 (2)
H6BA0.15470.56600.64530.021*
H6BB0.05030.70910.69120.021*
C7B0.19397 (15)0.55083 (14)0.83287 (13)0.0167 (2)
C8B0.26795 (17)0.60818 (16)0.91340 (14)0.0221 (3)
H8BA0.29800.70480.88220.027*
C9B0.29842 (19)0.52611 (18)1.03870 (15)0.0295 (3)
H9BA0.34820.56721.09290.035*
C10B0.25672 (19)0.38432 (18)1.08552 (15)0.0313 (3)
H10A0.27940.32751.17110.038*
C11B0.1819 (2)0.32658 (16)1.00657 (16)0.0294 (3)
H11A0.15150.23021.03830.035*
C12B0.15109 (17)0.40869 (15)0.88107 (14)0.0222 (3)
H12A0.10020.36770.82740.027*
U11U22U33U12U13U23
Ni0.01303 (11)0.01272 (11)0.01305 (12)−0.00388 (8)−0.00051 (8)−0.00262 (8)
O1A0.0149 (4)0.0147 (4)0.0160 (4)−0.0035 (3)−0.0011 (3)−0.0040 (3)
O2A0.0159 (4)0.0184 (4)0.0162 (5)−0.0050 (3)−0.0002 (3)−0.0040 (3)
C1A0.0162 (6)0.0083 (5)0.0158 (6)−0.0020 (4)−0.0039 (5)0.0001 (4)
C2A0.0148 (6)0.0146 (5)0.0212 (6)−0.0012 (5)−0.0035 (5)−0.0036 (5)
C3A0.0193 (6)0.0186 (6)0.0268 (7)−0.0031 (5)−0.0088 (5)−0.0055 (5)
C4A0.0286 (7)0.0193 (6)0.0191 (7)−0.0036 (5)−0.0097 (6)−0.0043 (5)
C5A0.0246 (7)0.0174 (5)0.0139 (6)−0.0046 (5)−0.0023 (5)−0.0017 (5)
C6A0.0177 (6)0.0123 (5)0.0144 (6)−0.0040 (5)−0.0018 (5)−0.0011 (4)
C7A0.0193 (6)0.0172 (5)0.0137 (6)−0.0048 (5)0.0009 (5)−0.0012 (5)
N1B0.0143 (5)0.0147 (4)0.0150 (5)−0.0045 (4)0.0000 (4)−0.0032 (4)
N2B0.0144 (5)0.0126 (5)0.0219 (6)−0.0035 (4)0.0008 (4)0.0005 (4)
C1B0.0155 (6)0.0175 (5)0.0179 (6)−0.0059 (5)0.0017 (5)−0.0050 (5)
C2B0.0139 (6)0.0184 (5)0.0174 (6)−0.0010 (5)0.0014 (5)−0.0060 (5)
C3B0.0207 (6)0.0136 (5)0.0143 (6)−0.0016 (5)−0.0009 (5)−0.0036 (4)
C4B0.0177 (6)0.0128 (5)0.0140 (6)−0.0047 (5)0.0002 (5)−0.0016 (4)
C5B0.0148 (5)0.0146 (5)0.0127 (6)−0.0042 (4)−0.0009 (4)−0.0032 (4)
C6B0.0141 (6)0.0182 (5)0.0197 (6)−0.0066 (5)0.0000 (5)−0.0032 (5)
C7B0.0132 (5)0.0170 (5)0.0188 (6)−0.0024 (5)0.0024 (5)−0.0043 (5)
C8B0.0208 (6)0.0264 (6)0.0209 (7)−0.0069 (5)0.0020 (5)−0.0086 (5)
C9B0.0260 (7)0.0431 (8)0.0207 (7)−0.0039 (7)−0.0005 (6)−0.0129 (7)
C10B0.0258 (7)0.0380 (8)0.0187 (7)0.0049 (6)0.0035 (6)0.0006 (6)
C11B0.0301 (8)0.0211 (6)0.0287 (8)−0.0029 (6)0.0079 (7)0.0023 (6)
C12B0.0216 (6)0.0186 (6)0.0253 (7)−0.0058 (5)0.0031 (6)−0.0040 (5)
Ni—O1A2.0052 (9)N2B—H2BN0.775 (17)
Ni—O1Ai2.0052 (9)C1B—C2B1.3755 (17)
Ni—O2A2.0618 (9)C1B—H1BA0.9500
Ni—O2Ai2.0618 (9)C2B—C3B1.3920 (17)
Ni—N1Bi2.1509 (10)C2B—H2BA0.9500
Ni—N1B2.1509 (10)C3B—C4B1.3676 (18)
O1A—C1A1.2923 (15)C3B—H3BA0.9500
O2A—C7A1.2434 (15)C4B—C5B1.4184 (16)
C1A—C2A1.4237 (17)C4B—H4BA0.9500
C1A—C6A1.4384 (18)C6B—C7B1.5187 (19)
C2A—C3A1.3793 (18)C6B—H6BA0.9900
C2A—H2AA0.9500C6B—H6BB0.9900
C3A—C4A1.406 (2)C7B—C8B1.3878 (18)
C3A—H3AA0.9500C7B—C12B1.3950 (17)
C4A—C5A1.3745 (19)C8B—C9B1.385 (2)
C4A—H4AA0.9500C8B—H8BA0.9500
C5A—C6A1.4214 (17)C9B—C10B1.387 (2)
C5A—H5AA0.9500C9B—H9BA0.9500
C6A—C7A1.4311 (18)C10B—C11B1.381 (2)
C7A—H7A0.9500C10B—H10A0.9500
N1B—C1B1.3534 (16)C11B—C12B1.387 (2)
N1B—C5B1.3594 (15)C11B—H11A0.9500
N2B—C5B1.3507 (16)C12B—H12A0.9500
N2B—C6B1.4497 (15)
O1A—Ni—O1Ai180.000 (1)C5B—N2B—H2BN114.7 (13)
O1A—Ni—O2A90.90 (4)C6B—N2B—H2BN120.9 (13)
O1Ai—Ni—O2A89.10 (4)N1B—C1B—C2B123.78 (11)
O1A—Ni—O2Ai89.10 (4)N1B—C1B—H1BA118.1
O1Ai—Ni—O2Ai90.90 (4)C2B—C1B—H1BA118.1
O2A—Ni—O2Ai180.000 (1)C1B—C2B—C3B118.18 (11)
O1A—Ni—N1Bi88.39 (4)C1B—C2B—H2BA120.9
O1Ai—Ni—N1Bi91.61 (4)C3B—C2B—H2BA120.9
O2A—Ni—N1Bi92.32 (4)C4B—C3B—C2B119.85 (11)
O2Ai—Ni—N1Bi87.68 (4)C4B—C3B—H3BA120.1
O1A—Ni—N1B91.61 (4)C2B—C3B—H3BA120.1
O1Ai—Ni—N1B88.39 (4)C3B—C4B—C5B119.29 (11)
O2A—Ni—N1B87.68 (4)C3B—C4B—H4BA120.4
O2Ai—Ni—N1B92.32 (4)C5B—C4B—H4BA120.4
N1Bi—Ni—N1B180.00 (6)N2B—C5B—N1B117.55 (10)
C1A—O1A—Ni127.16 (8)N2B—C5B—C4B121.45 (11)
C7A—O2A—Ni123.83 (8)N1B—C5B—C4B120.99 (11)
O1A—C1A—C2A119.19 (11)N2B—C6B—C7B113.76 (10)
O1A—C1A—C6A124.31 (11)N2B—C6B—H6BA108.8
C2A—C1A—C6A116.50 (11)C7B—C6B—H6BA108.8
C3A—C2A—C1A121.71 (12)N2B—C6B—H6BB108.8
C3A—C2A—H2AA119.1C7B—C6B—H6BB108.8
C1A—C2A—H2AA119.1H6BA—C6B—H6BB107.7
C2A—C3A—C4A121.58 (12)C8B—C7B—C12B118.46 (13)
C2A—C3A—H3AA119.2C8B—C7B—C6B121.46 (11)
C4A—C3A—H3AA119.2C12B—C7B—C6B120.08 (12)
C5A—C4A—C3A118.48 (12)C9B—C8B—C7B120.72 (13)
C5A—C4A—H4AA120.8C9B—C8B—H8BA119.6
C3A—C4A—H4AA120.8C7B—C8B—H8BA119.6
C4A—C5A—C6A121.73 (12)C8B—C9B—C10B120.44 (14)
C4A—C5A—H5AA119.1C8B—C9B—H9BA119.8
C6A—C5A—H5AA119.1C10B—C9B—H9BA119.8
C5A—C6A—C7A116.26 (12)C11B—C10B—C9B119.35 (15)
C5A—C6A—C1A119.98 (11)C11B—C10B—H10A120.3
C7A—C6A—C1A123.76 (12)C9B—C10B—H10A120.3
O2A—C7A—C6A128.67 (12)C10B—C11B—C12B120.30 (13)
O2A—C7A—H7A115.7C10B—C11B—H11A119.9
C6A—C7A—H7A115.7C12B—C11B—H11A119.9
C1B—N1B—C5B117.88 (10)C11B—C12B—C7B120.72 (13)
C1B—N1B—Ni114.15 (8)C11B—C12B—H12A119.6
C5B—N1B—Ni127.95 (8)C7B—C12B—H12A119.6
C5B—N2B—C6B123.33 (10)
O2A—Ni—O1A—C1A11.63 (9)O1A—Ni—N1B—C5B−37.62 (10)
O2Ai—Ni—O1A—C1A−168.37 (9)O1Ai—Ni—N1B—C5B142.38 (10)
N1Bi—Ni—O1A—C1A103.93 (9)O2A—Ni—N1B—C5B−128.46 (10)
N1B—Ni—O1A—C1A−76.07 (9)O2Ai—Ni—N1B—C5B51.54 (10)
O1A—Ni—O2A—C7A−11.59 (10)C5B—N1B—C1B—C2B−1.03 (19)
O1Ai—Ni—O2A—C7A168.41 (10)Ni—N1B—C1B—C2B177.25 (10)
N1Bi—Ni—O2A—C7A−100.02 (10)N1B—C1B—C2B—C3B2.3 (2)
N1B—Ni—O2A—C7A79.98 (10)C1B—C2B—C3B—C4B−1.76 (19)
Ni—O1A—C1A—C2A172.05 (8)C2B—C3B—C4B—C5B0.07 (19)
Ni—O1A—C1A—C6A−7.43 (16)C6B—N2B—C5B—N1B−179.07 (11)
O1A—C1A—C2A—C3A−179.07 (11)C6B—N2B—C5B—C4B0.13 (19)
C6A—C1A—C2A—C3A0.45 (18)C1B—N1B—C5B—N2B178.42 (12)
C1A—C2A—C3A—C4A0.5 (2)Ni—N1B—C5B—N2B0.40 (16)
C2A—C3A—C4A—C5A−0.71 (19)C1B—N1B—C5B—C4B−0.78 (17)
C3A—C4A—C5A—C6A−0.05 (19)Ni—N1B—C5B—C4B−178.80 (9)
C4A—C5A—C6A—C7A−179.21 (12)C3B—C4B—C5B—N2B−177.92 (12)
C4A—C5A—C6A—C1A1.01 (19)C3B—C4B—C5B—N1B1.25 (18)
O1A—C1A—C6A—C5A178.32 (10)C5B—N2B—C6B—C7B63.67 (16)
C2A—C1A—C6A—C5A−1.18 (17)N2B—C6B—C7B—C8B34.66 (16)
O1A—C1A—C6A—C7A−1.45 (19)N2B—C6B—C7B—C12B−144.86 (12)
C2A—C1A—C6A—C7A179.06 (11)C12B—C7B—C8B—C9B0.0 (2)
Ni—O2A—C7A—C6A7.87 (18)C6B—C7B—C8B—C9B−179.53 (12)
C5A—C6A—C7A—O2A−178.85 (12)C7B—C8B—C9B—C10B0.6 (2)
C1A—C6A—C7A—O2A0.9 (2)C8B—C9B—C10B—C11B−1.0 (2)
O1A—Ni—N1B—C1B144.30 (9)C9B—C10B—C11B—C12B0.9 (2)
O1Ai—Ni—N1B—C1B−35.70 (9)C10B—C11B—C12B—C7B−0.4 (2)
O2A—Ni—N1B—C1B53.46 (9)C8B—C7B—C12B—C11B−0.1 (2)
O2Ai—Ni—N1B—C1B−126.54 (9)C6B—C7B—C12B—C11B179.45 (12)
Cg4 is the centroid of the C1A–C6A ring.
D—H···AD—HH···AD···AD—H···A
N2B—H2BN···O1A0.775 (17)2.147 (18)2.8550 (14)152.0 (17)
C1B—H1BA···O1Ai0.952.422.9216 (14)113
C3B—H3BA···Cg4ii0.952.443.3674 (14)166
C11B—H11A···Cg4iii0.952.913.7535 (17)148
Table 1

Hydrogen-bond geometry (Å, °)

Cg4 is the centroid of the C1A–C6A ring.

D—H⋯AD—HH⋯ADAD—H⋯A
N2B—H2BN⋯O1A0.775 (17)2.147 (18)2.8550 (14)152.0 (17)
C1B—H1BA⋯O1Ai0.952.422.9216 (14)113
C3B—H3BACg4ii0.952.443.3674 (14)166
C11B—H11ACg4iii0.952.913.7535 (17)148

Symmetry codes: (i) ; (ii) ; (iii) .

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