| Literature DB >> 21522794 |
Anton V Dolzhenko, Geok Kheng Tan, Anna V Dolzhenko, Lip Lin Koh, Wai Keung Chui.
Abstract
In the title compound, C(10)H(12)N(6)·C(2)H(5)OH, the planarity of the heterocyclic system is slightly distorted at the triazine ring (r.m.s. deviation = 0.1191 Å), which adopts a conformation best described as inter-mediate between a flattened twisted boat and a half-boat with the tertiary Csp(3) atom at the bow. In the crystal, mol-ecules form centrosymmetric dimers connected by N⋯H-O and O⋯H-N hydrogen bonds between the amino group H atom, the ethanol solvent mol-ecule and the triazine N atom, making an R(4) (4)(12) graph-set motif. The other H atom of the amino group and the H atom on the endocyclic N atom form N⋯H-N hydrogen bonds with the N atoms of the pyrazole and pyridine rings, respectively, linking the mol-ecules into C(7)C(7) chains with the R(2) (2)(8) binary graph-set motif running along [010].Entities:
Year: 2010 PMID: 21522794 PMCID: PMC3050164 DOI: 10.1107/S160053681005097X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H12N6·C2H6O | |
| Monoclinic, | Melting point: 559 K |
| Hall symbol: -C 2yc | Mo |
| Cell parameters from 782 reflections | |
| θ = 2.7–27.3° | |
| µ = 0.09 mm−1 | |
| β = 101.683 (4)° | |
| Plate, yellow | |
| 0.60 × 0.38 × 0.10 mm |
| Bruker SMART APEX CCD diffractometer | 3129 independent reflections |
| Radiation source: fine-focus sealed tube | 2657 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.5°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 9471 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3129 reflections | (Δ/σ)max = 0.001 |
| 209 parameters | Δρmax = 0.37 e Å−3 |
| 38 restraints | Δρmin = −0.21 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| O1S | 0.49619 (10) | 0.11324 (8) | 0.46397 (7) | 0.0285 (3) | |
| H1S | 0.5246 (18) | 0.1117 (15) | 0.5165 (14) | 0.039 (6)* | |
| C1S | 0.5838 (2) | 0.0860 (2) | 0.42339 (15) | 0.0384 (7) | 0.781 (6) |
| H1SA | 0.5526 | 0.0769 | 0.3640 | 0.046* | 0.781 (6) |
| H1SB | 0.6169 | 0.0243 | 0.4461 | 0.046* | 0.781 (6) |
| C2S | 0.6736 (3) | 0.1618 (3) | 0.4346 (2) | 0.0648 (11) | 0.781 (6) |
| H2SA | 0.7335 | 0.1420 | 0.4063 | 0.097* | 0.781 (6) |
| H2SB | 0.7051 | 0.1701 | 0.4934 | 0.097* | 0.781 (6) |
| H2SC | 0.6410 | 0.2226 | 0.4114 | 0.097* | 0.781 (6) |
| C1SA | 0.5898 (9) | 0.1503 (9) | 0.4290 (6) | 0.044 (2) | 0.219 (6) |
| H1SC | 0.5651 | 0.1572 | 0.3687 | 0.053* | 0.219 (6) |
| H1SD | 0.6120 | 0.2146 | 0.4523 | 0.053* | 0.219 (6) |
| C2SA | 0.6822 (14) | 0.0883 (12) | 0.4464 (9) | 0.077 (4) | 0.219 (6) |
| H2SD | 0.7437 | 0.1142 | 0.4227 | 0.116* | 0.219 (6) |
| H2SE | 0.6605 | 0.0250 | 0.4226 | 0.116* | 0.219 (6) |
| H2SF | 0.7072 | 0.0823 | 0.5062 | 0.116* | 0.219 (6) |
| N1 | 0.56023 (10) | 0.47488 (8) | 0.67409 (7) | 0.0203 (3) | |
| N2 | 0.67666 (10) | 0.34962 (9) | 0.74160 (7) | 0.0205 (3) | |
| N3 | 0.68205 (10) | 0.25362 (8) | 0.72312 (7) | 0.0187 (3) | |
| N4 | 0.59745 (10) | 0.13025 (8) | 0.63025 (7) | 0.0208 (3) | |
| N5 | 0.77009 (11) | 0.10579 (9) | 0.72296 (8) | 0.0220 (3) | |
| H5 | 0.8212 (17) | 0.0662 (15) | 0.7465 (12) | 0.034 (5)* | |
| N6 | 0.68817 (13) | −0.01616 (10) | 0.63779 (9) | 0.0302 (3) | |
| H6A | 0.6334 (17) | −0.0354 (14) | 0.6007 (12) | 0.028 (5)* | |
| H6B | 0.7326 (17) | −0.0588 (15) | 0.6701 (12) | 0.037 (5)* | |
| C1 | 0.47528 (13) | 0.49206 (10) | 0.61227 (9) | 0.0226 (3) | |
| H1 | 0.4479 | 0.5562 | 0.6059 | 0.027* | |
| C2 | 0.42132 (13) | 0.42321 (11) | 0.55453 (9) | 0.0235 (3) | |
| H2 | 0.3604 | 0.4420 | 0.5119 | 0.028* | |
| C3 | 0.45708 (12) | 0.32946 (11) | 0.56021 (9) | 0.0211 (3) | |
| H3 | 0.4242 | 0.2824 | 0.5212 | 0.025* | |
| C4 | 0.54476 (12) | 0.30661 (10) | 0.62667 (8) | 0.0182 (3) | |
| C5 | 0.59298 (12) | 0.38088 (10) | 0.68156 (8) | 0.0180 (3) | |
| C6 | 0.60627 (12) | 0.22357 (10) | 0.65668 (8) | 0.0189 (3) | |
| C7 | 0.68259 (13) | 0.07377 (11) | 0.66450 (9) | 0.0220 (3) | |
| C8 | 0.75702 (12) | 0.18664 (10) | 0.77658 (8) | 0.0210 (3) | |
| C9 | 0.70180 (17) | 0.15481 (14) | 0.84683 (10) | 0.0384 (4) | |
| H9A | 0.6953 | 0.2100 | 0.8823 | 0.058* | |
| H9B | 0.7480 | 0.1049 | 0.8791 | 0.058* | |
| H9C | 0.6266 | 0.1291 | 0.8243 | 0.058* | |
| C10 | 0.87144 (15) | 0.23234 (12) | 0.80702 (12) | 0.0363 (4) | |
| H10A | 0.8983 | 0.2606 | 0.7604 | 0.055* | |
| H10B | 0.9249 | 0.1832 | 0.8332 | 0.055* | |
| H10C | 0.8651 | 0.2827 | 0.8471 | 0.055* |
| O1S | 0.0298 (6) | 0.0327 (6) | 0.0198 (6) | 0.0020 (5) | −0.0023 (5) | −0.0027 (4) |
| C1S | 0.0441 (15) | 0.0418 (17) | 0.0304 (12) | 0.0038 (12) | 0.0104 (10) | −0.0026 (11) |
| C2S | 0.050 (2) | 0.101 (3) | 0.0473 (17) | −0.0189 (19) | 0.0193 (14) | 0.0019 (18) |
| C1SA | 0.044 (5) | 0.049 (6) | 0.040 (4) | −0.019 (4) | 0.008 (4) | 0.007 (4) |
| C2SA | 0.089 (8) | 0.077 (8) | 0.069 (7) | 0.018 (6) | 0.021 (6) | 0.022 (6) |
| N1 | 0.0230 (6) | 0.0168 (6) | 0.0203 (6) | −0.0004 (5) | 0.0025 (5) | 0.0008 (5) |
| N2 | 0.0230 (6) | 0.0159 (6) | 0.0205 (6) | 0.0006 (5) | −0.0001 (5) | −0.0021 (5) |
| N3 | 0.0195 (6) | 0.0158 (6) | 0.0184 (6) | 0.0010 (4) | −0.0016 (5) | −0.0014 (4) |
| N4 | 0.0233 (6) | 0.0164 (6) | 0.0192 (6) | 0.0016 (5) | −0.0042 (5) | −0.0017 (4) |
| N5 | 0.0227 (6) | 0.0180 (6) | 0.0217 (6) | 0.0050 (5) | −0.0042 (5) | −0.0022 (5) |
| N6 | 0.0356 (8) | 0.0196 (7) | 0.0273 (7) | 0.0063 (6) | −0.0128 (6) | −0.0040 (5) |
| C1 | 0.0255 (8) | 0.0178 (7) | 0.0235 (7) | 0.0024 (6) | 0.0027 (6) | 0.0018 (6) |
| C2 | 0.0234 (7) | 0.0232 (7) | 0.0209 (7) | 0.0015 (6) | −0.0028 (6) | 0.0024 (6) |
| C3 | 0.0223 (7) | 0.0213 (7) | 0.0177 (7) | −0.0012 (5) | −0.0002 (5) | −0.0009 (5) |
| C4 | 0.0190 (7) | 0.0170 (7) | 0.0183 (7) | −0.0008 (5) | 0.0029 (5) | −0.0004 (5) |
| C5 | 0.0173 (6) | 0.0190 (7) | 0.0177 (6) | −0.0011 (5) | 0.0033 (5) | 0.0001 (5) |
| C6 | 0.0185 (7) | 0.0209 (7) | 0.0158 (6) | −0.0005 (5) | 0.0003 (5) | 0.0001 (5) |
| C7 | 0.0254 (7) | 0.0201 (7) | 0.0182 (7) | 0.0013 (6) | −0.0011 (6) | −0.0004 (5) |
| C8 | 0.0226 (7) | 0.0194 (7) | 0.0179 (7) | 0.0046 (5) | −0.0031 (6) | −0.0015 (5) |
| C9 | 0.0475 (11) | 0.0425 (10) | 0.0257 (8) | 0.0202 (8) | 0.0088 (8) | 0.0115 (7) |
| C10 | 0.0286 (9) | 0.0244 (8) | 0.0466 (10) | 0.0042 (7) | −0.0146 (8) | −0.0081 (7) |
| O1S—C1S | 1.420 (3) | N5—C7 | 1.3596 (18) |
| O1S—C1SA | 1.469 (9) | N5—C8 | 1.4628 (19) |
| O1S—H1S | 0.87 (2) | N5—H5 | 0.86 (2) |
| C1S—C2S | 1.500 (5) | N6—C7 | 1.334 (2) |
| C1S—H1SA | 0.9900 | N6—H6A | 0.85 (2) |
| C1S—H1SB | 0.9900 | N6—H6B | 0.90 (2) |
| C2S—H2SA | 0.9800 | C1—C2 | 1.418 (2) |
| C2S—H2SB | 0.9800 | C1—H1 | 0.9500 |
| C2S—H2SC | 0.9800 | C2—C3 | 1.372 (2) |
| C1SA—C2SA | 1.40 (2) | C2—H2 | 0.9500 |
| C1SA—H1SC | 0.9900 | C3—C4 | 1.4047 (19) |
| C1SA—H1SD | 0.9900 | C3—H3 | 0.9500 |
| C2SA—H2SD | 0.9800 | C4—C6 | 1.410 (2) |
| C2SA—H2SE | 0.9800 | C4—C5 | 1.4227 (19) |
| C2SA—H2SF | 0.9800 | C8—C10 | 1.517 (2) |
| N1—C1 | 1.3202 (19) | C8—C9 | 1.523 (2) |
| N1—C5 | 1.3651 (18) | C9—H9A | 0.9800 |
| N2—C5 | 1.3425 (18) | C9—H9B | 0.9800 |
| N2—N3 | 1.3749 (17) | C9—H9C | 0.9800 |
| N3—C6 | 1.3508 (17) | C10—H10A | 0.9800 |
| N3—C8 | 1.4682 (18) | C10—H10B | 0.9800 |
| N4—C7 | 1.3299 (19) | C10—H10C | 0.9800 |
| N4—C6 | 1.3678 (18) | ||
| C1S—O1S—C1SA | 36.3 (5) | N1—C1—C2 | 125.71 (14) |
| C1S—O1S—H1S | 106.7 (14) | N1—C1—H1 | 117.1 |
| C1SA—O1S—H1S | 102.9 (14) | C2—C1—H1 | 117.1 |
| O1S—C1S—C2S | 110.4 (3) | C3—C2—C1 | 119.98 (13) |
| O1S—C1S—H1SA | 109.6 | C3—C2—H2 | 120.0 |
| C2S—C1S—H1SA | 109.6 | C1—C2—H2 | 120.0 |
| O1S—C1S—H1SB | 109.6 | C2—C3—C4 | 116.60 (13) |
| C2S—C1S—H1SB | 109.6 | C2—C3—H3 | 121.7 |
| H1SA—C1S—H1SB | 108.1 | C4—C3—H3 | 121.7 |
| C1S—C2S—H2SA | 109.5 | C3—C4—C6 | 136.46 (13) |
| C1S—C2S—H2SB | 109.5 | C3—C4—C5 | 119.08 (13) |
| H2SA—C2S—H2SB | 109.5 | C6—C4—C5 | 104.45 (12) |
| C1S—C2S—H2SC | 109.5 | N2—C5—N1 | 122.69 (12) |
| H2SA—C2S—H2SC | 109.5 | N2—C5—C4 | 113.00 (12) |
| H2SB—C2S—H2SC | 109.5 | N1—C5—C4 | 124.30 (13) |
| C2SA—C1SA—O1S | 110.6 (11) | N3—C6—N4 | 123.49 (12) |
| C2SA—C1SA—H1SC | 109.5 | N3—C6—C4 | 104.98 (12) |
| O1S—C1SA—H1SC | 109.5 | N4—C6—C4 | 131.53 (13) |
| C2SA—C1SA—H1SD | 109.5 | N4—C7—N6 | 119.96 (13) |
| O1S—C1SA—H1SD | 109.5 | N4—C7—N5 | 122.51 (14) |
| H1SC—C1SA—H1SD | 108.1 | N6—C7—N5 | 117.38 (13) |
| C1SA—C2SA—H2SD | 109.5 | N5—C8—N3 | 104.50 (11) |
| C1SA—C2SA—H2SE | 109.5 | N5—C8—C10 | 108.70 (13) |
| H2SD—C2SA—H2SE | 109.5 | N3—C8—C10 | 110.36 (13) |
| C1SA—C2SA—H2SF | 109.5 | N5—C8—C9 | 111.15 (13) |
| H2SD—C2SA—H2SF | 109.5 | N3—C8—C9 | 109.45 (12) |
| H2SE—C2SA—H2SF | 109.5 | C10—C8—C9 | 112.40 (14) |
| C1—N1—C5 | 114.26 (12) | C8—C9—H9A | 109.5 |
| C5—N2—N3 | 102.25 (11) | C8—C9—H9B | 109.5 |
| C6—N3—N2 | 115.31 (11) | H9A—C9—H9B | 109.5 |
| C6—N3—C8 | 122.17 (12) | C8—C9—H9C | 109.5 |
| N2—N3—C8 | 122.23 (11) | H9A—C9—H9C | 109.5 |
| C7—N4—C6 | 114.85 (12) | H9B—C9—H9C | 109.5 |
| C7—N5—C8 | 121.41 (12) | C8—C10—H10A | 109.5 |
| C7—N5—H5 | 120.0 (13) | C8—C10—H10B | 109.5 |
| C8—N5—H5 | 111.9 (13) | H10A—C10—H10B | 109.5 |
| C7—N6—H6A | 116.8 (13) | C8—C10—H10C | 109.5 |
| C7—N6—H6B | 118.9 (13) | H10A—C10—H10C | 109.5 |
| H6A—N6—H6B | 120.5 (18) | H10B—C10—H10C | 109.5 |
| C1SA—O1S—C1S—C2S | 21.3 (7) | C8—N3—C6—C4 | 174.81 (13) |
| C1S—O1S—C1SA—C2SA | −39.4 (9) | C7—N4—C6—N3 | −12.5 (2) |
| C5—N2—N3—C6 | −1.02 (16) | C7—N4—C6—C4 | 168.49 (15) |
| C5—N2—N3—C8 | −175.06 (13) | C3—C4—C6—N3 | 178.26 (17) |
| C5—N1—C1—C2 | −2.2 (2) | C5—C4—C6—N3 | −0.17 (15) |
| N1—C1—C2—C3 | −0.2 (2) | C3—C4—C6—N4 | −2.6 (3) |
| C1—C2—C3—C4 | 2.3 (2) | C5—C4—C6—N4 | 178.95 (15) |
| C2—C3—C4—C6 | 179.72 (16) | C6—N4—C7—N6 | −173.68 (14) |
| C2—C3—C4—C5 | −2.0 (2) | C6—N4—C7—N5 | 1.7 (2) |
| N3—N2—C5—N1 | −177.97 (13) | C8—N5—C7—N4 | 26.4 (2) |
| N3—N2—C5—C4 | 0.87 (16) | C8—N5—C7—N6 | −158.08 (14) |
| C1—N1—C5—N2 | −178.85 (14) | C7—N5—C8—N3 | −37.89 (18) |
| C1—N1—C5—C4 | 2.4 (2) | C7—N5—C8—C10 | −155.73 (14) |
| C3—C4—C5—N2 | −179.23 (13) | C7—N5—C8—C9 | 80.06 (17) |
| C6—C4—C5—N2 | −0.46 (17) | C6—N3—C8—N5 | 27.26 (18) |
| C3—C4—C5—N1 | −0.4 (2) | N2—N3—C8—N5 | −159.11 (12) |
| C6—C4—C5—N1 | 178.35 (13) | C6—N3—C8—C10 | 143.94 (14) |
| N2—N3—C6—N4 | −178.45 (13) | N2—N3—C8—C10 | −42.42 (19) |
| C8—N3—C6—N4 | −4.4 (2) | C6—N3—C8—C9 | −91.86 (17) |
| N2—N3—C6—C4 | 0.77 (17) | N2—N3—C8—C9 | 81.78 (17) |
| H··· | ||||
| N5—H5···N1i | 0.86 (2) | 2.16 (2) | 3.0077 (18) | 169.5 (18) |
| N6—H6B···N2i | 0.90 (2) | 2.08 (2) | 2.9754 (18) | 171.5 (18) |
| N6—H6A···O1Sii | 0.85 (2) | 2.03 (2) | 2.8540 (18) | 163.2 (18) |
| O1S—H1S···N4 | 0.87 (2) | 1.93 (2) | 2.7943 (17) | 170 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N5—H5⋯N1i | 0.86 (2) | 2.16 (2) | 3.0077 (18) | 169.5 (18) |
| N6—H6 | 0.90 (2) | 2.08 (2) | 2.9754 (18) | 171.5 (18) |
| N6—H6 | 0.85 (2) | 2.03 (2) | 2.8540 (18) | 163.2 (18) |
| O1 | 0.87 (2) | 1.93 (2) | 2.7943 (17) | 170 (2) |
Symmetry codes: (i) ; (ii) .