Literature DB >> 21522666

5-(4-Hy-droxy-3-meth-oxy-benz-yl)-1,3-thia-zolidine-2,4-dione monohydrate.

Li-Yan Xiong, Ting-Fang Wang, Li-Ping Zheng, Chuan Zhang, Feng-Chun Wang.   

Abstract

In the title compound, C(11)H(11)NO(4)S·H(2)O, the five-membered thia-zolidine ring is nearly planar, with a maximum deviation of 0.010 (2) Å. The dihedral angle between the thia-zolidine and benzene rings is 49.16 (9)°. Inter-molecular O-H⋯O and N-H⋯O hydrogen bonding is present in the crystal structure.

Entities:  

Year:  2010        PMID: 21522666      PMCID: PMC3050404          DOI: 10.1107/S1600536810049895

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the therapeutic and pharmacological properties of thia­zolidinediones, see: Day (1999 ▶); Spiegelman (1998 ▶). For the synthesis of the title compound, see: Madhavan et al. (2002 ▶); Shoda et al. (1983 ▶). For related structures, see: Divjaković et al. (1991 ▶); Yathirajan et al. (2005 ▶).

Experimental

Crystal data

C11H11NO4S·H2O M = 271.28 Monoclinic, a = 10.684 (4) Å b = 8.151 (3) Å c = 14.747 (5) Å β = 99.657 (4)° V = 1266.0 (8) Å3 Z = 4 Mo Kα radiation μ = 0.27 mm−1 T = 293 K 0.15 × 0.12 × 0.10 mm

Data collection

Bruker SMART 1000 CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.960, T max = 0.974 4985 measured reflections 2226 independent reflections 1902 reflections with I > 2σ(I) R int = 0.047

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.119 S = 1.05 2226 reflections 171 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.22 e Å−3 Δρmin = −0.31 e Å−3 Data collection: SMART (Bruker, 2003 ▶); cell refinement: SAINT (Bruker, 2003 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810049895/xu5102sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810049895/xu5102Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H11NO4S·H2OF(000) = 568
Mr = 271.28Dx = 1.423 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 889 reflections
a = 10.684 (4) Åθ = 2.8–27.5°
b = 8.151 (3) ŵ = 0.27 mm1
c = 14.747 (5) ÅT = 293 K
β = 99.657 (4)°Block, yellow
V = 1266.0 (8) Å30.15 × 0.12 × 0.10 mm
Z = 4
Bruker SMART 1000 CCD area-detector diffractometer2226 independent reflections
Radiation source: fine-focus sealed tube1902 reflections with I > 2σ(I)
graphiteRint = 0.047
Detector resolution: 10.0 pixels mm-1θmax = 25.0°, θmin = 2.2°
φ and ω scansh = −12→12
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)k = −9→6
Tmin = 0.960, Tmax = 0.974l = −16→17
4985 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.119H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0681P)2 + 0.2943P] where P = (Fo2 + 2Fc2)/3
2226 reflections(Δ/σ)max = 0.001
171 parametersΔρmax = 0.22 e Å3
0 restraintsΔρmin = −0.31 e Å3
Experimental. 1H NMR (300 MHz, CDCl3): δ 8.72(bar, 1H, N—H), 6.87–6.71 (m, 3H, 8-H, 11-H, 12-H), 5.46 (bar, 1H, 10-OH), 4.47–4.51 (m, 1H, 5-H), 3.83 (s, 3H, 9-OCH3), 3.46 (dd, 1H, j=14.4, 4.2, 3-H), 3.06 (dd, 1H, j=14.1, 9.6, 3-H). 13C NMR (300 MHz, CDCl3): δ 174.5, 167.5, 147.8, 145.7, 132.7, 123.1, 116.7, 114.9, 57.2, 56.1, 36.2. MS(ESI) m/z calc. for C11H11NO4S 253.27, found [M–1]+ 252.15. m.p. 109-110°C
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.49420 (5)1.06186 (7)0.70922 (3)0.0523 (2)
N30.51317 (16)1.07172 (19)0.88568 (11)0.0430 (4)
H30.53031.10720.94130.052*
C20.5427 (2)1.1623 (3)0.81421 (15)0.0529 (5)
C40.45618 (17)0.9243 (2)0.86643 (12)0.0383 (4)
C50.43481 (18)0.8857 (2)0.76418 (12)0.0403 (4)
H50.48680.79020.75450.048*
C60.29661 (18)0.8453 (3)0.72695 (13)0.0448 (5)
H6A0.27060.75260.76060.054*
H6B0.24400.93830.73700.054*
C70.27553 (18)0.8048 (2)0.62553 (13)0.0407 (4)
C80.31489 (17)0.6537 (2)0.59516 (12)0.0386 (4)
H80.35230.57680.63780.046*
C90.29866 (16)0.6178 (2)0.50237 (12)0.0360 (4)
C100.24649 (18)0.7353 (2)0.43822 (12)0.0408 (4)
C110.2075 (2)0.8830 (2)0.46857 (14)0.0512 (5)
H110.17180.96130.42610.061*
C120.2206 (2)0.9167 (2)0.56175 (14)0.0504 (5)
H120.19181.01630.58120.061*
C130.3765 (2)0.3430 (3)0.52648 (16)0.0541 (5)
H13A0.39550.24940.49170.081*
H13B0.31280.31410.56250.081*
H13C0.45200.37810.56650.081*
O10.5944 (2)1.2929 (2)0.82373 (12)0.0877 (7)
O20.42480 (14)0.83322 (17)0.92352 (9)0.0483 (4)
O30.33054 (14)0.47280 (16)0.46520 (9)0.0485 (4)
O40.23570 (15)0.69314 (17)0.34819 (9)0.0537 (4)
H4A0.20340.76910.31600.080*
O50.36833 (18)0.4211 (2)0.27286 (12)0.0558 (4)
H5A0.336 (4)0.444 (5)0.318 (3)0.134 (16)*
H5B0.376 (3)0.518 (4)0.253 (2)0.085 (10)*
U11U22U33U12U13U23
S10.0699 (4)0.0527 (4)0.0342 (3)−0.0171 (2)0.0079 (2)0.0023 (2)
N30.0578 (10)0.0384 (9)0.0326 (8)−0.0079 (7)0.0065 (7)−0.0046 (6)
C20.0715 (14)0.0423 (11)0.0453 (11)−0.0124 (10)0.0112 (10)−0.0012 (9)
C40.0432 (9)0.0353 (10)0.0352 (9)−0.0008 (7)0.0033 (7)−0.0011 (7)
C50.0510 (10)0.0365 (10)0.0332 (9)−0.0018 (8)0.0060 (8)−0.0021 (8)
C60.0518 (11)0.0454 (11)0.0374 (10)−0.0063 (9)0.0079 (8)−0.0067 (8)
C70.0465 (10)0.0381 (10)0.0369 (10)−0.0074 (8)0.0050 (8)−0.0055 (8)
C80.0441 (9)0.0368 (10)0.0337 (9)−0.0031 (8)0.0029 (7)0.0046 (7)
C90.0409 (9)0.0300 (9)0.0367 (9)−0.0029 (7)0.0051 (7)−0.0018 (7)
C100.0509 (10)0.0363 (10)0.0328 (9)−0.0020 (8)0.0006 (8)−0.0018 (7)
C110.0727 (14)0.0357 (10)0.0405 (10)0.0059 (10)−0.0042 (9)0.0021 (8)
C120.0679 (13)0.0344 (10)0.0466 (11)0.0016 (9)0.0028 (10)−0.0078 (8)
C130.0650 (13)0.0390 (11)0.0599 (13)0.0097 (10)0.0149 (10)0.0102 (10)
O10.1467 (19)0.0578 (11)0.0617 (11)−0.0545 (12)0.0262 (11)−0.0083 (8)
O20.0667 (9)0.0429 (7)0.0340 (7)−0.0108 (7)0.0047 (6)0.0033 (6)
O30.0718 (9)0.0344 (7)0.0391 (7)0.0089 (7)0.0084 (6)0.0019 (6)
O40.0836 (10)0.0421 (8)0.0312 (7)0.0092 (7)−0.0022 (7)−0.0009 (6)
O50.0797 (11)0.0438 (9)0.0440 (8)0.0040 (8)0.0106 (8)−0.0066 (7)
S1—C21.751 (2)C8—H80.9300
S1—C51.815 (2)C9—O31.370 (2)
N3—C41.356 (2)C9—C101.395 (3)
N3—C21.366 (3)C10—O41.358 (2)
N3—H30.8600C10—C111.373 (3)
C2—O11.197 (3)C11—C121.385 (3)
C4—O21.211 (2)C11—H110.9300
C4—C51.520 (2)C12—H120.9300
C5—C61.523 (3)C13—O31.424 (2)
C5—H50.9800C13—H13A0.9600
C6—C71.511 (3)C13—H13B0.9600
C6—H6A0.9700C13—H13C0.9600
C6—H6B0.9700O4—H4A0.8200
C7—C121.370 (3)O5—H5A0.82 (5)
C7—C81.399 (3)O5—H5B0.85 (3)
C8—C91.382 (3)
C2—S1—C592.79 (9)C9—C8—C7120.60 (17)
C4—N3—C2118.11 (16)C9—C8—H8119.7
C4—N3—H3120.9C7—C8—H8119.7
C2—N3—H3120.9O3—C9—C8125.52 (16)
O1—C2—N3123.5 (2)O3—C9—C10114.77 (15)
O1—C2—S1125.58 (18)C8—C9—C10119.71 (17)
N3—C2—S1110.93 (15)O4—C10—C11124.07 (17)
O2—C4—N3124.38 (17)O4—C10—C9116.61 (16)
O2—C4—C5123.37 (17)C11—C10—C9119.31 (17)
N3—C4—C5112.25 (16)C10—C11—C12120.76 (18)
C4—C5—C6112.19 (15)C10—C11—H11119.6
C4—C5—S1105.90 (13)C12—C11—H11119.6
C6—C5—S1113.61 (13)C7—C12—C11120.64 (19)
C4—C5—H5108.3C7—C12—H12119.7
C6—C5—H5108.3C11—C12—H12119.7
S1—C5—H5108.3O3—C13—H13A109.5
C7—C6—C5112.25 (15)O3—C13—H13B109.5
C7—C6—H6A109.2H13A—C13—H13B109.5
C5—C6—H6A109.2O3—C13—H13C109.5
C7—C6—H6B109.2H13A—C13—H13C109.5
C5—C6—H6B109.2H13B—C13—H13C109.5
H6A—C6—H6B107.9C9—O3—C13118.00 (15)
C12—C7—C8118.92 (18)C10—O4—H4A109.5
C12—C7—C6120.66 (18)H5A—O5—H5B98 (3)
C8—C7—C6120.40 (17)
D—H···AD—HH···AD···AD—H···A
N3—H3···O2i0.862.032.886 (2)174.
O4—H4A···O5ii0.821.872.685 (2)171.
O5—H5A···O30.82 (5)2.19 (5)2.962 (2)156 (4)
O5—H5A···O40.82 (5)2.37 (4)2.947 (2)127 (4)
O5—H5B···O1iii0.85 (3)1.97 (3)2.795 (3)163 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3⋯O2i0.862.032.886 (2)174
O4—H4A⋯O5ii0.821.872.685 (2)171
O5—H5A⋯O30.82 (5)2.19 (5)2.962 (2)156 (4)
O5—H5A⋯O40.82 (5)2.37 (4)2.947 (2)127 (4)
O5—H5B⋯O1iii0.85 (3)1.97 (3)2.795 (3)163 (3)

Symmetry codes: (i) ; (ii) ; (iii) .

  5 in total

Review 1.  Thiazolidinediones: a new class of antidiabetic drugs.

Authors:  C Day
Journal:  Diabet Med       Date:  1999-03       Impact factor: 4.359

2.  Synthesis and biological activity of novel pyrimidinone containing thiazolidinedione derivatives.

Authors:  Gurram R Madhavan; Ranjan Chakrabarti; Reeba K Vikramadithyan; Rao N V S Mamidi; V Balraju; B M Rajesh; Parimal Misra; Sunil K B Kumar; Braj B Lohray; Vidya B Lohray; Ramanujam Rajagopalan
Journal:  Bioorg Med Chem       Date:  2002-08       Impact factor: 3.641

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 4.  PPAR-gamma: adipogenic regulator and thiazolidinedione receptor.

Authors:  B M Spiegelman
Journal:  Diabetes       Date:  1998-04       Impact factor: 9.461

5.  Antiulcer activity of 5-benzylthiazolidine-2,4-dione derivatives.

Authors:  T Sohda; K Mizuno; T Hirata; Y Maki; Y Kawamatsu
Journal:  Chem Pharm Bull (Tokyo)       Date:  1983-02       Impact factor: 1.645

  5 in total

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