Literature DB >> 21522705

Bis(2-{2-[2-(benzyl-carbamo-yl)phen-oxy]acetamido}-eth-yl)ammonium nitrate ethanol disolvate.

Jiaji Liu1, Xiaoliang Tang, Zhengdan Lu, Guolin Zhang, Weisheng Liu.   

Abstract

In the title compound, C(36)H(40)N(5)O(6) (+)·NO(3) (-)·2C(2)H(5)OH, the nitrate anion is disordered over the two orientations of equal occupancy while the solvent mol-ecule reveals large displacement parameters. The cation is formed by protonation of the N atom of a secondary amine in the middle of the flexible chain and the whole compound has crystallographically imposed C-2 symmetry with the crystallographic b axis. An O atom of the nitrate anion links the acidic H atoms of the cation via N-H⋯O hydrogen bonding. In addition, neighbouring cations are connected by inter-molecular N-H⋯O hydrogen bonds and π-π inter-actions between the benzamide groups of the cations [centroid-centroid distance = 4.000 (3) Å], forming a chain along [001]. The ethanol solvent mol-ecules are arranged on the side of the chain through O-H⋯O hydrogen bonds.

Entities:  

Year:  2010        PMID: 21522705      PMCID: PMC3050242          DOI: 10.1107/S1600536810052670

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

Luminescent lanthanide complexes have attracted intense research inter­est due to their very narrow emission bands and large Stokes shifts, see: Wang et al. (2009 ▶); Bunzli & Piguet (2005 ▶); Stein & Wurzberg (1975 ▶). For amide-type open-chain ligands, see: Liu et al. (2009 ▶); Yi et al. (2007 ▶); Hamann et al. (2004 ▶).

Experimental

Crystal data

C36H40N5O6NO3 −·2C2H6O M = 792.88 Monoclinic, a = 16.978 (3) Å b = 11.405 (2) Å c = 11.164 (2) Å β = 108.04 (3)° V = 2055.6 (7) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 296 K 0.22 × 0.18 × 0.17 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1997 ▶) T min = 0.980, T max = 0.984 4901 measured reflections 1995 independent reflections 1334 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.063 wR(F 2) = 0.190 S = 1.03 1995 reflections 277 parameters 45 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.26 e Å−3 Δρmin = −0.32 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810052670/kp2291sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810052670/kp2291Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C36H40N5O6+·NO3·2C2H6OF(000) = 844
Mr = 792.88Dx = 1.281 Mg m3
Monoclinic, C2Mo Kα radiation, λ = 0.71073 Å
Hall symbol: C2yCell parameters from 1019 reflections
a = 16.978 (3) Åθ = 2.5–20.9°
b = 11.405 (2) ŵ = 0.09 mm1
c = 11.164 (2) ÅT = 296 K
β = 108.04 (3)°Block, colourless
V = 2055.6 (7) Å30.22 × 0.18 × 0.17 mm
Z = 2
Bruker SMART CCD area-detector diffractometer1995 independent reflections
Radiation source: fine-focus sealed tube1334 reflections with I > 2σ(I)
graphiteRint = 0.035
φ and ω scansθmax = 25.5°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 1997)h = −20→20
Tmin = 0.980, Tmax = 0.984k = −13→13
4901 measured reflectionsl = −8→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.063Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.190H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.1204P)2] where P = (Fo2 + 2Fc2)/3
1995 reflections(Δ/σ)max < 0.001
277 parametersΔρmax = 0.26 e Å3
45 restraintsΔρmin = −0.32 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. The structure is non-centrosymmetric with only atoms lighter than silicon, MoKa measured Friedel data can not be used to determine absolute structure.
xyzUiso*/UeqOcc. (<1)
C10.1027 (3)0.7751 (5)0.3251 (4)0.0729 (14)
H10.05130.80710.28230.088*
C20.1500 (4)0.8244 (5)0.4399 (4)0.0853 (17)
H20.12990.88780.47420.102*
C30.2259 (4)0.7777 (5)0.5003 (5)0.0903 (18)
H30.25850.81020.57580.108*
C40.2544 (4)0.6830 (6)0.4502 (5)0.0860 (17)
H40.30600.65120.49230.103*
C50.2075 (3)0.6351 (5)0.3391 (4)0.0723 (14)
H50.22750.57080.30620.087*
C60.1309 (3)0.6806 (4)0.2748 (4)0.0573 (11)
C70.0779 (3)0.6306 (4)0.1506 (4)0.0614 (12)
H7A0.02010.63960.14530.074*
H7B0.08720.67620.08280.074*
C80.0726 (2)0.4235 (4)0.1984 (3)0.0492 (11)
C90.0862 (2)0.2966 (4)0.1713 (3)0.0477 (10)
C100.0729 (3)0.2155 (4)0.2537 (4)0.0645 (13)
H100.05610.24110.32100.077*
C110.0839 (4)0.0971 (5)0.2393 (5)0.0802 (16)
H110.07410.04410.29630.096*
C120.1088 (4)0.0581 (5)0.1432 (5)0.0833 (16)
H120.1161−0.02180.13380.100*
C130.1236 (3)0.1374 (4)0.0576 (4)0.0739 (14)
H130.14170.1108−0.00810.089*
C140.1113 (2)0.2551 (4)0.0710 (3)0.0506 (11)
C150.1448 (3)0.3013 (4)−0.1168 (3)0.0582 (12)
H15A0.10310.2491−0.16910.070*
H15B0.19730.2602−0.09000.070*
C160.1516 (3)0.4089 (4)−0.1880 (4)0.0583 (12)
C170.1515 (3)0.4860 (5)−0.3908 (4)0.0755 (15)
H17A0.16350.4531−0.46340.091*
H17B0.19780.5355−0.34640.091*
C180.0744 (3)0.5599 (4)−0.4352 (4)0.0633 (12)
H18A0.06550.5993−0.36350.076*
H18B0.08200.6195−0.49270.076*
C190.1576 (7)0.8011 (10)0.8043 (10)0.190 (4)
H19A0.11670.77350.72800.227*
H19B0.21200.78570.79650.227*
C200.1476 (8)0.9286 (12)0.8154 (13)0.220 (5)
H20A0.09670.94410.83320.330*
H20B0.14620.96600.73770.330*
H20C0.19320.95890.88250.330*
N10.0936 (2)0.5070 (3)0.1313 (3)0.0555 (9)
H1A0.11690.48810.07560.067*
N20.1437 (2)0.3914 (4)−0.3083 (3)0.0627 (10)
H2A0.13360.3217−0.33850.075*
N30.00000.4879 (5)−0.50000.0538 (13)
HN3−0.004 (2)0.437 (4)−0.435 (4)0.061 (12)*
N40.00000.1418 (5)0.50000.0692 (16)
O10.04311 (19)0.4475 (3)0.2828 (3)0.0665 (9)
O20.1223 (2)0.3375 (3)−0.0115 (2)0.0659 (8)
O30.1642 (2)0.5043 (4)−0.1375 (3)0.0879 (12)
O40.1490 (5)0.7383 (9)0.9064 (8)0.206 (3)
H4A0.15490.66620.89240.247*
O5−0.0303 (5)0.2373 (6)0.4705 (7)0.086 (3)0.50
O60.0685 (4)0.1426 (7)0.5858 (8)0.100 (3)0.50
O7−0.0314 (6)0.0489 (6)0.4703 (11)0.133 (4)0.50
U11U22U33U12U13U23
C10.106 (3)0.055 (3)0.059 (2)0.008 (3)0.028 (2)0.008 (2)
C20.161 (5)0.036 (2)0.068 (3)−0.008 (3)0.049 (3)−0.002 (2)
C30.118 (4)0.083 (4)0.061 (3)−0.036 (3)0.016 (3)0.004 (3)
C40.084 (3)0.094 (4)0.073 (3)−0.021 (3)0.013 (3)0.002 (3)
C50.083 (3)0.073 (3)0.062 (3)−0.006 (3)0.025 (2)−0.003 (2)
C60.084 (3)0.049 (2)0.0445 (18)0.001 (2)0.0277 (19)0.0087 (18)
C70.086 (3)0.052 (3)0.046 (2)0.005 (2)0.021 (2)0.0030 (19)
C80.056 (2)0.056 (3)0.0357 (17)0.001 (2)0.0152 (16)−0.0003 (18)
C90.057 (2)0.053 (2)0.0344 (16)−0.0033 (19)0.0158 (15)0.0026 (17)
C100.085 (3)0.066 (3)0.049 (2)0.008 (2)0.030 (2)0.013 (2)
C110.122 (4)0.068 (3)0.056 (2)−0.004 (3)0.035 (3)0.013 (2)
C120.128 (4)0.052 (3)0.079 (3)0.000 (3)0.046 (3)0.011 (2)
C130.108 (3)0.063 (3)0.065 (2)0.002 (3)0.048 (2)0.003 (2)
C140.065 (2)0.050 (2)0.0426 (19)−0.005 (2)0.0251 (17)0.0017 (18)
C150.082 (2)0.063 (3)0.0391 (17)0.005 (2)0.0330 (17)−0.0049 (19)
C160.069 (2)0.066 (3)0.0455 (19)−0.002 (2)0.0255 (18)0.004 (2)
C170.076 (2)0.107 (4)0.053 (2)0.004 (3)0.034 (2)0.019 (3)
C180.090 (3)0.055 (3)0.053 (2)−0.015 (2)0.033 (2)0.003 (2)
C190.183 (6)0.205 (8)0.190 (7)−0.004 (7)0.071 (6)0.009 (7)
C200.218 (7)0.219 (8)0.221 (8)−0.005 (7)0.066 (6)−0.043 (7)
N10.075 (2)0.054 (2)0.0423 (16)0.0008 (18)0.0244 (15)0.0025 (16)
N20.088 (2)0.067 (2)0.0447 (16)0.011 (2)0.0376 (15)0.0073 (17)
N30.078 (3)0.051 (3)0.038 (2)0.0000.027 (2)0.000
N40.072 (3)0.078 (4)0.069 (3)0.0000.038 (3)0.000
O10.0891 (18)0.070 (2)0.0545 (14)−0.0011 (17)0.0420 (14)−0.0032 (15)
O20.113 (2)0.0502 (18)0.0509 (13)0.0028 (16)0.0492 (14)0.0024 (13)
O30.125 (3)0.080 (2)0.0584 (17)−0.033 (2)0.0280 (18)−0.0035 (18)
O40.236 (6)0.214 (7)0.200 (5)−0.015 (5)0.117 (5)0.006 (5)
O50.127 (7)0.065 (4)0.079 (5)0.017 (4)0.049 (5)0.018 (4)
O60.113 (5)0.063 (5)0.138 (7)0.013 (5)0.061 (5)−0.002 (5)
O70.185 (11)0.070 (5)0.165 (8)−0.055 (5)0.084 (7)−0.062 (6)
C1—C61.367 (7)C16—O31.214 (6)
C1—C21.402 (7)C16—N21.322 (5)
C1—H10.9300C17—N21.452 (6)
C2—C31.365 (8)C17—C181.506 (7)
C2—H20.9300C17—H17A0.9700
C3—C41.371 (8)C17—H17B0.9700
C3—H30.9300C18—N31.493 (5)
C4—C51.364 (7)C18—H18A0.9700
C4—H40.9300C18—H18B0.9700
C5—C61.378 (6)C19—O41.392 (11)
C5—H50.9300C19—C201.475 (14)
C6—C71.512 (6)C19—H19A0.9700
C7—N11.464 (6)C19—H19B0.9700
C7—H7A0.9700C20—H20A0.9600
C7—H7B0.9700C20—H20B0.9600
C8—O11.226 (5)C20—H20C0.9600
C8—N11.327 (5)N1—H1A0.8600
C8—C91.511 (6)N2—H2A0.8600
C9—C101.372 (6)N3—C18i1.493 (5)
C9—C141.398 (5)N3—HN30.95 (4)
C10—C111.380 (8)N4—O7ii1.186 (8)
C10—H100.9300N4—O71.186 (8)
C11—C121.344 (8)N4—O5ii1.205 (8)
C11—H110.9300N4—O51.205 (8)
C12—C131.395 (7)N4—O61.258 (7)
C12—H120.9300N4—O6ii1.258 (7)
C13—C141.374 (7)O4—H4A0.8491
C13—H130.9300O5—O5ii1.035 (14)
C14—O21.368 (5)O5—O6ii1.316 (10)
C15—O21.406 (5)O6—O7ii1.298 (12)
C15—C161.486 (6)O6—O5ii1.316 (10)
C15—H15A0.9700O7—O7ii1.066 (18)
C15—H15B0.9700O7—O6ii1.298 (12)
C6—C1—C2121.2 (5)O2—C15—H15B110.3
C6—C1—H1119.4C16—C15—H15B110.3
C2—C1—H1119.4H15A—C15—H15B108.6
C3—C2—C1118.7 (5)O3—C16—N2123.7 (4)
C3—C2—H2120.7O3—C16—C15121.6 (4)
C1—C2—H2120.7N2—C16—C15114.8 (4)
C2—C3—C4120.3 (5)N2—C17—C18112.6 (4)
C2—C3—H3119.8N2—C17—H17A109.1
C4—C3—H3119.8C18—C17—H17A109.1
C5—C4—C3120.4 (5)N2—C17—H17B109.1
C5—C4—H4119.8C18—C17—H17B109.1
C3—C4—H4119.8H17A—C17—H17B107.8
C4—C5—C6120.9 (5)N3—C18—C17111.7 (4)
C4—C5—H5119.5N3—C18—H18A109.3
C6—C5—H5119.5C17—C18—H18A109.3
C1—C6—C5118.5 (4)N3—C18—H18B109.3
C1—C6—C7119.3 (4)C17—C18—H18B109.3
C5—C6—C7122.2 (4)H18A—C18—H18B107.9
N1—C7—C6114.5 (4)O4—C19—C20113.2 (12)
N1—C7—H7A108.6O4—C19—H19A108.9
C6—C7—H7A108.6C20—C19—H19A108.9
N1—C7—H7B108.6O4—C19—H19B108.9
C6—C7—H7B108.6C20—C19—H19B108.9
H7A—C7—H7B107.6H19A—C19—H19B107.7
O1—C8—N1121.3 (4)C19—C20—H20A109.5
O1—C8—C9119.5 (4)C19—C20—H20B109.5
N1—C8—C9119.2 (3)H20A—C20—H20B109.5
C10—C9—C14117.6 (4)C19—C20—H20C109.5
C10—C9—C8116.4 (4)H20A—C20—H20C109.5
C14—C9—C8126.0 (4)H20B—C20—H20C109.5
C9—C10—C11121.7 (5)C8—N1—C7121.0 (4)
C9—C10—H10119.1C8—N1—H1A119.5
C11—C10—H10119.1C7—N1—H1A119.5
C12—C11—C10120.3 (5)C16—N2—C17122.1 (4)
C12—C11—H11119.9C16—N2—H2A118.9
C10—C11—H11119.9C17—N2—H2A118.9
C11—C12—C13120.0 (5)C18—N3—C18i113.2 (5)
C11—C12—H12120.0C18—N3—HN3102 (2)
C13—C12—H12120.0C18i—N3—HN3117 (2)
C14—C13—C12119.6 (5)O7ii—N4—O5ii127.9 (6)
C14—C13—H13120.2O7—N4—O5127.9 (6)
C12—C13—H13120.2O7—N4—O6116.6 (8)
O2—C14—C13122.8 (4)O5—N4—O6114.7 (7)
O2—C14—C9116.4 (4)O7ii—N4—O6ii116.6 (8)
C13—C14—C9120.8 (4)O5ii—N4—O6ii114.7 (7)
O2—C15—C16106.9 (4)C14—O2—C15119.3 (3)
O2—C15—H15A110.3C19—O4—H4A107.3
C16—C15—H15A110.3
C6—C1—C2—C31.2 (8)C12—C13—C14—O2−178.0 (4)
C1—C2—C3—C4−1.2 (8)C12—C13—C14—C91.7 (7)
C2—C3—C4—C50.5 (9)C10—C9—C14—O2178.5 (4)
C3—C4—C5—C60.1 (8)C8—C9—C14—O2−1.8 (5)
C2—C1—C6—C5−0.5 (7)C10—C9—C14—C13−1.2 (6)
C2—C1—C6—C7−179.8 (5)C8—C9—C14—C13178.5 (4)
C4—C5—C6—C1−0.1 (7)O2—C15—C16—O323.1 (6)
C4—C5—C6—C7179.2 (5)O2—C15—C16—N2−157.5 (4)
C1—C6—C7—N1−155.0 (4)N2—C17—C18—N3−56.5 (5)
C5—C6—C7—N125.7 (7)O1—C8—N1—C7−3.7 (5)
O1—C8—C9—C10−7.0 (5)C9—C8—N1—C7177.2 (3)
N1—C8—C9—C10172.1 (4)C6—C7—N1—C869.5 (5)
O1—C8—C9—C14173.3 (3)O3—C16—N2—C171.6 (7)
N1—C8—C9—C14−7.6 (5)C15—C16—N2—C17−177.8 (4)
C14—C9—C10—C110.2 (6)C18—C17—N2—C16−78.9 (5)
C8—C9—C10—C11−179.6 (4)C17—C18—N3—C18i−169.9 (4)
C9—C10—C11—C120.4 (8)C13—C14—O2—C151.8 (6)
C10—C11—C12—C130.0 (9)C9—C14—O2—C15−177.9 (3)
C11—C12—C13—C14−1.1 (8)C16—C15—O2—C14179.8 (3)
D—H···AD—HH···AD···AD—H···A
N3—HN3···O5iii0.95 (4)2.49 (5)2.905 (9)106 (3)
N3—HN3···O5iv0.95 (4)2.41 (5)2.905 (9)112 (3)
N3—HN3···O1iv0.95 (4)2.01 (4)2.780 (3)137 (4)
O4—H4A···O3v0.851.892.740 (11)178
N1—H1A···O20.861.992.645 (5)132
N2—H2A···O5iv0.862.142.813 (9)135
N2—H2A···O6iii0.862.353.185 (9)163
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—HN3⋯O5i0.95 (4)2.49 (5)2.905 (9)106 (3)
N3—HN3⋯O5ii0.95 (4)2.41 (5)2.905 (9)112 (3)
N3—HN3⋯O1ii0.95 (4)2.01 (4)2.780 (3)137 (4)
O4—H4A⋯O3iii0.851.892.740 (11)178
N1—H1A⋯O20.861.992.645 (5)132
N2—H2A⋯O5ii0.862.142.813 (9)135
N2—H2A⋯O6i0.862.353.185 (9)163

Symmetry codes: (i) ; (ii) ; (iii) .

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