Literature DB >> 21522765

N,N'-Diphenyl-thio-urea acetone monosolvate.

Andrzej Okuniewski1, Jaroslaw Chojnacki, Barbara Becker.   

Abstract

In the title compound, C(13)H(12)N(2)S·C(3)H(6)O, the phenyl rings of the thio-urea mol-ecule are in syn and anti positions in relation to the C=S bond. Two mol-ecules are connected by N-H⋯S=C hydrogen bonds into a centrosymmetric dimer. An additional N-H⋯O=C hydrogen bond to the acetone solvent mol-ecule and some weak C-H⋯π inter-actions reinforce the crystal structure.

Entities:  

Year:  2010        PMID: 21522765      PMCID: PMC3050175          DOI: 10.1107/S1600536810050300

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the unsolvated N,N′-diphenyl­thio­urea stereoisomers, see: Ramnathan et al. (1995 ▶); Peseke et al. (1999 ▶). For the syn-syn-N,N′-diphenyl­thio­urea–dicyclo­hexyl-18-crown-6 co-crystal, see: Fonari et al. (2005 ▶). For related structures, see: Bowmaker et al. (2009 ▶); Okuniewski et al. (2010 ▶); Shen & Xu (2004 ▶).

Experimental

Crystal data

C13H12N2S·C3H6O M = 286.38 Orthorhombic, a = 17.1797 (6) Å b = 10.0736 (4) Å c = 17.4700 (7) Å V = 3023.4 (2) Å3 Z = 8 Mo Kα radiation μ = 0.21 mm−1 T = 150 K 0.46 × 0.41 × 0.27 mm

Data collection

Oxford Diffraction Xcalibur Sapphire2 diffractometer Absorption correction: analytical (CrysAlis PRO; Oxford Diffraction, 2009 ▶) T min = 0.777, T max = 0.819 7549 measured reflections 3245 independent reflections 2278 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.092 S = 0.94 3245 reflections 191 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.32 e Å−3 Δρmin = −0.21 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: OLEX2 (Dolomanov et al., 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810050300/ng5077sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810050300/ng5077Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H12N2S·C3H6ODx = 1.258 Mg m3
Mr = 286.38Melting point: 154(1) K
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 3367 reflections
a = 17.1797 (6) Åθ = 2.3–28.7°
b = 10.0736 (4) ŵ = 0.21 mm1
c = 17.4700 (7) ÅT = 150 K
V = 3023.4 (2) Å3Prism, clear colourless
Z = 80.46 × 0.41 × 0.27 mm
F(000) = 1216
Oxford Diffraction Xcalibur Sapphire2 diffractometer3245 independent reflections
Radiation source: fine-focus sealed tube2278 reflections with I > 2σ(I)
graphiteRint = 0.025
Detector resolution: 8.1883 pixels mm-1θmax = 27°, θmin = 2.6°
ω scansh = −9→21
Absorption correction: analytical (CrysAlis PRO; Oxford Diffraction, 2009)k = −7→12
Tmin = 0.777, Tmax = 0.819l = −22→17
7549 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.092H atoms treated by a mixture of independent and constrained refinement
S = 0.94w = 1/[σ2(Fo2) + (0.054P)2] where P = (Fo2 + 2Fc2)/3
3245 reflections(Δ/σ)max = 0.001
191 parametersΔρmax = 0.32 e Å3
2 restraintsΔρmin = −0.21 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.The phenyl rings centroids: Cg1 is the centroid of ring {C11,..,C16}: 0.22445 (4), 0.73429 (8), 0.46519 (4); Cg2 is the centroid of ring {C21,..,C26}: 0.06414 (4), 0.39968 (8), 0.17172 (4). Distance calculations were done using PLATON (Spek, 2009).
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S11.00623 (2)0.60332 (4)0.60875 (2)0.02588 (12)
N10.90820 (7)0.42124 (13)0.56131 (7)0.0227 (3)
H10.9367 (8)0.4256 (17)0.5206 (7)0.033 (5)*
N20.89857 (8)0.47225 (14)0.68979 (7)0.0245 (3)
H20.8677 (9)0.4042 (13)0.6956 (10)0.040 (5)*
C10.93269 (8)0.49352 (16)0.62170 (8)0.0219 (3)
C110.84080 (9)0.34076 (16)0.55234 (8)0.0238 (3)
C120.84703 (10)0.23117 (18)0.50489 (8)0.0292 (4)
H120.89630.2070.48460.035*
C130.78192 (11)0.1567 (2)0.48687 (10)0.0389 (5)
H130.78640.08190.4540.047*
C140.71028 (11)0.1916 (2)0.51682 (10)0.0406 (5)
H140.66530.14140.50420.049*
C150.70426 (9)0.2990 (2)0.56486 (10)0.0358 (4)
H150.6550.32150.5860.043*
C160.76902 (9)0.37509 (18)0.58304 (9)0.0291 (4)
H160.76430.44960.6160.035*
C210.91899 (8)0.53867 (17)0.75969 (8)0.0238 (4)
C220.91081 (9)0.67464 (17)0.76642 (9)0.0285 (4)
H220.89340.72560.7240.034*
C230.92812 (10)0.73653 (19)0.83536 (10)0.0350 (4)
H230.92290.83010.840.042*
C240.95281 (10)0.6625 (2)0.89701 (9)0.0376 (5)
H240.96450.70480.94420.045*
C250.96061 (11)0.5259 (2)0.88998 (9)0.0371 (5)
H250.97750.47490.93260.045*
C260.94387 (9)0.46364 (19)0.82118 (8)0.0305 (4)
H260.94950.37020.81640.037*
O10.79841 (7)0.27541 (12)0.76020 (7)0.0398 (3)
C1A0.80931 (9)0.15731 (18)0.76927 (9)0.0273 (4)
C20.85919 (11)0.0803 (2)0.71495 (9)0.0404 (5)
H2A0.85560.11960.66380.061*
H2B0.8413−0.0120.71310.061*
H2C0.91340.08290.73240.061*
C30.77585 (10)0.08360 (18)0.83558 (9)0.0328 (4)
H3A0.74080.14220.86420.049*
H3B0.8180.05380.86920.049*
H3C0.74670.00640.81690.049*
U11U22U33U12U13U23
S10.0267 (2)0.0296 (2)0.0214 (2)−0.00829 (19)0.00224 (15)−0.00198 (18)
N10.0218 (6)0.0268 (8)0.0194 (6)−0.0039 (6)0.0019 (5)−0.0024 (6)
N20.0279 (7)0.0255 (8)0.0200 (6)−0.0065 (6)0.0023 (5)0.0005 (6)
C10.0222 (7)0.0213 (8)0.0222 (7)0.0028 (7)−0.0004 (6)0.0007 (7)
C110.0266 (8)0.0249 (9)0.0199 (7)−0.0051 (7)−0.0018 (6)0.0039 (7)
C120.0336 (8)0.0284 (10)0.0257 (8)−0.0036 (8)−0.0011 (7)−0.0001 (8)
C130.0503 (11)0.0336 (11)0.0329 (9)−0.0142 (9)−0.0068 (8)−0.0030 (9)
C140.0400 (10)0.0423 (12)0.0394 (10)−0.0205 (10)−0.0102 (8)0.0107 (10)
C150.0253 (8)0.0433 (12)0.0388 (10)−0.0074 (8)0.0000 (7)0.0113 (9)
C160.0268 (8)0.0315 (10)0.0289 (8)−0.0016 (8)0.0002 (6)0.0014 (8)
C210.0215 (7)0.0304 (9)0.0196 (7)−0.0055 (7)0.0036 (6)−0.0007 (7)
C220.0311 (9)0.0295 (10)0.0250 (8)0.0003 (8)0.0013 (6)−0.0004 (8)
C230.0344 (9)0.0341 (10)0.0364 (9)−0.0039 (8)0.0050 (7)−0.0106 (8)
C240.0355 (10)0.0542 (13)0.0230 (8)−0.0118 (10)0.0016 (7)−0.0090 (9)
C250.0400 (10)0.0494 (12)0.0219 (8)−0.0137 (10)−0.0030 (7)0.0092 (9)
C260.0330 (9)0.0323 (10)0.0264 (8)−0.0075 (8)−0.0011 (7)0.0044 (8)
O10.0481 (8)0.0297 (7)0.0416 (7)−0.0060 (6)0.0094 (6)0.0028 (6)
C1A0.0249 (8)0.0307 (10)0.0263 (8)−0.0053 (8)−0.0050 (6)−0.0019 (8)
C20.0403 (10)0.0517 (13)0.0292 (9)0.0064 (10)−0.0015 (7)−0.0017 (9)
C30.0304 (9)0.0352 (11)0.0329 (9)−0.0052 (8)−0.0004 (7)0.0065 (8)
S1—C11.6943 (16)C21—C221.382 (2)
N1—C11.3492 (18)C22—C231.388 (2)
N1—C111.4221 (19)C22—H220.95
N1—H10.865 (9)C23—C241.377 (3)
N2—C11.3433 (18)C23—H230.95
N2—C211.4359 (19)C24—C251.387 (3)
N2—H20.873 (9)C24—H240.95
C11—C121.385 (2)C25—C261.386 (2)
C11—C161.389 (2)C25—H250.95
C12—C131.383 (2)C26—H260.95
C12—H120.95O1—C1A1.215 (2)
C13—C141.383 (3)C1A—C31.491 (2)
C13—H130.95C1A—C21.495 (2)
C14—C151.373 (3)C2—H2A0.98
C14—H140.95C2—H2B0.98
C15—C161.388 (2)C2—H2C0.98
C15—H150.95C3—H3A0.98
C16—H160.95C3—H3B0.98
C21—C261.381 (2)C3—H3C0.98
C1—N1—C11130.37 (13)C21—C22—C23119.81 (16)
C1—N1—H1116.0 (11)C21—C22—H22120.1
C11—N1—H1113.6 (11)C23—C22—H22120.1
C1—N2—C21124.89 (14)C24—C23—C22120.07 (18)
C1—N2—H2119.5 (12)C24—C23—H23120
C21—N2—H2114.6 (11)C22—C23—H23120
N2—C1—N1118.05 (14)C23—C24—C25119.85 (16)
N2—C1—S1123.22 (11)C23—C24—H24120.1
N1—C1—S1118.71 (11)C25—C24—H24120.1
C12—C11—C16119.89 (15)C26—C25—C24120.37 (17)
C12—C11—N1117.23 (14)C26—C25—H25119.8
C16—C11—N1122.59 (15)C24—C25—H25119.8
C13—C12—C11120.40 (16)C21—C26—C25119.40 (17)
C13—C12—H12119.8C21—C26—H26120.3
C11—C12—H12119.8C25—C26—H26120.3
C14—C13—C12119.74 (18)O1—C1A—C3121.98 (16)
C14—C13—H13120.1O1—C1A—C2120.89 (16)
C12—C13—H13120.1C3—C1A—C2117.11 (16)
C15—C14—C13119.91 (17)C1A—C2—H2A109.5
C15—C14—H14120C1A—C2—H2B109.5
C13—C14—H14120H2A—C2—H2B109.5
C14—C15—C16120.98 (16)C1A—C2—H2C109.5
C14—C15—H15119.5H2A—C2—H2C109.5
C16—C15—H15119.5H2B—C2—H2C109.5
C15—C16—C11119.07 (17)C1A—C3—H3A109.5
C15—C16—H16120.5C1A—C3—H3B109.5
C11—C16—H16120.5H3A—C3—H3B109.5
C26—C21—C22120.50 (15)C1A—C3—H3C109.5
C26—C21—N2118.82 (15)H3A—C3—H3C109.5
C22—C21—N2120.62 (14)H3B—C3—H3C109.5
Cg1 and Cg2 are the centroids of the C11–C16 and C21–C26 rings, respectively.
D—H···AD—HH···AD···AD—H···A
N1—H1···S1i0.87 (1)2.48 (1)3.3240 (13)165.(1)
N2—H2···O10.87 (1)2.09 (1)2.8993 (18)154.(2)
C2—H2A···Cg10.983.023.931 (2)155
C2—H2C···Cg2ii0.982.803.607 (2)140
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of the C11–C16 and C21–C26 rings, respectively.

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯S1i0.87 (1)2.48 (1)3.3240 (13)165 (1)
N2—H2⋯O10.87 (1)2.09 (1)2.8993 (18)154 (2)
C2—H2ACg10.983.023.931 (2)155
C2—H2CCg2ii0.982.803.607 (2)140

Symmetry codes: (i) ; (ii) .

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