Literature DB >> 21522642

2-Chloro-N'-[4-(dimethyl-amino)-benzyl-idene]-N-[4-(3-methyl-3-phenyl-cyclo-but-yl)-1,3-thia-zol-2-yl]acetohydrazide.

Ersin Inkaya, Muharrem Dinçer, Alaaddin Cukurovalı, Engin Yılmaz.   

Abstract

The mol-ecular conformation of the title compound, C(25)H(27)ClN(4)OS, is stabilized by an intra-molecular benzyl-idine C-H⋯N(thia-zole) hydrogen bond. The thiazole ring makes dihedral angles of 12.0 (3) and 20.4 (2)°, respectively, with the phenyl and benzene rings, while the phenyl and benzene rings make a dihedral angle of 22.6 (2)°. The crystal packing involves weak inter-molecular thia-zole C-H⋯O(carbon-yl) and methyl C-H⋯π hydrogen-bonding associations.

Entities:  

Year:  2010        PMID: 21522642      PMCID: PMC3050246          DOI: 10.1107/S1600536810049962

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of related compounds, see: Brown et al. (1974 ▶); Dehmlow & Schmidt (1990 ▶); Foerster et al. (1979) ▶; Roger et al. (1977 ▶); Sawhney et al. (1978) ▶; Slip et al. (1974) ▶; Suzuki et al. (1979) ▶. For background to Schiff bases, see: Costamagna et al. (1992 ▶); Fita et al. (2005 ▶); Sridharan et al. (2004 ▶). For related structures, see: Dinçer et al. (2004 ▶); Demir et al. (2006 ▶); Özdemir et al. (2004 ▶); Soylu et al. (2005 ▶); Xu et al. (1994 ▶). For bond-length data, see: Allen (1984 ▶).

Experimental

Crystal data

C25H27ClN4OS M = 467.02 Monoclinic, a = 9.0194 (5) Å b = 26.7946 (11) Å c = 13.1773 (7) Å β = 132.054 (3)° V = 2364.6 (2) Å3 Z = 4 Mo Kα radiation μ = 0.28 mm−1 T = 296 K 0.62 × 0.36 × 0.02 mm

Data collection

Stoe IPDS 2 CCD diffractometer Absorption correction: integration (X-RED32; Stoe & Cie, 2002 ▶) T min = 0.533, T max = 0.896 22742 measured reflections 4446 independent reflections 2250 reflections with I > 2σ(I) R int = 0.143

Refinement

R[F 2 > 2σ(F 2)] = 0.070 wR(F 2) = 0.121 S = 1.01 4446 reflections 292 parameters H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.17 e Å−3 Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810049962/zs2082sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810049962/zs2082Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C25H27ClN4OSF(000) = 984
Mr = 467.02Dx = 1.312 Mg m3
Monoclinic, P21/cMelting point: 420 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 9.0194 (5) ÅCell parameters from 14801 reflections
b = 26.7946 (11) Åθ = 1.5–26.2°
c = 13.1773 (7) ŵ = 0.28 mm1
β = 132.054 (3)°T = 296 K
V = 2364.6 (2) Å3Plate, brown
Z = 40.62 × 0.36 × 0.02 mm
Stoe IPDS 2 CCD diffractometer4446 independent reflections
Radiation source: fine-focus sealed tube2250 reflections with I > 2σ(I)
graphiteRint = 0.143
Detector resolution: 6.67 pixels mm-1θmax = 25.6°, θmin = 1.5°
rotation method scansh = −10→10
Absorption correction: integration (X-RED32; Stoe & Cie, 2002)k = −32→32
Tmin = 0.533, Tmax = 0.896l = −16→16
22742 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.070Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.121H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0287P)2] where P = (Fo2 + 2Fc2)/3
4446 reflections(Δ/σ)max < 0.001
292 parametersΔρmax = 0.19 e Å3
0 restraintsΔρmin = −0.17 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.45265 (18)0.13475 (4)0.49349 (10)0.0796 (4)
N10.2748 (4)0.14808 (12)−0.0565 (3)0.0585 (9)
N20.3574 (4)0.12803 (12)0.1519 (3)0.0563 (8)
N30.3105 (4)0.07697 (12)0.1292 (3)0.0552 (8)
N40.1455 (6)−0.15632 (14)−0.0154 (4)0.0862 (12)
O10.4501 (5)0.18872 (11)0.3042 (3)0.0788 (9)
S10.43474 (18)0.22208 (4)0.11117 (10)0.0743 (4)
C1−0.1810 (5)0.05376 (17)−0.5909 (3)0.0609 (11)
H1−0.17770.0674−0.65420.073*
C2−0.2743 (6)0.00874 (17)−0.6195 (4)0.0700 (12)
H2−0.3308−0.0079−0.70040.084*
C3−0.2841 (6)−0.01176 (17)−0.5289 (5)0.0764 (13)
H3−0.3498−0.0419−0.54880.092*
C4−0.1959 (6)0.01272 (18)−0.4082 (4)0.0755 (13)
H4−0.2012−0.0011−0.34600.091*
C5−0.1001 (6)0.05746 (17)−0.3794 (4)0.0661 (11)
H5−0.03960.0733−0.29700.079*
C6−0.0916 (5)0.07958 (15)−0.4710 (3)0.0529 (10)
C70.0148 (5)0.12898 (15)−0.4359 (3)0.0572 (10)
C8−0.0100 (6)0.15109 (18)−0.5534 (4)0.0809 (14)
H8A0.06090.1822−0.52490.121*
H8B−0.14910.1567−0.63050.121*
H8C0.04270.1283−0.57860.121*
C90.2381 (5)0.13060 (16)−0.3001 (3)0.0628 (11)
H9A0.27540.1036−0.23770.075*
H9B0.33090.1330−0.31380.075*
C10−0.0258 (5)0.16916 (15)−0.3724 (4)0.0661 (11)
H10A−0.08080.1557−0.33520.079*
H10B−0.10510.1970−0.43300.079*
C110.2018 (5)0.18072 (15)−0.2618 (3)0.0617 (11)
H110.23690.2089−0.28960.074*
C120.2851 (5)0.18755 (15)−0.1199 (3)0.0596 (11)
C130.3684 (6)0.22920 (15)−0.0435 (4)0.0731 (12)
H130.38750.2584−0.07160.088*
C140.3471 (5)0.16094 (14)0.0637 (3)0.0543 (10)
C150.4014 (5)0.14549 (16)0.2682 (3)0.0563 (10)
C160.3891 (6)0.10708 (15)0.3459 (3)0.0599 (11)
H16A0.47990.07980.37310.072*
H16B0.25470.09370.28770.072*
C170.3002 (5)0.05152 (15)0.0428 (4)0.0593 (11)
H170.31850.0671−0.01120.071*
C180.2602 (5)−0.00161 (14)0.0285 (3)0.0507 (9)
C190.2467 (6)−0.02964 (16)−0.0652 (3)0.0650 (12)
H190.2626−0.0139−0.12030.078*
C200.2104 (6)−0.08041 (16)−0.0799 (4)0.0677 (12)
H200.2008−0.0977−0.14530.081*
C210.2381 (5)−0.02730 (16)0.1094 (3)0.0607 (11)
H210.2465−0.00970.17400.073*
C220.2044 (6)−0.07735 (16)0.0970 (4)0.0646 (11)
H220.1921−0.09290.15410.077*
C230.1877 (5)−0.10629 (16)0.0009 (4)0.0597 (11)
C240.1179 (8)−0.18412 (18)−0.1206 (5)0.1007 (17)
H24A0.0632−0.2163−0.13010.151*
H24B0.2443−0.1881−0.09610.151*
H24C0.0279−0.1664−0.20560.151*
C250.1709 (7)−0.18470 (19)0.0877 (5)0.1005 (17)
H25A0.3076−0.18280.17200.151*
H25B0.1362−0.21890.05930.151*
H25C0.0859−0.17140.10080.151*
U11U22U33U12U13U23
Cl10.1198 (9)0.0642 (8)0.0901 (7)0.0022 (7)0.0849 (7)−0.0016 (6)
N10.0693 (19)0.050 (2)0.0533 (17)−0.0062 (16)0.0399 (16)−0.0047 (15)
N20.070 (2)0.041 (2)0.0609 (18)−0.0027 (16)0.0450 (17)−0.0051 (15)
N30.0614 (19)0.0405 (19)0.0599 (18)−0.0059 (15)0.0391 (16)−0.0039 (15)
N40.133 (3)0.040 (2)0.096 (3)−0.015 (2)0.081 (3)−0.0071 (19)
O10.124 (2)0.048 (2)0.0852 (18)−0.0129 (18)0.0785 (18)−0.0124 (15)
S10.1041 (8)0.0462 (7)0.0685 (6)−0.0156 (6)0.0561 (6)−0.0103 (5)
C10.057 (2)0.065 (3)0.054 (2)0.004 (2)0.0342 (19)0.000 (2)
C20.061 (3)0.058 (3)0.069 (3)0.001 (2)0.034 (2)−0.011 (2)
C30.067 (3)0.048 (3)0.096 (3)−0.001 (2)0.047 (3)0.004 (2)
C40.083 (3)0.071 (3)0.079 (3)0.002 (3)0.057 (3)0.016 (2)
C50.076 (3)0.064 (3)0.062 (2)−0.001 (2)0.048 (2)0.004 (2)
C60.052 (2)0.059 (3)0.053 (2)0.007 (2)0.0370 (19)0.0055 (18)
C70.060 (2)0.058 (3)0.0501 (19)−0.003 (2)0.0356 (19)0.0014 (18)
C80.087 (3)0.083 (4)0.065 (2)−0.016 (3)0.048 (2)0.008 (2)
C90.063 (2)0.067 (3)0.056 (2)−0.003 (2)0.039 (2)−0.0031 (19)
C100.071 (3)0.053 (3)0.065 (2)−0.001 (2)0.042 (2)0.003 (2)
C110.069 (3)0.052 (3)0.057 (2)−0.009 (2)0.039 (2)0.0017 (18)
C120.064 (2)0.050 (3)0.055 (2)−0.008 (2)0.035 (2)0.0020 (18)
C130.098 (3)0.043 (3)0.069 (2)−0.017 (2)0.052 (2)−0.0034 (19)
C140.058 (2)0.042 (2)0.054 (2)−0.0026 (18)0.0336 (19)−0.0028 (17)
C150.064 (2)0.052 (3)0.060 (2)0.002 (2)0.044 (2)−0.0001 (19)
C160.071 (3)0.053 (3)0.066 (2)0.005 (2)0.050 (2)−0.0013 (18)
C170.070 (3)0.045 (3)0.062 (2)0.000 (2)0.045 (2)0.0029 (19)
C180.055 (2)0.041 (2)0.0541 (19)0.0010 (18)0.0355 (18)−0.0001 (17)
C190.089 (3)0.051 (3)0.058 (2)−0.001 (2)0.051 (2)−0.0007 (19)
C200.099 (3)0.048 (3)0.065 (2)−0.001 (2)0.059 (2)−0.0039 (19)
C210.072 (3)0.053 (3)0.063 (2)−0.007 (2)0.048 (2)−0.0086 (19)
C220.078 (3)0.054 (3)0.069 (2)−0.010 (2)0.052 (2)−0.001 (2)
C230.062 (2)0.048 (3)0.062 (2)−0.002 (2)0.038 (2)−0.0016 (19)
C240.133 (4)0.051 (3)0.114 (4)−0.012 (3)0.081 (3)−0.015 (3)
C250.127 (4)0.065 (4)0.111 (3)−0.012 (3)0.081 (3)0.012 (3)
Cl1—C161.779 (3)C9—C111.545 (5)
N1—C141.292 (4)C9—H9A0.9700
N1—C121.389 (5)C9—H9B0.9700
N2—C151.382 (4)C10—C111.558 (5)
N2—N31.404 (4)C10—H10A0.9700
N2—C141.412 (5)C10—H10B0.9700
N3—C171.276 (4)C11—C121.487 (5)
N4—C231.371 (5)C11—H110.9800
N4—C251.435 (5)C12—C131.345 (5)
N4—C241.441 (6)C13—H130.9300
O1—C151.217 (4)C15—C161.508 (5)
S1—C131.707 (4)C16—H16A0.9700
S1—C141.743 (4)C16—H16B0.9700
C1—C21.371 (6)C17—C181.450 (5)
C1—C61.385 (5)C17—H170.9300
C1—H10.9300C18—C191.379 (5)
C2—C31.370 (6)C18—C211.392 (5)
C2—H20.9300C19—C201.382 (5)
C3—C41.378 (6)C19—H190.9300
C3—H30.9300C20—C231.396 (5)
C4—C51.374 (6)C20—H200.9300
C4—H40.9300C21—C221.360 (5)
C5—C61.392 (5)C21—H210.9300
C5—H50.9300C22—C231.405 (5)
C6—C71.514 (5)C22—H220.9300
C7—C81.528 (5)C24—H24A0.9600
C7—C101.550 (5)C24—H24B0.9600
C7—C91.560 (5)C24—H24C0.9600
C8—H8A0.9600C25—H25A0.9600
C8—H8B0.9600C25—H25B0.9600
C8—H8C0.9600C25—H25C0.9600
C14—N1—C12110.6 (3)C12—C11—H11110.9
C15—N2—N3112.8 (3)C9—C11—H11110.9
C15—N2—C14120.9 (3)C10—C11—H11110.9
N3—N2—C14126.1 (3)C13—C12—N1114.2 (3)
C17—N3—N2122.9 (3)C13—C12—C11127.0 (4)
C23—N4—C25121.3 (4)N1—C12—C11118.8 (3)
C23—N4—C24120.5 (4)C12—C13—S1112.0 (3)
C25—N4—C24116.9 (4)C12—C13—H13124.0
C13—S1—C1487.95 (19)S1—C13—H13124.0
C2—C1—C6122.3 (4)N1—C14—N2122.9 (3)
C2—C1—H1118.9N1—C14—S1115.2 (3)
C6—C1—H1118.9N2—C14—S1121.8 (3)
C3—C2—C1119.9 (4)O1—C15—N2121.0 (4)
C3—C2—H2120.0O1—C15—C16123.8 (3)
C1—C2—H2120.0N2—C15—C16115.2 (3)
C2—C3—C4119.4 (4)C15—C16—Cl1110.0 (3)
C2—C3—H3120.3C15—C16—H16A109.7
C4—C3—H3120.3Cl1—C16—H16A109.7
C5—C4—C3120.3 (4)C15—C16—H16B109.7
C5—C4—H4119.9Cl1—C16—H16B109.7
C3—C4—H4119.9H16A—C16—H16B108.2
C4—C5—C6121.5 (4)N3—C17—C18120.2 (4)
C4—C5—H5119.3N3—C17—H17119.9
C6—C5—H5119.3C18—C17—H17119.9
C1—C6—C5116.6 (4)C19—C18—C21116.4 (4)
C1—C6—C7123.4 (3)C19—C18—C17121.1 (4)
C5—C6—C7120.0 (3)C21—C18—C17122.5 (4)
C6—C7—C8113.4 (3)C18—C19—C20122.1 (4)
C6—C7—C10116.2 (3)C18—C19—H19118.9
C8—C7—C10110.5 (4)C20—C19—H19118.9
C6—C7—C9116.2 (3)C19—C20—C23121.6 (4)
C8—C7—C9110.6 (3)C19—C20—H20119.2
C10—C7—C987.2 (3)C23—C20—H20119.2
C7—C8—H8A109.5C22—C21—C18122.0 (4)
C7—C8—H8B109.5C22—C21—H21119.0
H8A—C8—H8B109.5C18—C21—H21119.0
C7—C8—H8C109.5C21—C22—C23122.2 (4)
H8A—C8—H8C109.5C21—C22—H22118.9
H8B—C8—H8C109.5C23—C22—H22118.9
C11—C9—C790.3 (3)N4—C23—C20122.3 (4)
C11—C9—H9A113.6N4—C23—C22122.1 (4)
C7—C9—H9A113.6C20—C23—C22115.6 (4)
C11—C9—H9B113.6N4—C24—H24A109.5
C7—C9—H9B113.6N4—C24—H24B109.5
H9A—C9—H9B110.9H24A—C24—H24B109.5
C7—C10—C1190.2 (3)N4—C24—H24C109.5
C7—C10—H10A113.6H24A—C24—H24C109.5
C11—C10—H10A113.6H24B—C24—H24C109.5
C7—C10—H10B113.6N4—C25—H25A109.5
C11—C10—H10B113.6N4—C25—H25B109.5
H10A—C10—H10B110.9H25A—C25—H25B109.5
C12—C11—C9118.6 (3)N4—C25—H25C109.5
C12—C11—C10116.1 (3)H25A—C25—H25C109.5
C9—C11—C1087.5 (3)H25B—C25—H25C109.5
C15—N2—N3—C17−167.2 (3)C11—C12—C13—S1177.2 (3)
C14—N2—N3—C1718.0 (5)C14—S1—C13—C120.9 (3)
C6—C1—C2—C31.1 (6)C12—N1—C14—N2−179.4 (3)
C1—C2—C3—C4−1.4 (7)C12—N1—C14—S1−0.1 (4)
C2—C3—C4—C50.5 (7)C15—N2—C14—N1−168.1 (4)
C3—C4—C5—C60.9 (7)N3—N2—C14—N16.4 (6)
C2—C1—C6—C50.2 (6)C15—N2—C14—S112.6 (5)
C2—C1—C6—C7179.1 (4)N3—N2—C14—S1−172.9 (3)
C4—C5—C6—C1−1.2 (6)C13—S1—C14—N1−0.5 (3)
C4—C5—C6—C7179.8 (4)C13—S1—C14—N2178.8 (3)
C1—C6—C7—C87.8 (5)N3—N2—C15—O1178.1 (4)
C5—C6—C7—C8−173.3 (4)C14—N2—C15—O1−6.8 (6)
C1—C6—C7—C10137.5 (4)N3—N2—C15—C16−0.4 (4)
C5—C6—C7—C10−43.6 (5)C14—N2—C15—C16174.7 (3)
C1—C6—C7—C9−122.0 (4)O1—C15—C16—Cl10.7 (5)
C5—C6—C7—C956.8 (5)N2—C15—C16—Cl1179.2 (3)
C6—C7—C9—C11−134.4 (3)N2—N3—C17—C18177.1 (3)
C8—C7—C9—C1194.4 (4)N3—C17—C18—C19179.4 (3)
C10—C7—C9—C11−16.5 (3)N3—C17—C18—C21−2.1 (6)
C6—C7—C10—C11134.3 (3)C21—C18—C19—C200.9 (6)
C8—C7—C10—C11−94.7 (3)C17—C18—C19—C20179.5 (4)
C9—C7—C10—C1116.3 (3)C18—C19—C20—C23−0.8 (6)
C7—C9—C11—C12134.9 (3)C19—C18—C21—C22−0.1 (6)
C7—C9—C11—C1016.4 (3)C17—C18—C21—C22−178.7 (4)
C7—C10—C11—C12−137.2 (3)C18—C21—C22—C23−0.7 (6)
C7—C10—C11—C9−16.5 (3)C25—N4—C23—C20164.4 (4)
C14—N1—C12—C130.8 (5)C24—N4—C23—C20−1.5 (7)
C14—N1—C12—C11−177.7 (3)C25—N4—C23—C22−17.7 (7)
C9—C11—C12—C13140.8 (4)C24—N4—C23—C22176.3 (4)
C10—C11—C12—C13−117.0 (5)C19—C20—C23—N4177.9 (4)
C9—C11—C12—N1−40.9 (5)C19—C20—C23—C220.0 (6)
C10—C11—C12—N161.3 (5)C21—C22—C23—N4−177.2 (4)
N1—C12—C13—S1−1.2 (5)C21—C22—C23—C200.8 (6)
D—H···AD—HH···AD···AD—H···A
C17—H17···N10.932.212.838 (5)124.
C13—H13···O1i0.932.503.374 (5)157.
C16—H16A···Cg1ii0.972.573.493159
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C17—H17⋯N10.932.212.838 (5)124
C13—H13⋯O1i0.932.503.374 (5)157
C16—H16ACg1ii0.972.573.493159

Symmetry codes: (i) ; (ii) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Nonsteroidal antiinflammatory agents. 1.2,4-Diphenylthiazole-5-acetic acid and related compounds.

Authors:  K Brown; D P Cater; J F Cavalla; D Green; R A Newberry; A B Wilson
Journal:  J Med Chem       Date:  1974-11       Impact factor: 7.446

3.  Synthesis of antimicrobial agents. I. Synthesis and antimicrobial activities of thiazoloquinoline derivatives.

Authors:  N Suzuki; Y Tanaka; R Dohmori
Journal:  Chem Pharm Bull (Tokyo)       Date:  1979-01       Impact factor: 1.645

4.  Antiparasitic 5-nitrothiazoles and 5-nitro-4-thiazolines. 4.

Authors:  P J Islip; M D Closier; M C Neville
Journal:  J Med Chem       Date:  1974-02       Impact factor: 7.446

5.  4-Bromo-2-[[4-(3-mesityl-3-methylcyclobutyl)thiazol-2-yl]hydrazonomethyl]phenol, with N-H...N, C-H...pi and pi-pi interactions.

Authors:  Mustafa Serkan Soylu; Nezihe Calişkan; Alaaddin Cukurovali; Ibrahim Yilmaz; Orhan Büyükgüngör
Journal:  Acta Crystallogr C       Date:  2005-11-30       Impact factor: 1.172

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total
  1 in total

1.  Crystal structure and Hirshfeld surface analysis of (Z)-4-{[4-(3-methyl-3-phenyl-cyclo-but-yl)thia-zol-2-yl]amino}-4-oxobut-2-enoic acid.

Authors:  Okan Simsek; Muharrem Dincer; Necmi Dege; Eiad Saif; Ibrahim Yilmaz; Alaaddin Cukurovali
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2022-01-07
  1 in total

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