Literature DB >> 21522711

4-[(1-Adamant-yl)carbamo-yl]pyridinium chloride.

Yingchun Wang1.   

Abstract

In the title compound, C(16)H(21)N(2)O(+)·Cl(-), the amide group makes a dihedral angle of 25.9 (1)° with respect to the pyridine ring. In the crystal, inter-molecular N-H⋯Cl bonds and weak C-H⋯Cl and C-H⋯O contacts link the cations and the anions into layers parallel to the ac plane. The layers are packed along [010] by hydro-phobic inter-actions between adamantane units.

Entities:  

Year:  2010        PMID: 21522711      PMCID: PMC3050416          DOI: 10.1107/S1600536810052499

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For biomedical properties of adamantane-1-amine derivatives, see: Lees (2005 ▶); Nayyar et al. (2007 ▶). For ferroelectric properties of pyridinium salts, see: Ye et al. (2010 ▶); Zhang et al. (2010 ▶).

Experimental

Crystal data

C16H21N2O+·Cl− M = 292.80 Monoclinic, a = 7.117 (4) Å b = 23.093 (13) Å c = 11.241 (5) Å β = 127.56 (2)° V = 1464.5 (13) Å3 Z = 4 Mo Kα radiation μ = 0.26 mm−1 T = 293 K 0.20 × 0.20 × 0.20 mm

Data collection

Rigaku SCXmini diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.950, T max = 0.950 14193 measured reflections 3377 independent reflections 2910 reflections with I > 2σ(I) R int = 0.042

Refinement

R[F 2 > 2σ(F 2)] = 0.056 wR(F 2) = 0.139 S = 1.11 3377 reflections 202 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.22 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL/PC (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL/PC. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810052499/si2302sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810052499/si2302Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H21N2O+·ClF(000) = 624
Mr = 292.80Dx = 1.328 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3642 reflections
a = 7.117 (4) Åθ = 2.9–27.6°
b = 23.093 (13) ŵ = 0.26 mm1
c = 11.241 (5) ÅT = 293 K
β = 127.56 (2)°Prism, colourless
V = 1464.5 (13) Å30.20 × 0.20 × 0.20 mm
Z = 4
Rigaku SCXmini diffractometer3377 independent reflections
Radiation source: fine-focus sealed tube2910 reflections with I > 2σ(I)
graphiteRint = 0.042
Detector resolution: 13.6612 pixels mm-1θmax = 27.6°, θmin = 2.9°
ω scansh = −9→9
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −30→30
Tmin = 0.950, Tmax = 0.950l = −14→14
14193 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.056Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.139H-atom parameters constrained
S = 1.11w = 1/[σ2(Fo2) + (0.0598P)2 + 0.5955P] where P = (Fo2 + 2Fc2)/3
3377 reflections(Δ/σ)max = 0.041
202 parametersΔρmax = 0.23 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.13642 (10)−0.01867 (2)0.85883 (6)0.03808 (17)
O10.3301 (3)−0.12489 (9)0.51605 (18)0.0531 (5)
N10.6627 (4)−0.03832 (8)0.2831 (2)0.0406 (5)
H1A0.6865−0.02280.21980.070 (9)*
N20.7203 (3)−0.11813 (8)0.71977 (19)0.0345 (4)
H2A0.8612−0.10360.75120.059 (8)*
C10.5926 (4)−0.08374 (9)0.4772 (2)0.0307 (4)
C20.4096 (4)−0.05633 (10)0.3459 (2)0.0375 (5)
H2B0.2555−0.05320.32210.050 (7)*
C30.4491 (4)−0.03368 (10)0.2503 (3)0.0412 (5)
H3A0.3237−0.01440.15990.053 (8)*
C40.8423 (4)−0.06503 (10)0.4063 (3)0.0426 (5)
H4A0.9931−0.06800.42540.053 (8)*
C50.8118 (4)−0.08820 (10)0.5065 (3)0.0384 (5)
H5A0.9410−0.10720.59590.050 (7)*
C60.5359 (4)−0.11061 (10)0.5753 (2)0.0349 (5)
C70.7100 (3)−0.14894 (8)0.8312 (2)0.0286 (4)
C80.6137 (4)−0.21041 (9)0.7764 (2)0.0381 (5)
H8A0.4549−0.20860.68470.043 (7)*
H8B0.7099−0.23070.75680.059 (8)*
C90.9648 (4)−0.15297 (10)0.9762 (2)0.0404 (5)
H9A1.0617−0.17310.95690.057 (8)*
H9B1.0284−0.11471.01110.044 (7)*
C100.5588 (4)−0.11689 (9)0.8641 (3)0.0376 (5)
H10A0.6192−0.07840.89890.050 (7)*
H10B0.3989−0.11390.77380.046 (7)*
C110.6166 (4)−0.24278 (9)0.8968 (3)0.0415 (5)
H11A0.5551−0.28110.86150.057 (8)*
C120.4621 (4)−0.21057 (10)0.9256 (3)0.0427 (5)
H12A0.3033−0.20800.83410.060 (8)*
H12B0.4575−0.23130.99780.060 (8)*
C130.5605 (4)−0.15005 (10)0.9832 (3)0.0403 (5)
H13A0.4650−0.13001.00370.064 (8)*
C140.8703 (5)−0.24643 (10)1.0405 (3)0.0463 (6)
H14A0.8734−0.26751.11530.056 (8)*
H14B0.9668−0.26681.02110.067 (9)*
C150.9674 (4)−0.18568 (11)1.0960 (2)0.0419 (5)
H15A1.1271−0.18791.18670.053 (7)*
C160.8150 (5)−0.15348 (11)1.1268 (3)0.0450 (6)
H16A0.8771−0.11521.16290.050 (7)*
H16B0.8180−0.17351.20280.059 (8)*
U11U22U33U12U13U23
Cl10.0399 (3)0.0436 (3)0.0357 (3)−0.0034 (2)0.0256 (3)0.0040 (2)
O10.0297 (9)0.0891 (13)0.0340 (9)−0.0059 (8)0.0160 (7)0.0178 (8)
N10.0554 (12)0.0444 (10)0.0346 (10)−0.0066 (9)0.0340 (10)0.0014 (8)
N20.0293 (9)0.0497 (10)0.0246 (8)−0.0055 (7)0.0166 (8)0.0054 (7)
C10.0320 (10)0.0365 (10)0.0262 (10)−0.0031 (8)0.0189 (9)0.0004 (8)
C20.0336 (11)0.0460 (12)0.0328 (11)0.0025 (9)0.0203 (10)0.0092 (9)
C30.0462 (13)0.0443 (12)0.0306 (11)−0.0007 (10)0.0220 (11)0.0076 (9)
C40.0419 (13)0.0553 (14)0.0440 (13)−0.0019 (10)0.0331 (12)−0.0004 (10)
C50.0339 (11)0.0497 (13)0.0333 (11)0.0041 (9)0.0213 (10)0.0064 (9)
C60.0307 (11)0.0459 (12)0.0296 (11)−0.0006 (8)0.0191 (9)0.0068 (8)
C70.0291 (10)0.0354 (10)0.0229 (9)−0.0015 (8)0.0166 (8)0.0036 (7)
C80.0458 (13)0.0383 (12)0.0332 (11)−0.0039 (9)0.0257 (11)−0.0036 (9)
C90.0295 (11)0.0546 (14)0.0319 (11)−0.0049 (9)0.0160 (10)0.0079 (10)
C100.0453 (13)0.0372 (11)0.0369 (12)0.0088 (9)0.0286 (11)0.0078 (9)
C110.0527 (14)0.0303 (11)0.0400 (12)−0.0070 (9)0.0274 (11)0.0006 (9)
C120.0372 (12)0.0569 (14)0.0361 (12)−0.0047 (10)0.0233 (11)0.0091 (10)
C130.0492 (14)0.0478 (13)0.0382 (12)0.0093 (10)0.0340 (12)0.0066 (9)
C140.0523 (15)0.0427 (13)0.0482 (14)0.0117 (10)0.0328 (13)0.0168 (10)
C150.0294 (11)0.0583 (14)0.0267 (11)−0.0015 (9)0.0112 (9)0.0122 (9)
C160.0571 (15)0.0491 (14)0.0297 (12)−0.0087 (11)0.0270 (12)−0.0011 (9)
O1—C61.228 (3)C9—C151.535 (3)
N1—C31.332 (3)C9—H9A0.9600
N1—C41.332 (3)C9—H9B0.9601
N1—H1A0.9000C10—C131.536 (3)
N2—C61.339 (3)C10—H10A0.9602
N2—C71.480 (2)C10—H10B0.9599
N2—H2A0.9000C11—C121.517 (3)
C1—C51.388 (3)C11—C141.523 (4)
C1—C21.390 (3)C11—H11A0.9599
C1—C61.519 (3)C12—C131.520 (3)
C2—C31.369 (3)C12—H12A0.9599
C2—H2B0.9601C12—H12B0.9600
C3—H3A0.9599C13—C161.526 (3)
C4—C51.379 (3)C13—H13A0.9601
C4—H4A0.9601C14—C151.520 (4)
C5—H5A0.9599C14—H14A0.9601
C7—C101.526 (3)C14—H14B0.9600
C7—C81.533 (3)C15—C161.518 (3)
C7—C91.533 (3)C15—H15A0.9600
C8—C111.535 (3)C16—H16A0.9599
C8—H8A0.9600C16—H16B0.9599
C8—H8B0.9600
C3—N1—C4122.33 (19)C7—C10—C13109.73 (17)
C3—N1—H1A118.9C7—C10—H10A109.9
C4—N1—H1A118.8C13—C10—H10A110.0
C6—N2—C7124.82 (18)C7—C10—H10B109.6
C6—N2—H2A117.5C13—C10—H10B109.4
C7—N2—H2A117.7H10A—C10—H10B108.2
C5—C1—C2118.42 (19)C12—C11—C14110.2 (2)
C5—C1—C6123.72 (18)C12—C11—C8109.11 (19)
C2—C1—C6117.73 (19)C14—C11—C8109.4 (2)
C3—C2—C1120.0 (2)C12—C11—H11A109.5
C3—C2—H2B119.9C14—C11—H11A109.5
C1—C2—H2B120.1C8—C11—H11A109.1
N1—C3—C2119.8 (2)C11—C12—C13109.63 (18)
N1—C3—H3A119.8C11—C12—H12A109.6
C2—C3—H3A120.3C13—C12—H12A109.5
N1—C4—C5120.0 (2)C11—C12—H12B109.8
N1—C4—H4A119.9C13—C12—H12B110.1
C5—C4—H4A120.1H12A—C12—H12B108.2
C4—C5—C1119.4 (2)C12—C13—C16110.15 (19)
C4—C5—H5A120.3C12—C13—C10109.30 (19)
C1—C5—H5A120.2C16—C13—C10108.74 (19)
O1—C6—N2125.90 (19)C12—C13—H13A109.7
O1—C6—C1118.23 (19)C16—C13—H13A109.2
N2—C6—C1115.83 (18)C10—C13—H13A109.8
N2—C7—C10112.20 (17)C15—C14—C11109.43 (18)
N2—C7—C8110.26 (16)C15—C14—H14A110.2
C10—C7—C8109.73 (17)C11—C14—H14A109.7
N2—C7—C9107.00 (16)C15—C14—H14B109.6
C10—C7—C9108.87 (18)C11—C14—H14B109.7
C8—C7—C9108.68 (17)H14A—C14—H14B108.2
C11—C8—C7109.54 (17)C16—C15—C14109.7 (2)
C11—C8—H8A110.0C16—C15—C9109.31 (19)
C7—C8—H8A109.7C14—C15—C9109.5 (2)
C11—C8—H8B109.7C16—C15—H15A109.4
C7—C8—H8B109.7C14—C15—H15A109.5
H8A—C8—H8B108.2C9—C15—H15A109.4
C15—C9—C7109.69 (17)C15—C16—C13109.68 (19)
C15—C9—H9A109.6C15—C16—H16A109.8
C7—C9—H9A109.6C13—C16—H16A110.1
C15—C9—H9B110.1C15—C16—H16B109.6
C7—C9—H9B109.6C13—C16—H16B109.5
H9A—C9—H9B108.2H16A—C16—H16B108.1
C5—C1—C2—C3−1.1 (3)C8—C7—C9—C15−59.8 (2)
C6—C1—C2—C3−177.1 (2)N2—C7—C10—C13−178.48 (17)
C4—N1—C3—C20.7 (3)C8—C7—C10—C1358.6 (2)
C1—C2—C3—N10.4 (3)C9—C7—C10—C13−60.2 (2)
C3—N1—C4—C5−1.1 (4)C7—C8—C11—C1260.1 (2)
N1—C4—C5—C10.4 (4)C7—C8—C11—C14−60.6 (2)
C2—C1—C5—C40.6 (3)C14—C11—C12—C1358.8 (2)
C6—C1—C5—C4176.4 (2)C8—C11—C12—C13−61.3 (2)
C7—N2—C6—O14.6 (4)C11—C12—C13—C16−58.4 (2)
C7—N2—C6—C1−173.26 (18)C11—C12—C13—C1061.0 (2)
C5—C1—C6—O1−151.3 (2)C7—C10—C13—C12−59.5 (2)
C2—C1—C6—O124.5 (3)C7—C10—C13—C1660.8 (2)
C5—C1—C6—N226.7 (3)C12—C11—C14—C15−59.6 (2)
C2—C1—C6—N2−157.5 (2)C8—C11—C14—C1560.4 (3)
C6—N2—C7—C10−66.8 (3)C11—C14—C15—C1659.8 (2)
C6—N2—C7—C855.8 (3)C11—C14—C15—C9−60.2 (3)
C6—N2—C7—C9173.9 (2)C7—C9—C15—C16−59.9 (2)
N2—C7—C8—C11177.02 (18)C7—C9—C15—C1460.2 (3)
C10—C7—C8—C11−58.9 (2)C14—C15—C16—C13−59.6 (2)
C9—C7—C8—C1160.0 (2)C9—C15—C16—C1360.6 (2)
N2—C7—C9—C15−178.89 (18)C12—C13—C16—C1559.0 (2)
C10—C7—C9—C1559.6 (2)C10—C13—C16—C15−60.8 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1A···Cl1i0.902.163.017 (2)160.
N2—H2A···Cl1ii0.902.503.293 (2)147.
C2—H2B···Cl1iii0.962.793.535 (3)136.
C3—H3A···Cl1iv0.962.783.536 (3)136.
C4—H4A···O1ii0.962.353.203 (3)147.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯Cl1i0.902.163.017 (2)160
N2—H2A⋯Cl1ii0.902.503.293 (2)147
C2—H2B⋯Cl1iii0.962.793.535 (3)136
C3—H3A⋯Cl1iv0.962.783.536 (3)136
C4—H4A⋯O1ii0.962.353.203 (3)147

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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