Literature DB >> 21522652

3-{(E)-[(4-Formyl-phen-yl)iminium-yl]meth-yl}naphthalen-2-olate.

Abeer Mohamed Farag, Siang Guan Teoh, Hasnah Osman, Madhukar Hemamalini, Hoong-Kun Fun.   

Abstract

The title Schiff base compound, C(18)H(13)NO(2), is a zwitterion, with the naphthol hy-droxy group deprotonated and the imine N atom protonated. It adopts an E configuration about the central C=N double bond. The dihedral angle between the naphthyl ring system and the benzene ring is 1.73 (11)°. An intra-molecular N-H⋯O hydrogen bond generates an S(6) ring motif. In the crystal, adjacent mol-ecules are connected by inter-molecular C-H⋯O hydrogen bonds, forming a supra-molecular ribbon along the b axis.

Entities:  

Year:  2010        PMID: 21522652      PMCID: PMC3050369          DOI: 10.1107/S1600536810051822

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For details and applications of condensation reactions, see: Alsalim et al. (2010 ▶); Wadher et al. (2009 ▶); Abou-Melha & Faruk (2008 ▶); Sondhi et al. (2006 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C18H13NO2 M = 275.29 Monoclinic, a = 7.3685 (8) Å b = 12.7437 (13) Å c = 14.4586 (15) Å β = 91.979 (7)° V = 1356.9 (2) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 296 K 0.86 × 0.08 × 0.07 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.928, T max = 0.994 11574 measured reflections 2394 independent reflections 1416 reflections with I > 2σ(I) R int = 0.054

Refinement

R[F 2 > 2σ(F 2)] = 0.064 wR(F 2) = 0.171 S = 1.04 2394 reflections 194 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.13 e Å−3 Δρmin = −0.23 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810051822/is2641sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810051822/is2641Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H13NO2F(000) = 576
Mr = 275.29Dx = 1.348 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2561 reflections
a = 7.3685 (8) Åθ = 3.2–30.0°
b = 12.7437 (13) ŵ = 0.09 mm1
c = 14.4586 (15) ÅT = 296 K
β = 91.979 (7)°Needle, orange
V = 1356.9 (2) Å30.86 × 0.08 × 0.07 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer2394 independent reflections
Radiation source: fine-focus sealed tube1416 reflections with I > 2σ(I)
graphiteRint = 0.054
φ and ω scansθmax = 25.0°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −8→8
Tmin = 0.928, Tmax = 0.994k = −15→14
11574 measured reflectionsl = −16→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.064Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.171H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0799P)2 + 0.244P] where P = (Fo2 + 2Fc2)/3
2394 reflections(Δ/σ)max = 0.001
194 parametersΔρmax = 0.13 e Å3
0 restraintsΔρmin = −0.23 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.6211 (3)−0.00216 (15)0.67024 (13)0.0694 (7)
O20.9842 (4)−0.31405 (18)0.16917 (18)0.0913 (8)
N10.7418 (3)−0.02531 (16)0.50829 (17)0.0496 (6)
C10.6323 (4)0.0967 (2)0.65940 (19)0.0527 (7)
C20.5864 (4)0.1658 (2)0.73351 (19)0.0578 (8)
H20.54960.13730.78900.069*
C30.5952 (4)0.2702 (2)0.72465 (19)0.0563 (8)
H30.56340.31190.77430.068*
C40.6515 (4)0.3201 (2)0.64209 (19)0.0503 (7)
C50.6622 (4)0.4289 (2)0.6367 (2)0.0673 (9)
H40.63020.46920.68720.081*
C60.7185 (5)0.4774 (2)0.5590 (2)0.0804 (11)
H50.72550.55020.55640.096*
C70.7654 (5)0.4169 (2)0.4837 (2)0.0752 (10)
H60.80340.44960.43020.090*
C80.7564 (4)0.3100 (2)0.4871 (2)0.0587 (8)
H70.78840.27120.43560.070*
C90.7000 (3)0.25724 (19)0.56633 (17)0.0450 (7)
C100.6907 (3)0.14332 (19)0.57427 (17)0.0448 (7)
C110.7430 (3)0.07881 (19)0.50285 (18)0.0463 (7)
H11A0.78070.10980.44850.056*
C120.7929 (3)−0.09668 (18)0.44023 (18)0.0440 (7)
C130.7754 (4)−0.20274 (19)0.46048 (19)0.0524 (7)
H13A0.7329−0.22360.51750.063*
C140.8209 (4)−0.2768 (2)0.39614 (19)0.0537 (7)
H14A0.8092−0.34760.41040.064*
C150.8834 (3)−0.24824 (19)0.31103 (18)0.0455 (7)
C160.9013 (4)−0.1417 (2)0.29133 (19)0.0534 (7)
H16A0.9443−0.12120.23440.064*
C170.8566 (4)−0.0671 (2)0.35455 (18)0.0513 (7)
H17A0.86880.00370.34030.062*
C180.9279 (4)−0.3289 (2)0.2450 (2)0.0625 (8)
H18A0.9115−0.39820.26290.075*
H1N10.698 (4)−0.048 (2)0.570 (2)0.086 (10)*
U11U22U33U12U13U23
O10.0902 (17)0.0565 (13)0.0634 (14)0.0048 (11)0.0285 (12)0.0080 (10)
O20.116 (2)0.0838 (16)0.0757 (17)−0.0014 (13)0.0242 (15)−0.0122 (12)
N10.0528 (15)0.0482 (14)0.0486 (15)0.0021 (10)0.0130 (12)−0.0011 (11)
C10.0472 (18)0.0561 (18)0.0552 (18)0.0041 (13)0.0085 (14)0.0025 (14)
C20.0542 (19)0.074 (2)0.0461 (17)−0.0002 (15)0.0125 (14)−0.0011 (14)
C30.053 (2)0.065 (2)0.0511 (18)0.0029 (14)0.0072 (15)−0.0126 (14)
C40.0432 (17)0.0557 (17)0.0520 (17)0.0027 (12)0.0037 (14)−0.0088 (13)
C50.080 (2)0.0574 (19)0.065 (2)0.0052 (15)0.0082 (18)−0.0145 (15)
C60.115 (3)0.0487 (18)0.078 (2)0.0010 (17)0.016 (2)−0.0039 (17)
C70.104 (3)0.055 (2)0.068 (2)0.0024 (17)0.0191 (19)0.0091 (16)
C80.072 (2)0.0506 (18)0.0543 (18)0.0065 (14)0.0099 (16)−0.0014 (13)
C90.0373 (16)0.0488 (15)0.0487 (16)0.0020 (11)0.0018 (13)−0.0020 (12)
C100.0379 (16)0.0494 (16)0.0475 (16)0.0032 (11)0.0058 (13)−0.0001 (12)
C110.0440 (16)0.0482 (16)0.0470 (16)0.0035 (12)0.0053 (13)0.0025 (12)
C120.0374 (16)0.0447 (15)0.0500 (17)0.0019 (11)0.0053 (13)−0.0008 (12)
C130.0563 (19)0.0534 (17)0.0479 (16)0.0013 (13)0.0088 (14)0.0058 (13)
C140.0603 (19)0.0427 (15)0.0581 (18)0.0008 (12)0.0048 (15)−0.0005 (13)
C150.0385 (16)0.0478 (15)0.0501 (17)0.0002 (12)0.0022 (13)−0.0032 (12)
C160.0525 (19)0.0583 (18)0.0500 (17)−0.0030 (13)0.0124 (14)−0.0004 (13)
C170.0570 (18)0.0440 (15)0.0539 (17)−0.0007 (12)0.0152 (14)0.0032 (12)
C180.071 (2)0.0581 (18)0.059 (2)−0.0023 (15)0.0134 (17)−0.0067 (14)
O1—C11.272 (3)C7—H60.9300
O2—C181.201 (3)C8—C91.404 (4)
N1—C111.329 (3)C8—H70.9300
N1—C121.401 (3)C9—C101.458 (3)
N1—H1N11.00 (3)C10—C111.385 (3)
C1—C21.437 (4)C11—H11A0.9300
C1—C101.446 (3)C12—C131.390 (3)
C2—C31.338 (4)C12—C171.392 (3)
C2—H20.9300C13—C141.374 (4)
C3—C41.427 (4)C13—H13A0.9300
C3—H30.9300C14—C151.378 (4)
C4—C51.390 (4)C14—H14A0.9300
C4—C91.413 (3)C15—C161.394 (3)
C5—C61.359 (4)C15—C181.448 (4)
C5—H40.9300C16—C171.367 (3)
C6—C71.389 (4)C16—H16A0.9300
C6—H50.9300C17—H17A0.9300
C7—C81.364 (4)C18—H18A0.9300
C11—N1—C12127.2 (2)C4—C9—C10119.3 (2)
C11—N1—H1N1110.3 (17)C11—C10—C1119.3 (2)
C12—N1—H1N1122.6 (17)C11—C10—C9121.2 (2)
O1—C1—C2119.8 (2)C1—C10—C9119.5 (2)
O1—C1—C10122.3 (2)N1—C11—C10123.1 (2)
C2—C1—C10117.9 (2)N1—C11—H11A118.5
C3—C2—C1121.7 (3)C10—C11—H11A118.5
C3—C2—H2119.2C13—C12—C17119.2 (2)
C1—C2—H2119.2C13—C12—N1117.0 (2)
C2—C3—C4122.7 (3)C17—C12—N1123.8 (2)
C2—C3—H3118.7C14—C13—C12119.9 (2)
C4—C3—H3118.7C14—C13—H13A120.1
C5—C4—C9120.3 (3)C12—C13—H13A120.1
C5—C4—C3120.7 (3)C13—C14—C15121.4 (2)
C9—C4—C3119.0 (2)C13—C14—H14A119.3
C6—C5—C4121.3 (3)C15—C14—H14A119.3
C6—C5—H4119.3C14—C15—C16118.4 (2)
C4—C5—H4119.3C14—C15—C18119.5 (2)
C5—C6—C7119.1 (3)C16—C15—C18122.1 (3)
C5—C6—H5120.5C17—C16—C15120.9 (2)
C7—C6—H5120.5C17—C16—H16A119.5
C8—C7—C6120.9 (3)C15—C16—H16A119.5
C8—C7—H6119.6C16—C17—C12120.2 (2)
C6—C7—H6119.6C16—C17—H17A119.9
C7—C8—C9121.6 (3)C12—C17—H17A119.9
C7—C8—H7119.2O2—C18—C15125.7 (3)
C9—C8—H7119.2O2—C18—H18A117.2
C8—C9—C4116.8 (2)C15—C18—H18A117.2
C8—C9—C10123.9 (2)
O1—C1—C2—C3−179.6 (3)C4—C9—C10—C11−177.8 (2)
C10—C1—C2—C30.6 (4)C8—C9—C10—C1179.4 (3)
C1—C2—C3—C4−0.4 (4)C4—C9—C10—C1−0.1 (3)
C2—C3—C4—C5−178.7 (3)C12—N1—C11—C10−179.6 (2)
C2—C3—C4—C90.0 (4)C1—C10—C11—N10.2 (4)
C9—C4—C5—C60.2 (5)C9—C10—C11—N1177.9 (2)
C3—C4—C5—C6178.9 (3)C11—N1—C12—C13−178.2 (2)
C4—C5—C6—C70.3 (5)C11—N1—C12—C170.8 (4)
C5—C6—C7—C8−0.3 (5)C17—C12—C13—C140.0 (4)
C6—C7—C8—C9−0.1 (5)N1—C12—C13—C14179.1 (2)
C7—C8—C9—C40.6 (4)C12—C13—C14—C15−0.3 (4)
C7—C8—C9—C10−179.0 (3)C13—C14—C15—C160.5 (4)
C5—C4—C9—C8−0.6 (4)C13—C14—C15—C18−179.4 (3)
C3—C4—C9—C8−179.3 (2)C14—C15—C16—C17−0.5 (4)
C5—C4—C9—C10178.9 (2)C18—C15—C16—C17179.3 (3)
C3—C4—C9—C100.2 (4)C15—C16—C17—C120.3 (4)
O1—C1—C10—C11−2.4 (4)C13—C12—C17—C160.0 (4)
C2—C1—C10—C11177.4 (2)N1—C12—C17—C16−179.1 (2)
O1—C1—C10—C9179.8 (2)C14—C15—C18—O2−179.6 (3)
C2—C1—C10—C9−0.3 (4)C16—C15—C18—O20.5 (5)
C8—C9—C10—C111.7 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1N1···O11.00 (3)1.68 (3)2.551 (3)143 (2)
C8—H7···O2i0.932.543.399 (4)153
C17—H17A···O2i0.932.573.453 (4)159
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N1⋯O11.00 (3)1.68 (3)2.551 (3)143 (2)
C8—H7⋯O2i0.932.543.399 (4)153
C17—H17A⋯O2i0.932.573.453 (4)159

Symmetry code: (i) .

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