Literature DB >> 21522735

2-Methyl-imidazolium picrate.

Grzegorz Dutkiewicz, S Samshuddin, B Narayana, H S Yathirajan, Maciej Kubicki.   

Abstract

In both ionic components of the title salt, C(4)H(7)N(2) (+)·C(6)H(2)N(3)O(7) (-), the rings are approximately planar; the maximum deviation from the mean plane is an order of magnitude larger in the picrate ring [0.0289 (10) Å] than in the imidazolium ring [0.0028 (10) Å. The nitro groups are twisted with respect to the six-atom ring plane; the NO(2) groups next to the oxide O atom, at the 2- and 6-positions, are twisted more [by 53.59 (9) and 18.46 (12)°] than the NO(2) group at the 4-postition, for which the twist angle is 7.28 (16)°. In the crystal, N-H⋯O hydrogen bonds, in which the hydroxyl O atom acts as a double acceptor and one of the O atoms from a nitro group acts as an additional acceptor, connect mol-ecules into chains along the c-axis direction. Relatively short C-H⋯O contacts and π-π inter-actions between symmetry-related six-membered rings [centroid-centroid distances = 3.5938 (10) and 3.6223 (10) Å] also occur.

Entities:  

Year:  2010        PMID: 21522735      PMCID: PMC3050384          DOI: 10.1107/S1600536810053390

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structure of imidazolium picrate, see: Soriano-García et al. (1990 ▶). For the structures of picrates of some other imidazole derivatives, see, for example: Nardelli et al. (1987 ▶); Du & Zhao (2003 ▶); MacDonald et al. (2005 ▶); Pi et al. (2009 ▶).

Experimental

Crystal data

C4H7N2 +·C6H2N3O7 − M = 311.22 Monoclinic, a = 7.0983 (9) Å b = 21.644 (2) Å c = 8.1583 (9) Å β = 100.327 (12)° V = 1233.1 (2) Å3 Z = 4 Mo Kα radiation μ = 0.15 mm−1 T = 295 K 0.3 × 0.2 × 0.2 mm

Data collection

Oxford Diffraction Xcalibur Eos diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009 ▶) T min = 0.964, T max = 1.000 4778 measured reflections 2483 independent reflections 1792 reflections with I > 2σ(I) R int = 0.014

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.101 S = 1.03 2483 reflections 235 parameters All H-atom parameters refined Δρmax = 0.30 e Å−3 Δρmin = −0.27 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: Stereochemical Workstation Operation Manual. (Siemens, 1989 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810053390/dn2638sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810053390/dn2638Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C4H7N2+·C6H2N3O7F(000) = 640
Mr = 311.22Dx = 1.676 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2592 reflections
a = 7.0983 (9) Åθ = 2.9–28.2°
b = 21.644 (2) ŵ = 0.15 mm1
c = 8.1583 (9) ÅT = 295 K
β = 100.327 (12)°Block, yellow
V = 1233.1 (2) Å30.3 × 0.2 × 0.2 mm
Z = 4
Oxford Diffraction Xcalibur Eos diffractometer2483 independent reflections
Radiation source: Enhance (Mo) X-ray Source1792 reflections with I > 2σ(I)
graphiteRint = 0.014
Detector resolution: 16.1544 pixels mm-1θmax = 28.2°, θmin = 2.9°
ω scansh = −8→9
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009)k = −15→28
Tmin = 0.964, Tmax = 1.000l = −10→10
4778 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.101All H-atom parameters refined
S = 1.03w = 1/[σ2(Fo2) + (0.060P)2] where P = (Fo2 + 2Fc2)/3
2483 reflections(Δ/σ)max = 0.001
235 parametersΔρmax = 0.30 e Å3
0 restraintsΔρmin = −0.27 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.3265 (2)0.93118 (8)0.60988 (19)0.0241 (4)
O10.38378 (17)0.88003 (5)0.67241 (14)0.0347 (3)
C20.2787 (2)0.98440 (7)0.70037 (19)0.0253 (4)
N20.2874 (2)0.98159 (7)0.88019 (17)0.0358 (4)
O210.2016 (3)1.02077 (8)0.94412 (17)0.0716 (5)
O220.3770 (3)0.94120 (7)0.96128 (17)0.0656 (5)
C30.2171 (2)1.03981 (8)0.6272 (2)0.0266 (4)
H30.189 (2)1.0723 (8)0.691 (2)0.028 (5)*
C40.1956 (2)1.04630 (8)0.4569 (2)0.0267 (4)
N40.1304 (2)1.10493 (7)0.38329 (19)0.0348 (4)
O410.1247 (2)1.11171 (7)0.23347 (17)0.0615 (5)
O420.08086 (19)1.14506 (6)0.47167 (17)0.0479 (4)
C50.2260 (2)0.99677 (8)0.3565 (2)0.0272 (4)
H50.205 (3)0.9999 (9)0.243 (2)0.041 (5)*
C60.2876 (2)0.94228 (7)0.43176 (19)0.0248 (4)
N60.3054 (2)0.89003 (7)0.32303 (17)0.0310 (3)
O610.45451 (19)0.86075 (6)0.34477 (16)0.0436 (4)
O620.1676 (2)0.87781 (7)0.21488 (17)0.0537 (4)
N110.5304 (2)0.76346 (7)0.59823 (18)0.0353 (4)
H110.491 (3)0.8016 (10)0.617 (3)0.054 (6)*
C120.4264 (2)0.72364 (8)0.49579 (19)0.0310 (4)
C12A0.2238 (3)0.73045 (13)0.4178 (3)0.0484 (5)
H12A0.163 (5)0.6936 (15)0.401 (4)0.129 (13)*
H12B0.155 (4)0.7574 (13)0.480 (3)0.094 (9)*
H12C0.213 (4)0.7461 (14)0.318 (4)0.111 (11)*
N130.5382 (2)0.67629 (7)0.47868 (18)0.0341 (4)
H130.506 (3)0.6450 (11)0.416 (3)0.056 (7)*
C140.7165 (3)0.68530 (9)0.5723 (2)0.0377 (4)
H140.811 (3)0.6565 (10)0.574 (2)0.046 (6)*
C150.7118 (3)0.74005 (9)0.6470 (2)0.0391 (5)
H150.808 (3)0.7634 (10)0.719 (3)0.057 (6)*
U11U22U33U12U13U23
C10.0225 (7)0.0236 (9)0.0259 (8)0.0002 (7)0.0035 (6)0.0003 (7)
O10.0505 (7)0.0247 (7)0.0282 (6)0.0088 (6)0.0053 (5)0.0019 (5)
C20.0274 (8)0.0263 (9)0.0219 (8)−0.0003 (7)0.0038 (6)0.0000 (7)
N20.0501 (9)0.0318 (9)0.0252 (7)0.0080 (7)0.0062 (7)−0.0004 (7)
O210.1138 (13)0.0717 (12)0.0334 (7)0.0473 (10)0.0244 (8)0.0002 (8)
O220.1215 (14)0.0427 (9)0.0296 (7)0.0315 (9)0.0057 (8)0.0062 (7)
C30.0266 (8)0.0239 (9)0.0299 (9)0.0008 (7)0.0070 (7)−0.0040 (8)
C40.0280 (8)0.0209 (9)0.0321 (9)0.0018 (7)0.0077 (7)0.0050 (7)
N40.0378 (8)0.0286 (9)0.0385 (8)0.0024 (7)0.0084 (7)0.0083 (7)
O410.1011 (12)0.0457 (9)0.0393 (8)0.0197 (8)0.0173 (8)0.0183 (7)
O420.0632 (9)0.0264 (7)0.0563 (9)0.0118 (6)0.0165 (7)0.0024 (7)
C50.0292 (8)0.0304 (10)0.0223 (8)−0.0002 (7)0.0052 (7)0.0037 (8)
C60.0261 (8)0.0239 (9)0.0250 (8)−0.0007 (7)0.0067 (6)−0.0028 (7)
N60.0395 (8)0.0282 (8)0.0265 (7)−0.0004 (7)0.0093 (6)−0.0008 (6)
O610.0498 (8)0.0378 (8)0.0451 (8)0.0136 (7)0.0134 (6)−0.0063 (6)
O620.0563 (8)0.0575 (10)0.0419 (8)−0.0018 (7)−0.0060 (7)−0.0211 (7)
N110.0479 (9)0.0240 (8)0.0329 (8)−0.0010 (8)0.0044 (7)−0.0042 (7)
C120.0424 (10)0.0252 (9)0.0256 (8)−0.0034 (8)0.0067 (7)−0.0002 (7)
C12A0.0426 (12)0.0519 (15)0.0477 (12)−0.0025 (11)0.0000 (10)0.0012 (12)
N130.0501 (9)0.0230 (8)0.0293 (8)−0.0043 (7)0.0077 (7)−0.0044 (7)
C140.0426 (11)0.0329 (11)0.0381 (10)0.0036 (9)0.0084 (9)0.0046 (9)
C150.0416 (10)0.0374 (12)0.0356 (10)−0.0071 (9)−0.0005 (8)0.0006 (9)
C1—O11.2557 (19)N6—O611.2193 (18)
C1—C21.441 (2)N6—O621.2226 (19)
C1—C61.450 (2)N11—C121.329 (2)
C2—C31.376 (2)N11—C151.375 (2)
C2—N21.459 (2)N11—H110.89 (2)
N2—O221.2067 (19)C12—N131.319 (2)
N2—O211.2145 (19)C12—C12A1.472 (3)
C3—C41.377 (2)C12A—H12A0.91 (3)
C3—H30.918 (18)C12A—H12B0.96 (3)
C4—C51.389 (2)C12A—H12C0.87 (3)
C4—N41.444 (2)N13—C141.370 (2)
N4—O421.2200 (19)N13—H130.86 (2)
N4—O411.2245 (19)C14—C151.336 (3)
C5—C61.365 (2)C14—H140.92 (2)
C5—H50.911 (19)C15—H150.96 (2)
C6—N61.457 (2)
O1—C1—C2125.83 (14)O61—N6—O62123.62 (15)
O1—C1—C6122.88 (14)O61—N6—C6118.85 (14)
C2—C1—C6111.17 (14)O62—N6—C6117.53 (14)
C3—C2—C1124.06 (14)C12—N11—C15109.23 (16)
C3—C2—N2115.19 (14)C12—N11—H11123.3 (13)
C1—C2—N2120.72 (14)C15—N11—H11126.7 (13)
O22—N2—O21121.74 (15)N13—C12—N11107.04 (16)
O22—N2—C2120.29 (14)N13—C12—C12A126.31 (18)
O21—N2—C2117.97 (15)N11—C12—C12A126.64 (18)
C2—C3—C4119.73 (16)C12—C12A—H12A112 (2)
C2—C3—H3120.5 (11)C12—C12A—H12B112.4 (16)
C4—C3—H3119.7 (11)H12A—C12A—H12B110 (2)
C3—C4—C5121.00 (15)C12—C12A—H12C111 (2)
C3—C4—N4118.57 (15)H12A—C12A—H12C104 (3)
C5—C4—N4120.34 (15)H12B—C12A—H12C107 (3)
O42—N4—O41122.90 (16)C12—N13—C14110.12 (16)
O42—N4—C4118.99 (15)C12—N13—H13125.4 (15)
O41—N4—C4118.10 (15)C14—N13—H13124.5 (15)
C6—C5—C4118.21 (15)C15—C14—N13106.55 (17)
C6—C5—H5120.2 (12)C15—C14—H14132.4 (13)
C4—C5—H5121.6 (12)N13—C14—H14121.0 (13)
C5—C6—C1125.60 (15)C14—C15—N11107.06 (17)
C5—C6—N6116.91 (14)C14—C15—H15132.4 (13)
C1—C6—N6117.40 (14)N11—C15—H15120.5 (13)
O1—C1—C2—C3179.72 (16)C4—C5—C6—C1−0.5 (2)
C6—C1—C2—C3−4.2 (2)C4—C5—C6—N6175.84 (13)
O1—C1—C2—N2−2.4 (2)O1—C1—C6—C5−179.73 (16)
C6—C1—C2—N2173.62 (14)C2—C1—C6—C54.1 (2)
C3—C2—N2—O22−163.80 (17)O1—C1—C6—N63.9 (2)
C1—C2—N2—O2218.2 (2)C2—C1—C6—N6−172.26 (13)
C3—C2—N2—O2116.4 (2)C5—C6—N6—O61129.43 (16)
C1—C2—N2—O21−161.61 (17)C1—C6—N6—O61−53.90 (19)
C1—C2—C3—C40.9 (2)C5—C6—N6—O62−51.0 (2)
N2—C2—C3—C4−177.07 (14)C1—C6—N6—O62125.64 (17)
C2—C3—C4—C53.3 (2)C15—N11—C12—N13−0.36 (19)
C2—C3—C4—N4179.90 (14)C15—N11—C12—C12A178.83 (19)
C3—C4—N4—O42−6.2 (2)N11—C12—N13—C140.53 (19)
C5—C4—N4—O42170.49 (15)C12A—C12—N13—C14−178.67 (18)
C3—C4—N4—O41174.92 (16)C12—N13—C14—C15−0.49 (19)
C5—C4—N4—O41−8.4 (2)N13—C14—C15—N110.25 (19)
C3—C4—C5—C6−3.4 (2)C12—N11—C15—C140.1 (2)
N4—C4—C5—C6−179.99 (15)
D—H···AD—HH···AD···AD—H···A
C5—H5···O21i0.911 (19)2.478 (19)3.378 (2)169.4 (16)
N11—H11···O10.89 (2)1.95 (2)2.8357 (19)172.9 (19)
N13—H13···O1ii0.86 (2)2.09 (2)2.819 (2)143 (2)
N13—H13···O22ii0.86 (2)2.14 (2)2.782 (2)131.3 (19)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C5—H5⋯O21i0.911 (19)2.478 (19)3.378 (2)169.4 (16)
N11—H11⋯O10.89 (2)1.95 (2)2.8357 (19)172.9 (19)
N13—H13⋯O1ii0.86 (2)2.09 (2)2.819 (2)143 (2)
N13—H13⋯O22ii0.86 (2)2.14 (2)2.782 (2)131.3 (19)

Symmetry codes: (i) ; (ii) .

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